RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 KRTAP25-1Q3LHN0 102 aa4.43□□□□□ -1.7
SOX6-213ENST00000530378 K7ERS5 55 aa4.4□□□□□ -1.7
SOX6-213ENST00000530378 LUZP6Q538Z0 58 aa4.38□□□□□ -1.71
SOX6-213ENST00000530378 PRO2289Q9P1D8 64 aa4.38□□□□□ -1.71
SOX6-213ENST00000530378 NEBP20929 6669 aa4.35□□□□□ -1.71
SOX6-213ENST00000530378 C10orf95Q9H7T3 257 aa4.32□□□□□ -1.72
SOX6-213ENST00000530378 NDUFAF8A1L188 74 aa4.29□□□□□ -1.72
SOX6-213ENST00000530378 KRTAP10-7P60409 375 aaPredicted RBP4.29□□□□□ -1.72
SOX6-213ENST00000530378 KMT2DO14686 5537 aa4.29□□□□□ -1.72
SOX6-213ENST00000530378 MUC12Q9UKN1 5478 aa4.29□□□□□ -1.72
SOX6-213ENST00000530378 KRTAP2-3P0C7H8 128 aa4.21□□□□□ -1.74
SOX6-213ENST00000530378 KRTAP2-4Q9BYR9 128 aa4.21□□□□□ -1.74
SOX6-213ENST00000530378 TNP1P09430 55 aa4.19□□□□□ -1.74
SOX6-213ENST00000530378 KRTAP10-12P60413 245 aa4.19□□□□□ -1.74
SOX6-213ENST00000530378 KRTAP5-9P26371 169 aa4.11□□□□□ -1.75
SOX6-213ENST00000530378 LCE3AQ5TA76 89 aa4.11□□□□□ -1.75
SOX6-213ENST00000530378 MDN1Q9NU22 5596 aa4.1□□□□□ -1.75
SOX6-213ENST00000530378 KRTAP8-1Q8IUC2 63 aa4.09□□□□□ -1.75
SOX6-213ENST00000530378 KRTAP2-2Q9BYT5 123 aa4.05□□□□□ -1.76
SOX6-213ENST00000530378 KRTAP2-1Q9BYU5 128 aa4.05□□□□□ -1.76
SOX6-213ENST00000530378 LCE1AQ5T7P2 110 aa4.04□□□□□ -1.76
SOX6-213ENST00000530378 SPRR2FQ96RM1 72 aa4.02□□□□□ -1.77
SOX6-213ENST00000530378 KRTAP19-5Q3LI72 72 aa4□□□□□ -1.77
SOX6-213ENST00000530378 KRTAP19-7Q3SYF9 63 aa3.97□□□□□ -1.77
SOX6-213ENST00000530378 GPR98Q8WXG9 6306 aa3.96□□□□□ -1.78
SOX6-213ENST00000530378 MT1EP04732 61 aa3.91□□□□□ -1.78
SOX6-213ENST00000530378 SPRR2EP22531 72 aa3.91□□□□□ -1.78
SOX6-213ENST00000530378 SPRR2BP35325 72 aa3.91□□□□□ -1.78
SOX6-213ENST00000530378 SPRR2AP35326 72 aa3.91□□□□□ -1.78
SOX6-213ENST00000530378 KRTAP12-3P60328 96 aa3.91□□□□□ -1.78
SOX6-213ENST00000530378 PP632Q6XCG6 107 aa3.9□□□□□ -1.79
SOX6-213ENST00000530378 MT1LQ93083 61 aa3.8□□□□□ -1.8
SOX6-213ENST00000530378 SPRR2DP22532 72 aa3.79□□□□□ -1.8
SOX6-213ENST00000530378 KRTAP19-3Q7Z4W3 81 aa3.79□□□□□ -1.8
SOX6-213ENST00000530378 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.77□□□□□ -1.81
SOX6-213ENST00000530378 MT1GP13640 62 aa3.7□□□□□ -1.82
SOX6-213ENST00000530378 MT1MQ8N339 61 aa3.7□□□□□ -1.82
SOX6-213ENST00000530378 KRTAP4-3Q9BYR4 195 aa3.68□□□□□ -1.82
SOX6-213ENST00000530378 DSTQ03001 7570 aaKnown RBP3.66□□□□□ -1.82
