RNA–Protein interactions for RNA: ENST00000519622.5

PABPC1-212, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-212ENST00000519622 FAT4Q6V0I7 4981 aa1.98□□□□□ -2.09
PABPC1-212ENST00000519622 K7ERS5 55 aa1.98□□□□□ -2.09
PABPC1-212ENST00000519622 SPINT4Q6UDR6 99 aa1.98□□□□□ -2.09
PABPC1-212ENST00000519622 MT1HP80294 61 aa1.97□□□□□ -2.09
PABPC1-212ENST00000519622 R4GN34 69 aa1.96□□□□□ -2.1
PABPC1-212ENST00000519622 MT2AP02795 61 aa1.95□□□□□ -2.1
PABPC1-212ENST00000519622 MT1FP04733 61 aa1.95□□□□□ -2.1
PABPC1-212ENST00000519622 SPRR2GQ9BYE4 73 aa1.95□□□□□ -2.1
PABPC1-212ENST00000519622 LCE1CQ5T751 118 aa1.93□□□□□ -2.1
PABPC1-212ENST00000519622 LCE1BQ5T7P3 118 aa1.93□□□□□ -2.1
PABPC1-212ENST00000519622 KRTAP19-8Q3LI54 63 aa1.91□□□□□ -2.1
PABPC1-212ENST00000519622 LCE3DQ9BYE3 92 aa1.91□□□□□ -2.1
PABPC1-212ENST00000519622 MT1BP07438 61 aa1.9□□□□□ -2.11
PABPC1-212ENST00000519622 MT1XP80297 61 aa1.85□□□□□ -2.11
PABPC1-212ENST00000519622 HMCN1Q96RW7 5635 aa1.83□□□□□ -2.12
PABPC1-212ENST00000519622 CAMK2N1Q7Z7J9 78 aa1.83□□□□□ -2.12
PABPC1-212ENST00000519622 SPRR5A0A1B0GTR4 108 aa1.82□□□□□ -2.12
PABPC1-212ENST00000519622 KRTAP10-10P60014 251 aa1.82□□□□□ -2.12
PABPC1-212ENST00000519622 PP632Q6XCG6 107 aa1.81□□□□□ -2.12
PABPC1-212ENST00000519622 USH2AO75445 5202 aa1.8□□□□□ -2.12
PABPC1-212ENST00000519622 M0R2T5 61 aa1.79□□□□□ -2.12
PABPC1-212ENST00000519622 TNP1P09430 55 aa1.79□□□□□ -2.12
PABPC1-212ENST00000519622 KRTAP8-1Q8IUC2 63 aa1.78□□□□□ -2.12
PABPC1-212ENST00000519622 PLAC4Q8WY50 150 aa1.78□□□□□ -2.12
PABPC1-212ENST00000519622 KRTAP5-8O75690 187 aa1.74□□□□□ -2.13
PABPC1-212ENST00000519622 SSPOA2VEC9 5147 aa1.73□□□□□ -2.13
PABPC1-212ENST00000519622 KRTAP12-3P60328 96 aa1.68□□□□□ -2.14
PABPC1-212ENST00000519622 KRTAP19-5Q3LI72 72 aa1.67□□□□□ -2.14
PABPC1-212ENST00000519622 KRTAP19-7Q3SYF9 63 aa1.67□□□□□ -2.14
PABPC1-212ENST00000519622 KMT2DO14686 5537 aa1.66□□□□□ -2.14
PABPC1-212ENST00000519622 KRTAP19-6Q3LI70 58 aa1.63□□□□□ -2.15
PABPC1-212ENST00000519622 PRO2289Q9P1D8 64 aa1.63□□□□□ -2.15
PABPC1-212ENST00000519622 MUC19Q7Z5P9 8384 aa1.63□□□□□ -2.15
PABPC1-212ENST00000519622 KRTAP5-7Q6L8G8 165 aa1.62□□□□□ -2.15
PABPC1-212ENST00000519622 MT1EP04732 61 aa1.61□□□□□ -2.15
PABPC1-212ENST00000519622 FCGBPQ9Y6R7 5405 aaPredicted RBP1.59□□□□□ -2.15
PABPC1-212ENST00000519622 MT1LQ93083 61 aa1.59□□□□□ -2.15
PABPC1-212ENST00000519622 LUZP6Q538Z0 58 aa1.57□□□□□ -2.16
PABPC1-212ENST00000519622 KRTAP2-3P0C7H8 128 aa1.52□□□□□ -2.17
