RNA–Protein interactions for RNA: ENST00000517570.5

MTCL1-205, Transcript of microtubule crosslinking factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MTCL1, Length 6,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-205ENST00000517570 LCE1BQ5T7P3 118 aa4.93□□□□□ -1.62
MTCL1-205ENST00000517570 KMT2CQ8NEZ4 4911 aaKnown RBP4.91□□□□□ -1.62
MTCL1-205ENST00000517570 LCE1DQ5T752 114 aa4.89□□□□□ -1.63
MTCL1-205ENST00000517570 KRTAP4-9Q9BYQ8 210 aa4.88□□□□□ -1.63
MTCL1-205ENST00000517570 KRTAP19-6Q3LI70 58 aa4.87□□□□□ -1.63
MTCL1-205ENST00000517570 KRTAP2-3P0C7H8 128 aa4.8□□□□□ -1.64
MTCL1-205ENST00000517570 KRTAP2-4Q9BYR9 128 aa4.8□□□□□ -1.64
MTCL1-205ENST00000517570 KRTAP2-1Q9BYU5 128 aa4.8□□□□□ -1.64
MTCL1-205ENST00000517570 MT1AP04731 61 aa4.74□□□□□ -1.65
MTCL1-205ENST00000517570 KRTAP19-7Q3SYF9 63 aa4.74□□□□□ -1.65
MTCL1-205ENST00000517570 ABCA13Q86UQ4 5058 aa4.65□□□□□ -1.67
MTCL1-205ENST00000517570 KRTAP6-2Q3LI66 62 aa4.59□□□□□ -1.67
MTCL1-205ENST00000517570 LCE5AQ5TCM9 118 aa4.58□□□□□ -1.68
MTCL1-205ENST00000517570 LCE2AQ5TA79 106 aaPredicted RBP4.57□□□□□ -1.68
MTCL1-205ENST00000517570 EPPK1P58107 5090 aaKnown RBP4.56□□□□□ -1.68
MTCL1-205ENST00000517570 KRTAP9-2Q9BYQ4 174 aa4.54□□□□□ -1.68
MTCL1-205ENST00000517570 KRTAP6-1Q3LI64 71 aa4.52□□□□□ -1.69
MTCL1-205ENST00000517570 KRTAP9-6A8MVA2 160 aa4.51□□□□□ -1.69
MTCL1-205ENST00000517570 RNF213Q63HN8 5207 aa4.5□□□□□ -1.69
MTCL1-205ENST00000517570 HMCN2Q8NDA2 5059 aa4.49□□□□□ -1.69
MTCL1-205ENST00000517570 FAT4Q6V0I7 4981 aa4.48□□□□□ -1.69
MTCL1-205ENST00000517570 KRTAP9-7A8MTY7 169 aa4.45□□□□□ -1.7
MTCL1-205ENST00000517570 KRTAP9-4Q9BYQ2 154 aa4.43□□□□□ -1.7
MTCL1-205ENST00000517570 SYNE2Q8WXH0 6885 aaKnown RBP4.34□□□□□ -1.72
MTCL1-205ENST00000517570 LCE1AQ5T7P2 110 aa4.34□□□□□ -1.72
MTCL1-205ENST00000517570 UBR4Q5T4S7 5183 aa4.31□□□□□ -1.72
MTCL1-205ENST00000517570 KRTAP20-1Q3LI63 56 aa4.25□□□□□ -1.73
MTCL1-205ENST00000517570 KRTAP9-6A0A140TA67 174 aa4.2□□□□□ -1.74
MTCL1-205ENST00000517570 LCE1CQ5T751 118 aa4.2□□□□□ -1.74
MTCL1-205ENST00000517570 LCE1EQ5T753 118 aa4.2□□□□□ -1.74
MTCL1-205ENST00000517570 LCE1FQ5T754 118 aa4.2□□□□□ -1.74
MTCL1-205ENST00000517570 SYNE1Q8NF91 8797 aaKnown RBP4.18□□□□□ -1.74
MTCL1-205ENST00000517570 KRTAP6-3Q3LI67 103 aa4.15□□□□□ -1.75
MTCL1-205ENST00000517570 LCE4AQ5TA78 99 aa4.13□□□□□ -1.75
MTCL1-205ENST00000517570 KRTAP2-2Q9BYT5 123 aa4.05□□□□□ -1.76
MTCL1-205ENST00000517570 MUC2Q02817 5179 aa4.04□□□□□ -1.76
MTCL1-205ENST00000517570 FSIP2Q5CZC0 6907 aa3.95□□□□□ -1.78
MTCL1-205ENST00000517570 OBSCNQ5VST9 7968 aa3.94□□□□□ -1.78
