RNA–Protein interactions for RNA: ENST00000525964.6

NCAPD3-203, Transcript of non-SMC condensin II complex subunit D3, humanhuman

TSL 1 (best)

Gene NCAPD3, Length 5,025 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-203ENST00000525964 MUC2Q02817 5179 aa4.58□□□□□ -1.68
NCAPD3-203ENST00000525964 MT3P25713 68 aa4.57□□□□□ -1.68
NCAPD3-203ENST00000525964 MT1MQ8N339 61 aa4.57□□□□□ -1.68
NCAPD3-203ENST00000525964 FLGP20930 4061 aaPredicted RBP4.51□□□□□ -1.69
NCAPD3-203ENST00000525964 MT4P47944 62 aa4.49□□□□□ -1.69
NCAPD3-203ENST00000525964 UBR4Q5T4S7 5183 aa4.47□□□□□ -1.69
NCAPD3-203ENST00000525964 LCE2AQ5TA79 106 aaPredicted RBP4.42□□□□□ -1.7
NCAPD3-203ENST00000525964 FAT4Q6V0I7 4981 aa4.4□□□□□ -1.71
NCAPD3-203ENST00000525964 KRTAP9-6A0A140TA67 174 aa4.37□□□□□ -1.71
NCAPD3-203ENST00000525964 RNF213Q63HN8 5207 aa4.35□□□□□ -1.71
NCAPD3-203ENST00000525964 FSIP2Q5CZC0 6907 aa4.35□□□□□ -1.71
NCAPD3-203ENST00000525964 LOC100996750A0A140TA64 210 aa4.33□□□□□ -1.72
NCAPD3-203ENST00000525964 KRTAP4-3Q9BYR4 195 aa4.33□□□□□ -1.72
NCAPD3-203ENST00000525964 LCE1BQ5T7P3 118 aa4.32□□□□□ -1.72
NCAPD3-203ENST00000525964 LCE1DQ5T752 114 aa4.31□□□□□ -1.72
NCAPD3-203ENST00000525964 KRTAP19-7Q3SYF9 63 aa4.3□□□□□ -1.72
NCAPD3-203ENST00000525964 HMCN2Q8NDA2 5059 aa4.29□□□□□ -1.72
NCAPD3-203ENST00000525964 MT1AP04731 61 aa4.29□□□□□ -1.72
NCAPD3-203ENST00000525964 PRM1P04553 51 aa4.25□□□□□ -1.73
NCAPD3-203ENST00000525964 OBSCNQ5VST9 7968 aa4.21□□□□□ -1.74
NCAPD3-203ENST00000525964 LCE1AQ5T7P2 110 aa4.2□□□□□ -1.74
NCAPD3-203ENST00000525964 KRTAP20-1Q3LI63 56 aa4.18□□□□□ -1.74
NCAPD3-203ENST00000525964 KRTAP9-7A8MTY7 169 aa4.15□□□□□ -1.74
NCAPD3-203ENST00000525964 KRTAP2-3P0C7H8 128 aa4.14□□□□□ -1.75
NCAPD3-203ENST00000525964 KRTAP2-4Q9BYR9 128 aa4.14□□□□□ -1.75
NCAPD3-203ENST00000525964 KRTAP2-1Q9BYU5 128 aa4.14□□□□□ -1.75
NCAPD3-203ENST00000525964 KRTAP6-3Q3LI67 103 aa4.13□□□□□ -1.75
NCAPD3-203ENST00000525964 SYNE2Q8WXH0 6885 aaKnown RBP4.12□□□□□ -1.75
NCAPD3-203ENST00000525964 LCE5AQ5TCM9 118 aa4.06□□□□□ -1.76
NCAPD3-203ENST00000525964 KRTAP4-9Q9BYQ8 210 aa4.01□□□□□ -1.77
NCAPD3-203ENST00000525964 LCE4AQ5TA78 99 aa3.98□□□□□ -1.77
NCAPD3-203ENST00000525964 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.97□□□□□ -1.77
NCAPD3-203ENST00000525964 KRTAP2-2Q9BYT5 123 aa3.94□□□□□ -1.78
NCAPD3-203ENST00000525964 KRTAP6-1Q3LI64 71 aa3.93□□□□□ -1.78
NCAPD3-203ENST00000525964 KRTAP6-2Q3LI66 62 aa3.92□□□□□ -1.78
NCAPD3-203ENST00000525964 KRTAP9-4Q9BYQ2 154 aa3.91□□□□□ -1.78
NCAPD3-203ENST00000525964 USH2AO75445 5202 aa3.86□□□□□ -1.79
NCAPD3-203ENST00000525964 KMT2DO14686 5537 aa3.84□□□□□ -1.8
