RNA–Protein interactions for RNA: ENST00000517766.5

CD47-205, Transcript of CD47 molecule, humanhuman

TSL 2

Gene CD47, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-205ENST00000517766 CAMK2N1Q7Z7J9 78 aa2.61□□□□□ -1.99
CD47-205ENST00000517766 KRTAP25-1Q3LHN0 102 aa2.59□□□□□ -1.99
CD47-205ENST00000517766 KRTAP5-5Q701N2 237 aaPredicted RBP2.58□□□□□ -2
CD47-205ENST00000517766 SPRR2GQ9BYE4 73 aa2.58□□□□□ -2
CD47-205ENST00000517766 KRTAP10-10P60014 251 aa2.57□□□□□ -2
CD47-205ENST00000517766 MT2AP02795 61 aa2.56□□□□□ -2
CD47-205ENST00000517766 MUC2Q02817 5179 aa2.55□□□□□ -2
CD47-205ENST00000517766 MT1FP04733 61 aa2.55□□□□□ -2
CD47-205ENST00000517766 PLAC4Q8WY50 150 aa2.55□□□□□ -2
CD47-205ENST00000517766 C10orf95Q9H7T3 257 aa2.53□□□□□ -2
CD47-205ENST00000517766 RNF213Q63HN8 5207 aa2.52□□□□□ -2.01
CD47-205ENST00000517766 KRTAP19-8Q3LI54 63 aa2.51□□□□□ -2.01
CD47-205ENST00000517766 FAT4Q6V0I7 4981 aa2.51□□□□□ -2.01
CD47-205ENST00000517766 TNP1P09430 55 aa2.48□□□□□ -2.01
CD47-205ENST00000517766 UBR4Q5T4S7 5183 aa2.47□□□□□ -2.01
CD47-205ENST00000517766 LCE1CQ5T751 118 aa2.47□□□□□ -2.01
CD47-205ENST00000517766 LCE1BQ5T7P3 118 aa2.47□□□□□ -2.01
CD47-205ENST00000517766 PP632Q6XCG6 107 aa2.47□□□□□ -2.01
CD47-205ENST00000517766 MT1BP07438 61 aa2.43□□□□□ -2.02
CD47-205ENST00000517766 PRO2289Q9P1D8 64 aa2.4□□□□□ -2.03
CD47-205ENST00000517766 MT1XP80297 61 aa2.37□□□□□ -2.03
CD47-205ENST00000517766 HMCN1Q96RW7 5635 aa2.36□□□□□ -2.03
CD47-205ENST00000517766 KRTAP8-1Q8IUC2 63 aa2.29□□□□□ -2.04
CD47-205ENST00000517766 LUZP6Q538Z0 58 aa2.28□□□□□ -2.04
CD47-205ENST00000517766 LCE3DQ9BYE3 92 aa2.27□□□□□ -2.05
CD47-205ENST00000517766 MUC19Q7Z5P9 8384 aa2.25□□□□□ -2.05
CD47-205ENST00000517766 KRTAP19-6Q3LI70 58 aa2.24□□□□□ -2.05
CD47-205ENST00000517766 KRTAP12-3P60328 96 aa2.23□□□□□ -2.05
CD47-205ENST00000517766 SPRR5A0A1B0GTR4 108 aa2.19□□□□□ -2.06
CD47-205ENST00000517766 KRTAP19-5Q3LI72 72 aa2.17□□□□□ -2.06
CD47-205ENST00000517766 USH2AO75445 5202 aa2.15□□□□□ -2.07
CD47-205ENST00000517766 SSPOA2VEC9 5147 aa2.13□□□□□ -2.07
CD47-205ENST00000517766 KRTAP19-7Q3SYF9 63 aa2.12□□□□□ -2.07
CD47-205ENST00000517766 MT1EP04732 61 aa2.08□□□□□ -2.08
CD47-205ENST00000517766 MT1LQ93083 61 aa2.05□□□□□ -2.08
CD47-205ENST00000517766 CRCT1Q9UGL9 99 aa2.03□□□□□ -2.08
CD47-205ENST00000517766 MT1GP13640 62 aa2.01□□□□□ -2.09
CD47-205ENST00000517766 KRTAP5-7Q6L8G8 165 aa2.01□□□□□ -2.09
CD47-205ENST00000517766 KRTAP19-3Q7Z4W3 81 aa2□□□□□ -2.09
