RNA–Protein interactions for RNA: ENST00000524463.5

CTSC-203, Transcript of cathepsin C, humanhuman

TSL 1 (best) BASIC

Gene CTSC, Length 6,125 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-203ENST00000524463 MT3P25713 68 aa3.22□□□□□ -1.89
CTSC-203ENST00000524463 KRTAP19-6Q3LI70 58 aa3.22□□□□□ -1.89
CTSC-203ENST00000524463 SYNE2Q8WXH0 6885 aaKnown RBP3.21□□□□□ -1.9
CTSC-203ENST00000524463 LCE5AQ5TCM9 118 aa3.21□□□□□ -1.9
CTSC-203ENST00000524463 KRTAP4-9Q9BYQ8 210 aa3.2□□□□□ -1.9
CTSC-203ENST00000524463 KMT2CQ8NEZ4 4911 aaKnown RBP3.17□□□□□ -1.9
CTSC-203ENST00000524463 FSIP2Q5CZC0 6907 aa3.17□□□□□ -1.9
CTSC-203ENST00000524463 KRTAP20-1Q3LI63 56 aa3.16□□□□□ -1.9
CTSC-203ENST00000524463 MUC17Q685J3 4493 aa3.15□□□□□ -1.9
CTSC-203ENST00000524463 KRTAP19-2Q3LHN2 52 aa3.14□□□□□ -1.91
CTSC-203ENST00000524463 FLGP20930 4061 aaPredicted RBP3.11□□□□□ -1.91
CTSC-203ENST00000524463 EPPK1P58107 5090 aaKnown RBP3.07□□□□□ -1.92
CTSC-203ENST00000524463 KRTAP9-7A8MTY7 169 aa3.07□□□□□ -1.92
CTSC-203ENST00000524463 LCE1CQ5T751 118 aa3□□□□□ -1.93
CTSC-203ENST00000524463 LCE1EQ5T753 118 aa3□□□□□ -1.93
CTSC-203ENST00000524463 LCE1FQ5T754 118 aa3□□□□□ -1.93
CTSC-203ENST00000524463 LCE1AQ5T7P2 110 aa3□□□□□ -1.93
CTSC-203ENST00000524463 MT1AP04731 61 aa2.95□□□□□ -1.94
CTSC-203ENST00000524463 ABCA13Q86UQ4 5058 aa2.94□□□□□ -1.94
CTSC-203ENST00000524463 KRTAP2-3P0C7H8 128 aa2.94□□□□□ -1.94
CTSC-203ENST00000524463 KRTAP2-4Q9BYR9 128 aa2.94□□□□□ -1.94
CTSC-203ENST00000524463 KRTAP2-1Q9BYU5 128 aa2.94□□□□□ -1.94
CTSC-203ENST00000524463 KRTAP6-2Q3LI66 62 aa2.94□□□□□ -1.94
CTSC-203ENST00000524463 KRTAP19-7Q3SYF9 63 aa2.94□□□□□ -1.94
CTSC-203ENST00000524463 LCE2AQ5TA79 106 aaPredicted RBP2.92□□□□□ -1.94
CTSC-203ENST00000524463 FAT4Q6V0I7 4981 aa2.9□□□□□ -1.94
CTSC-203ENST00000524463 MUC2Q02817 5179 aa2.89□□□□□ -1.95
CTSC-203ENST00000524463 KRTAP6-1Q3LI64 71 aa2.89□□□□□ -1.95
CTSC-203ENST00000524463 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.89□□□□□ -1.95
CTSC-203ENST00000524463 HMCN2Q8NDA2 5059 aa2.87□□□□□ -1.95
CTSC-203ENST00000524463 KRTAP6-3Q3LI67 103 aa2.84□□□□□ -1.96
CTSC-203ENST00000524463 RNF213Q63HN8 5207 aa2.83□□□□□ -1.96
CTSC-203ENST00000524463 UBR4Q5T4S7 5183 aa2.8□□□□□ -1.96
CTSC-203ENST00000524463 KRTAP9-4Q9BYQ2 154 aa2.79□□□□□ -1.96
CTSC-203ENST00000524463 KRTAP2-2Q9BYT5 123 aa2.77□□□□□ -1.97
CTSC-203ENST00000524463 LCE4AQ5TA78 99 aa2.74□□□□□ -1.97
CTSC-203ENST00000524463 SYNE1Q8NF91 8797 aaKnown RBP2.71□□□□□ -1.98