NCAPD3-203ENST00000525964 KRTAP9-6A8MVA2 160 aa3.82□□□□□ -1.8
NCAPD3-203ENST00000525964 DSTQ03001 7570 aaKnown RBP3.75□□□□□ -1.81
NCAPD3-203ENST00000525964 MACF1Q9UPN3 7388 aaKnown RBP3.75□□□□□ -1.81
NCAPD3-203ENST00000525964 FCGBPQ9Y6R7 5405 aaPredicted RBP3.72□□□□□ -1.81
NCAPD3-203ENST00000525964 LCE1CQ5T751 118 aa3.7□□□□□ -1.82
NCAPD3-203ENST00000525964 LCE1EQ5T753 118 aa3.7□□□□□ -1.82
NCAPD3-203ENST00000525964 LCE1FQ5T754 118 aa3.7□□□□□ -1.82
NCAPD3-203ENST00000525964 KRTAP9-9Q9BYP9 154 aa3.49□□□□□ -1.85
NCAPD3-203ENST00000525964 GPR98Q8WXG9 6306 aa3.49□□□□□ -1.85
NCAPD3-203ENST00000525964 MUC19Q7Z5P9 8384 aa3.49□□□□□ -1.85
NCAPD3-203ENST00000525964 NEBP20929 6669 aa3.47□□□□□ -1.85
NCAPD3-203ENST00000525964 KRTAP5-9P26371 169 aa3.46□□□□□ -1.86
NCAPD3-203ENST00000525964 SSPOA2VEC9 5147 aa3.46□□□□□ -1.86
NCAPD3-203ENST00000525964 MDN1Q9NU22 5596 aa3.42□□□□□ -1.86
NCAPD3-203ENST00000525964 MUC12Q9UKN1 5478 aa3.41□□□□□ -1.86
NCAPD3-203ENST00000525964 KRTAP4-6Q9BYQ5 205 aa3.28□□□□□ -1.88
NCAPD3-203ENST00000525964 KRTAP20-2Q3LI61 65 aa3.28□□□□□ -1.88
NCAPD3-203ENST00000525964 KRTAP4-11Q9BYQ6 195 aa3.12□□□□□ -1.91
NCAPD3-203ENST00000525964 KRTAP5-4Q6L8H1 288 aa3.04□□□□□ -1.92
NCAPD3-203ENST00000525964 KRTAP4-12Q9BQ66 201 aa2.93□□□□□ -1.94
NCAPD3-203ENST00000525964 KRTAP4-2Q9BYR5 136 aa2.93□□□□□ -1.94
NCAPD3-203ENST00000525964 KRTAP4-4Q9BYR3 166 aa2.92□□□□□ -1.94
NCAPD3-203ENST00000525964 KRTAP5-5Q701N2 237 aaPredicted RBP2.85□□□□□ -1.95
NCAPD3-203ENST00000525964 MUC5ACP98088 5654 aa2.77□□□□□ -1.97
NCAPD3-203ENST00000525964 AHNAK2Q8IVF2 5795 aa2.74□□□□□ -1.97
NCAPD3-203ENST00000525964 HMCN1Q96RW7 5635 aa2.72□□□□□ -1.97
NCAPD3-203ENST00000525964 KRTAP5-3Q6L8H2 238 aa2.71□□□□□ -1.97
NCAPD3-203ENST00000525964 KRTAP5-8O75690 187 aa2.46□□□□□ -2.02
NCAPD3-203ENST00000525964 KRTAP5-2Q701N4 177 aa2.32□□□□□ -2.04
NCAPD3-203ENST00000525964 KRTAP5-10Q6L8G5 202 aa2.31□□□□□ -2.04
NCAPD3-203ENST00000525964 AHNAKQ09666 5890 aaKnown RBP2.26□□□□□ -2.05
NCAPD3-203ENST00000525964 PHGR1C9JFL3 82 aa2.26□□□□□ -2.05
NCAPD3-203ENST00000525964 MUC5BQ9HC84 5762 aaPredicted RBP2.24□□□□□ -2.05
NCAPD3-203ENST00000525964 KRTAP5-11Q6L8G4 156 aa2.17□□□□□ -2.06
NCAPD3-203ENST00000525964 KRTAP5-1Q6L8H4 278 aa2.05□□□□□ -2.08
NCAPD3-203ENST00000525964 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
NCAPD3-203ENST00000525964 KRTAP21-1Q3LI58 79 aa1.9□□□□□ -2.11
NCAPD3-203ENST00000525964 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.86□□□□□ -2.11
NCAPD3-203ENST00000525964 KRTAP5-7Q6L8G8 165 aa1.75□□□□□ -2.13
NCAPD3-203ENST00000525964 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 84.1 ms