MTCL1-205ENST00000517570 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.9□□□□□ -1.78
MTCL1-205ENST00000517570 KRTAP4-11Q9BYQ6 195 aa3.89□□□□□ -1.79
MTCL1-205ENST00000517570 USH2AO75445 5202 aa3.71□□□□□ -1.82
MTCL1-205ENST00000517570 KRTAP9-9Q9BYP9 154 aa3.66□□□□□ -1.82
MTCL1-205ENST00000517570 KRTAP5-9P26371 169 aa3.63□□□□□ -1.83
MTCL1-205ENST00000517570 KMT2DO14686 5537 aa3.58□□□□□ -1.84
MTCL1-205ENST00000517570 FCGBPQ9Y6R7 5405 aaPredicted RBP3.57□□□□□ -1.84
MTCL1-205ENST00000517570 KRTAP4-6Q9BYQ5 205 aa3.56□□□□□ -1.84
MTCL1-205ENST00000517570 KRTAP4-4Q9BYR3 166 aa3.51□□□□□ -1.85
MTCL1-205ENST00000517570 KRTAP20-2Q3LI61 65 aa3.5□□□□□ -1.85
MTCL1-205ENST00000517570 SSPOA2VEC9 5147 aa3.47□□□□□ -1.85
MTCL1-205ENST00000517570 KRTAP5-5Q701N2 237 aaPredicted RBP3.46□□□□□ -1.86
MTCL1-205ENST00000517570 KRTAP4-12Q9BQ66 201 aa3.35□□□□□ -1.87
MTCL1-205ENST00000517570 KRTAP4-2Q9BYR5 136 aa3.35□□□□□ -1.87
MTCL1-205ENST00000517570 NEBP20929 6669 aa3.34□□□□□ -1.88
MTCL1-205ENST00000517570 DSTQ03001 7570 aaKnown RBP3.31□□□□□ -1.88
MTCL1-205ENST00000517570 MACF1Q9UPN3 7388 aaKnown RBP3.31□□□□□ -1.88
MTCL1-205ENST00000517570 KRTAP5-4Q6L8H1 288 aa3.23□□□□□ -1.89
MTCL1-205ENST00000517570 MUC12Q9UKN1 5478 aa3.18□□□□□ -1.9
MTCL1-205ENST00000517570 MDN1Q9NU22 5596 aa3.05□□□□□ -1.92
MTCL1-205ENST00000517570 MUC19Q7Z5P9 8384 aa3.02□□□□□ -1.93
MTCL1-205ENST00000517570 KRTAP5-3Q6L8H2 238 aa2.8□□□□□ -1.96
MTCL1-205ENST00000517570 GPR98Q8WXG9 6306 aa2.77□□□□□ -1.97
MTCL1-205ENST00000517570 KRTAP5-10Q6L8G5 202 aa2.66□□□□□ -1.98
MTCL1-205ENST00000517570 MUC5ACP98088 5654 aa2.61□□□□□ -1.99
MTCL1-205ENST00000517570 KRTAP5-2Q701N4 177 aa2.6□□□□□ -1.99
MTCL1-205ENST00000517570 AHNAK2Q8IVF2 5795 aa2.48□□□□□ -2.01
MTCL1-205ENST00000517570 KRTAP5-8O75690 187 aa2.48□□□□□ -2.01
MTCL1-205ENST00000517570 HMCN1Q96RW7 5635 aa2.46□□□□□ -2.02
MTCL1-205ENST00000517570 PHGR1C9JFL3 82 aa2.36□□□□□ -2.03
MTCL1-205ENST00000517570 KRTAP5-1Q6L8H4 278 aa2.35□□□□□ -2.03
MTCL1-205ENST00000517570 KRTAP5-11Q6L8G4 156 aa2.34□□□□□ -2.04
MTCL1-205ENST00000517570 MUC5BQ9HC84 5762 aaPredicted RBP2.33□□□□□ -2.04
MTCL1-205ENST00000517570 KRTAP21-2Q3LI59 83 aa2.23□□□□□ -2.05
MTCL1-205ENST00000517570 KRTAP21-1Q3LI58 79 aa2.19□□□□□ -2.06
MTCL1-205ENST00000517570 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.15□□□□□ -2.07
MTCL1-205ENST00000517570 AHNAKQ09666 5890 aaKnown RBP2.04□□□□□ -2.08
MTCL1-205ENST00000517570 KRTAP5-7Q6L8G8 165 aa1.82□□□□□ -2.12
MTCL1-205ENST00000517570 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 122.6 ms