RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 NDUFAF8A1L188 74 aa3.05□□□□□ -1.92
SSBP3-211ENST00000528787 KRTAP5-9P26371 169 aa3.05□□□□□ -1.92
SSBP3-211ENST00000528787 KRTAP15-1Q3LI76 137 aa3.05□□□□□ -1.92
SSBP3-211ENST00000528787 GPR98Q8WXG9 6306 aa3.04□□□□□ -1.92
SSBP3-211ENST00000528787 SPRR2FQ96RM1 72 aa3.03□□□□□ -1.92
SSBP3-211ENST00000528787 LCE1DQ5T752 114 aa2.99□□□□□ -1.93
SSBP3-211ENST00000528787 KRTAP19-4Q3LI73 84 aa2.98□□□□□ -1.93
SSBP3-211ENST00000528787 LCE3AQ5TA76 89 aa2.98□□□□□ -1.93
SSBP3-211ENST00000528787 KRTAP4-7Q9BYR0 210 aa2.95□□□□□ -1.94
SSBP3-211ENST00000528787 KMT2DO14686 5537 aa2.95□□□□□ -1.94
SSBP3-211ENST00000528787 KRTAP12-3P60328 96 aa2.94□□□□□ -1.94
SSBP3-211ENST00000528787 SPRR2EP22531 72 aa2.93□□□□□ -1.94
SSBP3-211ENST00000528787 SPRR2BP35325 72 aa2.93□□□□□ -1.94
SSBP3-211ENST00000528787 SPRR2AP35326 72 aa2.93□□□□□ -1.94
SSBP3-211ENST00000528787 LCE4AQ5TA78 99 aa2.93□□□□□ -1.94
SSBP3-211ENST00000528787 KRTAP19-5Q3LI72 72 aa2.92□□□□□ -1.94
SSBP3-211ENST00000528787 LCE1AQ5T7P2 110 aa2.92□□□□□ -1.94
SSBP3-211ENST00000528787 MT1EP04732 61 aa2.91□□□□□ -1.94
SSBP3-211ENST00000528787 KRTAP19-7Q3SYF9 63 aa2.91□□□□□ -1.94
SSBP3-211ENST00000528787 KRTAP4-9Q9BYQ8 210 aa2.9□□□□□ -1.95
SSBP3-211ENST00000528787 MUC12Q9UKN1 5478 aa2.88□□□□□ -1.95
SSBP3-211ENST00000528787 MT1GP13640 62 aa2.88□□□□□ -1.95
SSBP3-211ENST00000528787 KRTAP19-3Q7Z4W3 81 aa2.87□□□□□ -1.95
SSBP3-211ENST00000528787 SPRR2DP22532 72 aa2.84□□□□□ -1.95
SSBP3-211ENST00000528787 MDN1Q9NU22 5596 aa2.82□□□□□ -1.96
SSBP3-211ENST00000528787 LCE5AQ5TCM9 118 aa2.82□□□□□ -1.96
SSBP3-211ENST00000528787 KRTAP20-1Q3LI63 56 aa2.81□□□□□ -1.96
SSBP3-211ENST00000528787 MT1LQ93083 61 aa2.81□□□□□ -1.96
SSBP3-211ENST00000528787 KRTAP4-2Q9BYR5 136 aa2.81□□□□□ -1.96
SSBP3-211ENST00000528787 KRTAP4-11Q9BYQ6 195 aa2.8□□□□□ -1.96
SSBP3-211ENST00000528787 KRTAP2-3P0C7H8 128 aa2.79□□□□□ -1.96
SSBP3-211ENST00000528787 KRTAP2-4Q9BYR9 128 aa2.79□□□□□ -1.96
SSBP3-211ENST00000528787 MT1MQ8N339 61 aa2.75□□□□□ -1.97
SSBP3-211ENST00000528787 LCE3CQ5T5A8 94 aa2.72□□□□□ -1.97
SSBP3-211ENST00000528787 KRTAP2-2Q9BYT5 123 aa2.71□□□□□ -1.98
SSBP3-211ENST00000528787 KRTAP2-1Q9BYU5 128 aa2.71□□□□□ -1.98
SSBP3-211ENST00000528787 DSTQ03001 7570 aaKnown RBP2.67□□□□□ -1.98
SSBP3-211ENST00000528787 INE1O15225 51 aa2.64□□□□□ -1.99
SSBP3-211ENST00000528787 KRTAP4-3Q9BYR4 195 aa2.57□□□□□ -2
SSBP3-211ENST00000528787 AHNAK2Q8IVF2 5795 aa2.54□□□□□ -2