CTSC-203ENST00000524463 KRTAP9-6A8MVA2 160 aa2.7□□□□□ -1.98
CTSC-203ENST00000524463 OBSCNQ5VST9 7968 aa2.65□□□□□ -1.99
CTSC-203ENST00000524463 KRTAP9-9Q9BYP9 154 aa2.61□□□□□ -1.99
CTSC-203ENST00000524463 KMT2DO14686 5537 aa2.51□□□□□ -2.01
CTSC-203ENST00000524463 KRTAP4-6Q9BYQ5 205 aa2.49□□□□□ -2.01
CTSC-203ENST00000524463 KRTAP4-11Q9BYQ6 195 aa2.47□□□□□ -2.01
CTSC-203ENST00000524463 KRTAP20-2Q3LI61 65 aa2.47□□□□□ -2.01
CTSC-203ENST00000524463 KRTAP4-4Q9BYR3 166 aa2.47□□□□□ -2.01
CTSC-203ENST00000524463 KRTAP4-12Q9BQ66 201 aa2.45□□□□□ -2.02
CTSC-203ENST00000524463 KRTAP4-2Q9BYR5 136 aa2.45□□□□□ -2.02
CTSC-203ENST00000524463 DSTQ03001 7570 aaKnown RBP2.45□□□□□ -2.02
CTSC-203ENST00000524463 USH2AO75445 5202 aa2.45□□□□□ -2.02
CTSC-203ENST00000524463 FCGBPQ9Y6R7 5405 aaPredicted RBP2.44□□□□□ -2.02
CTSC-203ENST00000524463 NEBP20929 6669 aa2.44□□□□□ -2.02
CTSC-203ENST00000524463 MACF1Q9UPN3 7388 aaKnown RBP2.43□□□□□ -2.02
CTSC-203ENST00000524463 SSPOA2VEC9 5147 aa2.3□□□□□ -2.04
CTSC-203ENST00000524463 KRTAP5-9P26371 169 aa2.2□□□□□ -2.06
CTSC-203ENST00000524463 MUC12Q9UKN1 5478 aa2.13□□□□□ -2.07
CTSC-203ENST00000524463 KRTAP5-4Q6L8H1 288 aa2.07□□□□□ -2.08
CTSC-203ENST00000524463 MDN1Q9NU22 5596 aa2.02□□□□□ -2.09
CTSC-203ENST00000524463 MUC19Q7Z5P9 8384 aa2.02□□□□□ -2.09
CTSC-203ENST00000524463 KRTAP5-5Q701N2 237 aaPredicted RBP1.94□□□□□ -2.1
CTSC-203ENST00000524463 GPR98Q8WXG9 6306 aa1.89□□□□□ -2.11
CTSC-203ENST00000524463 KRTAP5-3Q6L8H2 238 aa1.87□□□□□ -2.11
CTSC-203ENST00000524463 MUC5ACP98088 5654 aa1.82□□□□□ -2.12
CTSC-203ENST00000524463 PHGR1C9JFL3 82 aa1.81□□□□□ -2.12
CTSC-203ENST00000524463 KRTAP5-8O75690 187 aa1.78□□□□□ -2.12
CTSC-203ENST00000524463 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.72□□□□□ -2.13
CTSC-203ENST00000524463 HMCN1Q96RW7 5635 aa1.67□□□□□ -2.14
CTSC-203ENST00000524463 KRTAP5-2Q701N4 177 aa1.53□□□□□ -2.16
CTSC-203ENST00000524463 KRTAP5-10Q6L8G5 202 aa1.52□□□□□ -2.17
CTSC-203ENST00000524463 AHNAK2Q8IVF2 5795 aa1.51□□□□□ -2.17
CTSC-203ENST00000524463 MUC5BQ9HC84 5762 aaPredicted RBP1.48□□□□□ -2.17
CTSC-203ENST00000524463 KRTAP5-1Q6L8H4 278 aa1.46□□□□□ -2.18
CTSC-203ENST00000524463 AHNAKQ09666 5890 aaKnown RBP1.38□□□□□ -2.19
CTSC-203ENST00000524463 KRTAP5-11Q6L8G4 156 aa1.32□□□□□ -2.2
CTSC-203ENST00000524463 KRTAP21-2Q3LI59 83 aa1.3□□□□□ -2.2
CTSC-203ENST00000524463 KRTAP21-1Q3LI58 79 aa1.14□□□□□ -2.23
CTSC-203ENST00000524463 KRTAP5-7Q6L8G8 165 aa1.07□□□□□ -2.24
CTSC-203ENST00000524463 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 117.8 ms