RNA–Protein interactions for RNA: ENST00000519100.5

PABPC1-209, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-209ENST00000519100 C6orf48Q9UBA6 75 aa0.91□□□□□ -2.26
PABPC1-209ENST00000519100 IGKV3-7A0A075B6H7 116 aa0.9□□□□□ -2.27
PABPC1-209ENST00000519100 SPINK7P58062 85 aa0.9□□□□□ -2.27
PABPC1-209ENST00000519100 PRB3Q04118 309 aaPredicted RBP0.9□□□□□ -2.27
PABPC1-209ENST00000519100 COX6B2Q6YFQ2 88 aa0.9□□□□□ -2.27
PABPC1-209ENST00000519100 Q6ZRX8 168 aa0.9□□□□□ -2.27
PABPC1-209ENST00000519100 SPRR1AP35321 89 aa0.89□□□□□ -2.27
PABPC1-209ENST00000519100 SPRR2FQ96RM1 72 aa0.89□□□□□ -2.27
PABPC1-209ENST00000519100 PRO0255Q9UI72 69 aa0.89□□□□□ -2.27
PABPC1-209ENST00000519100 NBDYA0A0U1RRE5 68 aa0.88□□□□□ -2.27
PABPC1-209ENST00000519100 H3BNG1 76 aa0.88□□□□□ -2.27
PABPC1-209ENST00000519100 SPRR1BP22528 89 aa0.88□□□□□ -2.27
PABPC1-209ENST00000519100 WFDC10BQ8IUB3 73 aa0.88□□□□□ -2.27
PABPC1-209ENST00000519100 IGKV3OR2-268A0A0C4DH90 116 aa0.87□□□□□ -2.27
PABPC1-209ENST00000519100 MMP24-AS1A0A0U1RRL7 71 aa0.87□□□□□ -2.27
PABPC1-209ENST00000519100 G3V318 75 aa0.87□□□□□ -2.27
PABPC1-209ENST00000519100 M0R2T5 61 aa0.87□□□□□ -2.27
PABPC1-209ENST00000519100 HTN1P15515 57 aa0.87□□□□□ -2.27
PABPC1-209ENST00000519100 WFDC13Q8IUB5 93 aa0.87□□□□□ -2.27
PABPC1-209ENST00000519100 MRPL34Q9BQ48 92 aaKnown RBP0.87□□□□□ -2.27
PABPC1-209ENST00000519100 MT1FP04733 61 aa0.86□□□□□ -2.27
PABPC1-209ENST00000519100 LINC00472Q9H8W2 130 aa0.86□□□□□ -2.27
PABPC1-209ENST00000519100 MT2AP02795 61 aa0.85□□□□□ -2.27
PABPC1-209ENST00000519100 CLPSL2Q6UWE3 100 aa0.85□□□□□ -2.27
PABPC1-209ENST00000519100 UNQ6190/PRO20217Q6UXQ8 127 aa0.85□□□□□ -2.27
PABPC1-209ENST00000519100 DEFB105AQ8NG35 78 aa0.85□□□□□ -2.27
PABPC1-209ENST00000519100 NOP10Q9NPE3 64 aaKnown RBP0.85□□□□□ -2.27
PABPC1-209ENST00000519100 INE1O15225 51 aa0.84□□□□□ -2.27
PABPC1-209ENST00000519100 DEFB4AO15263 64 aa0.84□□□□□ -2.27
PABPC1-209ENST00000519100 SPART-AS1P0CW21 52 aa0.84□□□□□ -2.27
PABPC1-209ENST00000519100 UBE2DNLQ8IWF7 75 aa0.84□□□□□ -2.27
PABPC1-209ENST00000519100 CRIPTQ9P021 101 aa0.84□□□□□ -2.27
PABPC1-209ENST00000519100 A0A087WTM6 91 aa0.83□□□□□ -2.28
PABPC1-209ENST00000519100 DEFB1P60022 68 aa0.83□□□□□ -2.28
PABPC1-209ENST00000519100 LINC01556Q5JQF7 62 aa0.83□□□□□ -2.28
PABPC1-209ENST00000519100 SSBP3-AS1Q7Z2R9 100 aa0.83□□□□□ -2.28
PABPC1-209ENST00000519100 DEFB130BP0DP73 79 aa0.82□□□□□ -2.28
PABPC1-209ENST00000519100 DEFB130AP0DP74 79 aa0.82□□□□□ -2.28