SOX6-213ENST00000530378 MT3P25713 68 aa3.66□□□□□ -1.82
SOX6-213ENST00000530378 KRTAP5-11Q6L8G4 156 aa3.65□□□□□ -1.82
SOX6-213ENST00000530378 LCE3CQ5T5A8 94 aa3.63□□□□□ -1.83
SOX6-213ENST00000530378 INE1O15225 51 aa3.6□□□□□ -1.83
SOX6-213ENST00000530378 KRTAP5-10Q6L8G5 202 aa3.52□□□□□ -1.85
SOX6-213ENST00000530378 KRTAP9-6A8MVA2 160 aa3.47□□□□□ -1.85
SOX6-213ENST00000530378 KRTAP5-7Q6L8G8 165 aa3.47□□□□□ -1.85
SOX6-213ENST00000530378 AHNAK2Q8IVF2 5795 aa3.47□□□□□ -1.85
SOX6-213ENST00000530378 HMCN1Q96RW7 5635 aa3.46□□□□□ -1.85
SOX6-213ENST00000530378 LCE1EQ5T753 118 aa3.42□□□□□ -1.86
SOX6-213ENST00000530378 SPRR5A0A1B0GTR4 108 aa3.39□□□□□ -1.87
SOX6-213ENST00000530378 LCE1FQ5T754 118 aa3.36□□□□□ -1.87
SOX6-213ENST00000530378 MT4P47944 62 aa3.35□□□□□ -1.87
SOX6-213ENST00000530378 KRTAP5-5Q701N2 237 aaPredicted RBP3.33□□□□□ -1.88
SOX6-213ENST00000530378 SYNE1Q8NF91 8797 aaKnown RBP3.27□□□□□ -1.89
SOX6-213ENST00000530378 KRTAP5-4Q6L8H1 288 aa3.25□□□□□ -1.89
SOX6-213ENST00000530378 KRTAP6-1Q3LI64 71 aa3.23□□□□□ -1.89
SOX6-213ENST00000530378 MT1AP04731 61 aa3.21□□□□□ -1.89
SOX6-213ENST00000530378 KRTAP5-1Q6L8H4 278 aa3.2□□□□□ -1.9
SOX6-213ENST00000530378 KRTAP12-4P60329 112 aa3.14□□□□□ -1.91
SOX6-213ENST00000530378 KRTAP20-2Q3LI61 65 aa3.08□□□□□ -1.92
SOX6-213ENST00000530378 KRTAP4-4Q9BYR3 166 aa3.07□□□□□ -1.92
SOX6-213ENST00000530378 AHNAKQ09666 5890 aaKnown RBP3.03□□□□□ -1.92
SOX6-213ENST00000530378 KRTAP6-2Q3LI66 62 aa3.01□□□□□ -1.93
SOX6-213ENST00000530378 MUC5ACP98088 5654 aa2.97□□□□□ -1.93
SOX6-213ENST00000530378 KRTAP5-2Q701N4 177 aa2.92□□□□□ -1.94
SOX6-213ENST00000530378 MUC5BQ9HC84 5762 aaPredicted RBP2.92□□□□□ -1.94
SOX6-213ENST00000530378 OBSCNQ5VST9 7968 aa2.87□□□□□ -1.95
SOX6-213ENST00000530378 LCE3EQ5T5B0 92 aa2.85□□□□□ -1.95
SOX6-213ENST00000530378 KRTAP5-8O75690 187 aa2.84□□□□□ -1.95
SOX6-213ENST00000530378 LCE3DQ9BYE3 92 aa2.7□□□□□ -1.98
SOX6-213ENST00000530378 LCE1BQ5T7P3 118 aa2.49□□□□□ -2.01
SOX6-213ENST00000530378 LCE1CQ5T751 118 aa2.37□□□□□ -2.03
SOX6-213ENST00000530378 PRM1P04553 51 aa2.22□□□□□ -2.05
SOX6-213ENST00000530378 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
SOX6-213ENST00000530378 PHGR1C9JFL3 82 aa2.07□□□□□ -2.08
SOX6-213ENST00000530378 MUC19Q7Z5P9 8384 aa1.95□□□□□ -2.1
SOX6-213ENST00000530378 KRTAP21-1Q3LI58 79 aa1.6□□□□□ -2.15
SOX6-213ENST00000530378 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 1124.7 ms