PABPC1-212ENST00000519622 KRTAP2-4Q9BYR9 128 aa1.52□□□□□ -2.17
PABPC1-212ENST00000519622 KRTAP2-1Q9BYU5 128 aa1.52□□□□□ -2.17
PABPC1-212ENST00000519622 MUC12Q9UKN1 5478 aa1.5□□□□□ -2.17
PABPC1-212ENST00000519622 MT1MQ8N339 61 aa1.5□□□□□ -2.17
PABPC1-212ENST00000519622 KRTAP19-3Q7Z4W3 81 aa1.48□□□□□ -2.17
PABPC1-212ENST00000519622 FSIP2Q5CZC0 6907 aa1.45□□□□□ -2.18
PABPC1-212ENST00000519622 MT1GP13640 62 aa1.44□□□□□ -2.18
PABPC1-212ENST00000519622 MDN1Q9NU22 5596 aa1.41□□□□□ -2.18
PABPC1-212ENST00000519622 INE1O15225 51 aa1.41□□□□□ -2.18
PABPC1-212ENST00000519622 KRTAP21-2Q3LI59 83 aa1.41□□□□□ -2.18
PABPC1-212ENST00000519622 SPRR2FQ96RM1 72 aa1.39□□□□□ -2.19
PABPC1-212ENST00000519622 MACF1Q9UPN3 7388 aaKnown RBP1.39□□□□□ -2.19
PABPC1-212ENST00000519622 KRTAP6-3Q3LI67 103 aa1.38□□□□□ -2.19
PABPC1-212ENST00000519622 CRCT1Q9UGL9 99 aa1.36□□□□□ -2.19
PABPC1-212ENST00000519622 KRTAP12-4P60329 112 aa1.35□□□□□ -2.19
PABPC1-212ENST00000519622 KRTAP6-1Q3LI64 71 aa1.35□□□□□ -2.19
PABPC1-212ENST00000519622 SYNE2Q8WXH0 6885 aaKnown RBP1.34□□□□□ -2.2
PABPC1-212ENST00000519622 MT1AP04731 61 aa1.33□□□□□ -2.2
PABPC1-212ENST00000519622 SPRR2EP22531 72 aa1.29□□□□□ -2.2
PABPC1-212ENST00000519622 SPRR2BP35325 72 aa1.29□□□□□ -2.2
PABPC1-212ENST00000519622 SPRR2AP35326 72 aa1.29□□□□□ -2.2
PABPC1-212ENST00000519622 DSTQ03001 7570 aaKnown RBP1.28□□□□□ -2.2
PABPC1-212ENST00000519622 SYNE1Q8NF91 8797 aaKnown RBP1.26□□□□□ -2.21
PABPC1-212ENST00000519622 NEBP20929 6669 aa1.25□□□□□ -2.21
PABPC1-212ENST00000519622 SPRR2DP22532 72 aa1.23□□□□□ -2.21
PABPC1-212ENST00000519622 KRTAP6-2Q3LI66 62 aa1.19□□□□□ -2.22
PABPC1-212ENST00000519622 KRTAP20-2Q3LI61 65 aa1.13□□□□□ -2.23
PABPC1-212ENST00000519622 PRM1P04553 51 aa1.11□□□□□ -2.23
PABPC1-212ENST00000519622 MT4P47944 62 aa1.07□□□□□ -2.24
PABPC1-212ENST00000519622 MUC5ACP98088 5654 aa1.06□□□□□ -2.24
PABPC1-212ENST00000519622 KRTAP20-1Q3LI63 56 aa1.06□□□□□ -2.24
PABPC1-212ENST00000519622 KRTAP5-10Q6L8G5 202 aa1.01□□□□□ -2.25
PABPC1-212ENST00000519622 AHNAK2Q8IVF2 5795 aa1□□□□□ -2.25
PABPC1-212ENST00000519622 MUC5BQ9HC84 5762 aaPredicted RBP0.87□□□□□ -2.27
PABPC1-212ENST00000519622 GPR98Q8WXG9 6306 aa0.82□□□□□ -2.28
PABPC1-212ENST00000519622 AHNAKQ09666 5890 aaKnown RBP0.76□□□□□ -2.29
PABPC1-212ENST00000519622 KRTAP21-1Q3LI58 79 aa0.74□□□□□ -2.29
PABPC1-212ENST00000519622 PHGR1C9JFL3 82 aa0.71□□□□□ -2.3
PABPC1-212ENST00000519622 MUC16Q8WXI7 14507 aa0.67□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 105.8 ms