PABPC1-209ENST00000519100 RPL37P61927 97 aaKnown RBP0.82□□□□□ -2.28
PABPC1-209ENST00000519100 DEFB135Q30KP9 77 aa0.82□□□□□ -2.28
PABPC1-209ENST00000519100 H1FX-AS1Q4G0G2 97 aa0.82□□□□□ -2.28
PABPC1-209ENST00000519100 Q96NJ1 140 aa0.82□□□□□ -2.28
PABPC1-209ENST00000519100 A0A096LPF7 62 aa0.8□□□□□ -2.28
PABPC1-209ENST00000519100 H0YAA0 97 aa0.8□□□□□ -2.28
PABPC1-209ENST00000519100 RPS29P62273 56 aaKnown RBP0.79□□□□□ -2.28
PABPC1-209ENST00000519100 PRLHP81277 87 aa0.79□□□□□ -2.28
PABPC1-209ENST00000519100 PLAC4Q8WY50 150 aa0.79□□□□□ -2.28
PABPC1-209ENST00000519100 MUC16Q8WXI7 14507 aa0.79□□□□□ -2.28
PABPC1-209ENST00000519100 SYNE1Q8NF91 8797 aaKnown RBP0.79□□□□□ -2.28
PABPC1-209ENST00000519100 A0A096LNI7 61 aa0.76□□□□□ -2.29
PABPC1-209ENST00000519100 M0QZ58 72 aa0.76□□□□□ -2.29
PABPC1-209ENST00000519100 SPINK1P00995 79 aa0.75□□□□□ -2.29
PABPC1-209ENST00000519100 HTN3P15516 51 aa0.75□□□□□ -2.29
PABPC1-209ENST00000519100 SPINK6Q6UWN8 80 aa0.75□□□□□ -2.29
PABPC1-209ENST00000519100 KRTAP20-2Q3LI61 65 aa0.74□□□□□ -2.29
PABPC1-209ENST00000519100 S4R3F8 94 aa0.73□□□□□ -2.29
PABPC1-209ENST00000519100 PHGR1C9JFL3 82 aa0.72□□□□□ -2.29
PABPC1-209ENST00000519100 C9orf92A6NGG3 77 aa0.7□□□□□ -2.3
PABPC1-209ENST00000519100 C10orf95Q9H7T3 257 aa0.7□□□□□ -2.3
PABPC1-209ENST00000519100 A0A0D9SG42 100 aa0.69□□□□□ -2.3
PABPC1-209ENST00000519100 TNP1P09430 55 aa0.68□□□□□ -2.3
PABPC1-209ENST00000519100 KRTAP8-1Q8IUC2 63 aa0.68□□□□□ -2.3
PABPC1-209ENST00000519100 MT1BP07438 61 aa0.64□□□□□ -2.31
PABPC1-209ENST00000519100 KRTAP21-1Q3LI58 79 aa0.52□□□□□ -2.33
PABPC1-209ENST00000519100 SPRR2GQ9BYE4 73 aa0.52□□□□□ -2.33
PABPC1-209ENST00000519100 KRTAP19-8Q3LI54 63 aa0.5□□□□□ -2.33
PABPC1-209ENST00000519100 KRTAP19-3Q7Z4W3 81 aa0.5□□□□□ -2.33
PABPC1-209ENST00000519100 MT1AP04731 61 aa0.46□□□□□ -2.34
PABPC1-209ENST00000519100 MT1EP04732 61 aa0.46□□□□□ -2.34
PABPC1-209ENST00000519100 KRTAP19-5Q3LI72 72 aa0.46□□□□□ -2.34
PABPC1-209ENST00000519100 MT1XP80297 61 aa0.45□□□□□ -2.34
PABPC1-209ENST00000519100 MT1LQ93083 61 aa0.45□□□□□ -2.34
PABPC1-209ENST00000519100 MT1MQ8N339 61 aa0.44□□□□□ -2.34
PABPC1-209ENST00000519100 KRTAP19-7Q3SYF9 63 aa0.43□□□□□ -2.34
PABPC1-209ENST00000519100 PRM1P04553 51 aa0.41□□□□□ -2.34
PABPC1-209ENST00000519100 MT1GP13640 62 aa0.39□□□□□ -2.35
PABPC1-209ENST00000519100 KRTAP6-2Q3LI66 62 aa0.39□□□□□ -2.35
PABPC1-209ENST00000519100 KRTAP6-1Q3LI64 71 aa0.32□□□□□ -2.36
Retrieved 78 of 20,778 RNA–protein pairs in 11.3 ms