SSBP3-211ENST00000528787 SPRR5A0A1B0GTR4 108 aa2.5□□□□□ -2.01
SSBP3-211ENST00000528787 KRTAP12-4P60329 112 aa2.49□□□□□ -2.01
SSBP3-211ENST00000528787 KRTAP5-4Q6L8H1 288 aa2.49□□□□□ -2.01
SSBP3-211ENST00000528787 KRTAP5-5Q701N2 237 aaPredicted RBP2.48□□□□□ -2.01
SSBP3-211ENST00000528787 KRTAP5-3Q6L8H2 238 aa2.46□□□□□ -2.02
SSBP3-211ENST00000528787 MT1AP04731 61 aa2.44□□□□□ -2.02
SSBP3-211ENST00000528787 KRTAP9-6A8MVA2 160 aa2.43□□□□□ -2.02
SSBP3-211ENST00000528787 MT4P47944 62 aa2.41□□□□□ -2.02
SSBP3-211ENST00000528787 HMCN1Q96RW7 5635 aa2.38□□□□□ -2.03
SSBP3-211ENST00000528787 KRTAP6-1Q3LI64 71 aa2.34□□□□□ -2.03
SSBP3-211ENST00000528787 KRTAP5-10Q6L8G5 202 aa2.34□□□□□ -2.03
SSBP3-211ENST00000528787 KRTAP20-2Q3LI61 65 aa2.33□□□□□ -2.04
SSBP3-211ENST00000528787 AHNAKQ09666 5890 aaKnown RBP2.32□□□□□ -2.04
SSBP3-211ENST00000528787 SYNE1Q8NF91 8797 aaKnown RBP2.32□□□□□ -2.04
SSBP3-211ENST00000528787 KRTAP5-7Q6L8G8 165 aa2.31□□□□□ -2.04
SSBP3-211ENST00000528787 MUC5BQ9HC84 5762 aaPredicted RBP2.29□□□□□ -2.04
SSBP3-211ENST00000528787 MT3P25713 68 aa2.27□□□□□ -2.05
SSBP3-211ENST00000528787 KRTAP6-2Q3LI66 62 aa2.21□□□□□ -2.06
SSBP3-211ENST00000528787 KRTAP5-2Q701N4 177 aa2.21□□□□□ -2.06
SSBP3-211ENST00000528787 MUC5ACP98088 5654 aa2.15□□□□□ -2.07
SSBP3-211ENST00000528787 OBSCNQ5VST9 7968 aa2.06□□□□□ -2.08
SSBP3-211ENST00000528787 LCE3DQ9BYE3 92 aa2.05□□□□□ -2.08
SSBP3-211ENST00000528787 LCE1EQ5T753 118 aa2.03□□□□□ -2.08
SSBP3-211ENST00000528787 KRTAP5-8O75690 187 aa1.97□□□□□ -2.09
SSBP3-211ENST00000528787 LCE3EQ5T5B0 92 aa1.97□□□□□ -2.09
SSBP3-211ENST00000528787 KRTAP5-1Q6L8H4 278 aa1.92□□□□□ -2.1
SSBP3-211ENST00000528787 KRTAP5-11Q6L8G4 156 aa1.88□□□□□ -2.11
SSBP3-211ENST00000528787 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.88□□□□□ -2.11
SSBP3-211ENST00000528787 LCE1CQ5T751 118 aa1.87□□□□□ -2.11
SSBP3-211ENST00000528787 LCE1BQ5T7P3 118 aa1.87□□□□□ -2.11
SSBP3-211ENST00000528787 LCE1FQ5T754 118 aa1.81□□□□□ -2.12
SSBP3-211ENST00000528787 PRM1P04553 51 aa1.57□□□□□ -2.16
SSBP3-211ENST00000528787 KRTAP4-4Q9BYR3 166 aa1.55□□□□□ -2.16
SSBP3-211ENST00000528787 KRTAP21-2Q3LI59 83 aa1.54□□□□□ -2.16
SSBP3-211ENST00000528787 PHGR1C9JFL3 82 aa1.41□□□□□ -2.18
SSBP3-211ENST00000528787 MUC19Q7Z5P9 8384 aa1.23□□□□□ -2.21
SSBP3-211ENST00000528787 KRTAP21-1Q3LI58 79 aa1.12□□□□□ -2.23
SSBP3-211ENST00000528787 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 76.8 ms