RNA–Protein interactions for RNA: ENST00000521425.5

TRAM1-205, Transcript of translocation associated membrane protein 1, humanhuman

TSL 2 BASIC

Gene TRAM1, Length 3,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-205ENST00000521425 KRTAP19-7Q3SYF9 63 aa6.15□□□□□ -1.42
TRAM1-205ENST00000521425 MACF1Q9UPN3 7388 aaKnown RBP6.12□□□□□ -1.43
TRAM1-205ENST00000521425 LOC100996750A0A140TA64 210 aa6.09□□□□□ -1.44
TRAM1-205ENST00000521425 MT1GP13640 62 aa5.98□□□□□ -1.45
TRAM1-205ENST00000521425 MT1EP04732 61 aa5.97□□□□□ -1.45
TRAM1-205ENST00000521425 MT1LQ93083 61 aa5.97□□□□□ -1.45
TRAM1-205ENST00000521425 SPRR2FQ96RM1 72 aa5.95□□□□□ -1.46
TRAM1-205ENST00000521425 MDN1Q9NU22 5596 aa5.95□□□□□ -1.46
TRAM1-205ENST00000521425 KRTAP19-6Q3LI70 58 aa5.81□□□□□ -1.48
TRAM1-205ENST00000521425 LCE2DQ5TA82 110 aaPredicted RBP5.8□□□□□ -1.48
TRAM1-205ENST00000521425 KRTAP2-3P0C7H8 128 aa5.73□□□□□ -1.49
TRAM1-205ENST00000521425 KRTAP2-4Q9BYR9 128 aa5.73□□□□□ -1.49
TRAM1-205ENST00000521425 KRTAP2-1Q9BYU5 128 aa5.73□□□□□ -1.49
TRAM1-205ENST00000521425 KRTAP12-4P60329 112 aa5.66□□□□□ -1.5
TRAM1-205ENST00000521425 KRTAP19-3Q7Z4W3 81 aa5.64□□□□□ -1.51
TRAM1-205ENST00000521425 MT1MQ8N339 61 aa5.64□□□□□ -1.51
TRAM1-205ENST00000521425 LCE3BQ5TA77 95 aa5.61□□□□□ -1.51
TRAM1-205ENST00000521425 KRTAP4-9Q9BYQ8 210 aa5.56□□□□□ -1.52
TRAM1-205ENST00000521425 KRTAP9-2Q9BYQ4 174 aa5.53□□□□□ -1.52
TRAM1-205ENST00000521425 SPRR2EP22531 72 aa5.36□□□□□ -1.55
TRAM1-205ENST00000521425 SPRR2BP35325 72 aa5.36□□□□□ -1.55
TRAM1-205ENST00000521425 SPRR2AP35326 72 aa5.36□□□□□ -1.55
TRAM1-205ENST00000521425 LCE5AQ5TCM9 118 aa5.34□□□□□ -1.55
TRAM1-205ENST00000521425 KRTAP6-1Q3LI64 71 aa5.23□□□□□ -1.57
TRAM1-205ENST00000521425 LCE1AQ5T7P2 110 aa5.19□□□□□ -1.58
TRAM1-205ENST00000521425 PRM1P04553 51 aa5.12□□□□□ -1.59
TRAM1-205ENST00000521425 KRTAP9-7A8MTY7 169 aa5.12□□□□□ -1.59
TRAM1-205ENST00000521425 KRTAP19-4Q3LI73 84 aa5.09□□□□□ -1.59
TRAM1-205ENST00000521425 SPRR2DP22532 72 aa5.08□□□□□ -1.6
TRAM1-205ENST00000521425 LCE3DQ9BYE3 92 aa4.96□□□□□ -1.62
TRAM1-205ENST00000521425 MT1AP04731 61 aa4.89□□□□□ -1.63
TRAM1-205ENST00000521425 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.88□□□□□ -1.63
TRAM1-205ENST00000521425 KRTAP6-3Q3LI67 103 aa4.85□□□□□ -1.63
TRAM1-205ENST00000521425 LCE3EQ5T5B0 92 aa4.84□□□□□ -1.63
TRAM1-205ENST00000521425 KRTAP5-9P26371 169 aa4.83□□□□□ -1.64
TRAM1-205ENST00000521425 MT4P47944 62 aa4.82□□□□□ -1.64
TRAM1-205ENST00000521425 KRTAP6-2Q3LI66 62 aa4.81□□□□□ -1.64