CD47-205ENST00000517766 SPRR2FQ96RM1 72 aa1.99□□□□□ -2.09
CD47-205ENST00000517766 KMT2DO14686 5537 aa1.99□□□□□ -2.09
CD47-205ENST00000517766 FSIP2Q5CZC0 6907 aa1.97□□□□□ -2.09
CD47-205ENST00000517766 MT1MQ8N339 61 aa1.96□□□□□ -2.1
CD47-205ENST00000517766 FCGBPQ9Y6R7 5405 aaPredicted RBP1.95□□□□□ -2.1
CD47-205ENST00000517766 KRTAP6-3Q3LI67 103 aa1.89□□□□□ -2.11
CD47-205ENST00000517766 KRTAP21-2Q3LI59 83 aa1.88□□□□□ -2.11
CD47-205ENST00000517766 MACF1Q9UPN3 7388 aaKnown RBP1.88□□□□□ -2.11
CD47-205ENST00000517766 SPRR2EP22531 72 aa1.87□□□□□ -2.11
CD47-205ENST00000517766 SPRR2BP35325 72 aa1.87□□□□□ -2.11
CD47-205ENST00000517766 SPRR2AP35326 72 aa1.87□□□□□ -2.11
CD47-205ENST00000517766 KRTAP2-3P0C7H8 128 aa1.86□□□□□ -2.11
CD47-205ENST00000517766 KRTAP2-4Q9BYR9 128 aa1.86□□□□□ -2.11
CD47-205ENST00000517766 KRTAP2-1Q9BYU5 128 aa1.86□□□□□ -2.11
CD47-205ENST00000517766 INE1O15225 51 aa1.84□□□□□ -2.11
CD47-205ENST00000517766 MUC12Q9UKN1 5478 aa1.8□□□□□ -2.12
CD47-205ENST00000517766 SPRR2DP22532 72 aa1.8□□□□□ -2.12
CD47-205ENST00000517766 MT1AP04731 61 aa1.76□□□□□ -2.13
CD47-205ENST00000517766 SYNE2Q8WXH0 6885 aaKnown RBP1.76□□□□□ -2.13
CD47-205ENST00000517766 KRTAP6-1Q3LI64 71 aa1.72□□□□□ -2.13
CD47-205ENST00000517766 DSTQ03001 7570 aaKnown RBP1.68□□□□□ -2.14
CD47-205ENST00000517766 KRTAP12-4P60329 112 aa1.64□□□□□ -2.15
CD47-205ENST00000517766 MDN1Q9NU22 5596 aa1.63□□□□□ -2.15
CD47-205ENST00000517766 SYNE1Q8NF91 8797 aaKnown RBP1.61□□□□□ -2.15
CD47-205ENST00000517766 NEBP20929 6669 aa1.6□□□□□ -2.15
CD47-205ENST00000517766 KRTAP20-1Q3LI63 56 aa1.57□□□□□ -2.16
CD47-205ENST00000517766 KRTAP6-2Q3LI66 62 aa1.57□□□□□ -2.16
CD47-205ENST00000517766 MT4P47944 62 aa1.54□□□□□ -2.16
CD47-205ENST00000517766 KRTAP20-2Q3LI61 65 aa1.53□□□□□ -2.16
CD47-205ENST00000517766 PRM1P04553 51 aa1.38□□□□□ -2.19
CD47-205ENST00000517766 GPR98Q8WXG9 6306 aa1.31□□□□□ -2.2
CD47-205ENST00000517766 KRTAP5-10Q6L8G5 202 aa1.28□□□□□ -2.2
CD47-205ENST00000517766 AHNAK2Q8IVF2 5795 aa1.19□□□□□ -2.22
CD47-205ENST00000517766 MUC5ACP98088 5654 aa1.17□□□□□ -2.22
CD47-205ENST00000517766 AHNAKQ09666 5890 aaKnown RBP1.02□□□□□ -2.25
CD47-205ENST00000517766 MUC5BQ9HC84 5762 aaPredicted RBP0.98□□□□□ -2.25
CD47-205ENST00000517766 PHGR1C9JFL3 82 aa0.95□□□□□ -2.26
CD47-205ENST00000517766 KRTAP21-1Q3LI58 79 aa0.87□□□□□ -2.27
CD47-205ENST00000517766 MUC16Q8WXI7 14507 aa0.74□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 106.6 ms