TRAM1-205ENST00000521425 KRTAP9-6A0A140TA67 174 aa4.79□□□□□ -1.64
TRAM1-205ENST00000521425 KRTAP5-5Q701N2 237 aaPredicted RBP4.76□□□□□ -1.65
TRAM1-205ENST00000521425 LCE1EQ5T753 118 aa4.69□□□□□ -1.66
TRAM1-205ENST00000521425 KRTAP9-4Q9BYQ2 154 aa4.64□□□□□ -1.67
TRAM1-205ENST00000521425 NEBP20929 6669 aa4.62□□□□□ -1.67
TRAM1-205ENST00000521425 KRTAP4-6Q9BYQ5 205 aa4.6□□□□□ -1.67
TRAM1-205ENST00000521425 KRTAP2-2Q9BYT5 123 aa4.6□□□□□ -1.67
TRAM1-205ENST00000521425 MT3P25713 68 aa4.52□□□□□ -1.69
TRAM1-205ENST00000521425 LCE1DQ5T752 114 aa4.43□□□□□ -1.7
TRAM1-205ENST00000521425 HMCN1Q96RW7 5635 aa4.42□□□□□ -1.7
TRAM1-205ENST00000521425 MUC19Q7Z5P9 8384 aa4.27□□□□□ -1.73
TRAM1-205ENST00000521425 LCE1BQ5T7P3 118 aa4.23□□□□□ -1.73
TRAM1-205ENST00000521425 KRTAP20-2Q3LI61 65 aa4.16□□□□□ -1.74
TRAM1-205ENST00000521425 MUC5ACP98088 5654 aa4.16□□□□□ -1.74
TRAM1-205ENST00000521425 KRTAP5-4Q6L8H1 288 aa4.06□□□□□ -1.76
TRAM1-205ENST00000521425 KRTAP20-1Q3LI63 56 aa3.94□□□□□ -1.78
TRAM1-205ENST00000521425 LCE4AQ5TA78 99 aa3.94□□□□□ -1.78
TRAM1-205ENST00000521425 KRTAP4-11Q9BYQ6 195 aa3.91□□□□□ -1.78
TRAM1-205ENST00000521425 LCE1FQ5T754 118 aa3.82□□□□□ -1.8
TRAM1-205ENST00000521425 KRTAP5-3Q6L8H2 238 aa3.74□□□□□ -1.81
TRAM1-205ENST00000521425 KRTAP5-2Q701N4 177 aa3.73□□□□□ -1.81
TRAM1-205ENST00000521425 MUC5BQ9HC84 5762 aaPredicted RBP3.7□□□□□ -1.82
TRAM1-205ENST00000521425 AHNAK2Q8IVF2 5795 aa3.63□□□□□ -1.83
TRAM1-205ENST00000521425 KRTAP4-4Q9BYR3 166 aa3.6□□□□□ -1.83
TRAM1-205ENST00000521425 KRTAP4-12Q9BQ66 201 aa3.48□□□□□ -1.85
TRAM1-205ENST00000521425 KRTAP4-2Q9BYR5 136 aa3.48□□□□□ -1.85
TRAM1-205ENST00000521425 KRTAP5-10Q6L8G5 202 aa3.41□□□□□ -1.86
TRAM1-205ENST00000521425 KRTAP5-1Q6L8H4 278 aa3.39□□□□□ -1.87
TRAM1-205ENST00000521425 GPR98Q8WXG9 6306 aa3.29□□□□□ -1.88
TRAM1-205ENST00000521425 KRTAP5-8O75690 187 aa3.26□□□□□ -1.89
TRAM1-205ENST00000521425 LCE1CQ5T751 118 aa3.25□□□□□ -1.89
TRAM1-205ENST00000521425 KRTAP21-2Q3LI59 83 aa3.18□□□□□ -1.9
TRAM1-205ENST00000521425 KRTAP21-1Q3LI58 79 aa2.97□□□□□ -1.93
TRAM1-205ENST00000521425 KRTAP9-9Q9BYP9 154 aa2.96□□□□□ -1.94
TRAM1-205ENST00000521425 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.81□□□□□ -1.96
TRAM1-205ENST00000521425 KRTAP5-11Q6L8G4 156 aa2.76□□□□□ -1.97
TRAM1-205ENST00000521425 AHNAKQ09666 5890 aaKnown RBP2.74□□□□□ -1.97
TRAM1-205ENST00000521425 KRTAP5-7Q6L8G8 165 aa2.7□□□□□ -1.98
TRAM1-205ENST00000521425 PHGR1C9JFL3 82 aa2.47□□□□□ -2.01
TRAM1-205ENST00000521425 MUC16Q8WXI7 14507 aa1.63□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 71.9 ms