RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 KRTAP9-9Q9BYP9 154 aa4.58□□□□□ -1.68
SNHG4-208ENST00000514110 KRTAP9-4Q9BYQ2 154 aa4.58□□□□□ -1.68
SNHG4-208ENST00000514110 MT1EP04732 61 aa4.57□□□□□ -1.68
SNHG4-208ENST00000514110 SNURFQ9Y675 71 aa4.57□□□□□ -1.68
SNHG4-208ENST00000514110 KRTAP4-9Q9BYQ8 210 aa4.56□□□□□ -1.68
SNHG4-208ENST00000514110 KRTAP19-3Q7Z4W3 81 aa4.55□□□□□ -1.68
SNHG4-208ENST00000514110 A0A1B0GU33 70 aa4.54□□□□□ -1.68
SNHG4-208ENST00000514110 DSTQ03001 7570 aaKnown RBP4.45□□□□□ -1.7
SNHG4-208ENST00000514110 A0A0D9SG42 100 aa4.45□□□□□ -1.7
SNHG4-208ENST00000514110 KRTAP19-5Q3LI72 72 aa4.44□□□□□ -1.7
SNHG4-208ENST00000514110 MT1GP13640 62 aa4.42□□□□□ -1.7
SNHG4-208ENST00000514110 LCE1DQ5T752 114 aa4.42□□□□□ -1.7
SNHG4-208ENST00000514110 KRTAP25-1Q3LHN0 102 aa4.41□□□□□ -1.7
SNHG4-208ENST00000514110 SPATA8Q6RVD6 105 aa4.41□□□□□ -1.7
SNHG4-208ENST00000514110 COA5Q86WW8 74 aa4.41□□□□□ -1.7
SNHG4-208ENST00000514110 GPR98Q8WXG9 6306 aa4.4□□□□□ -1.71
SNHG4-208ENST00000514110 SPINT4Q6UDR6 99 aa4.39□□□□□ -1.71
SNHG4-208ENST00000514110 KRTAP4-7Q9BYR0 210 aa4.39□□□□□ -1.71
SNHG4-208ENST00000514110 A8MU10 97 aa4.37□□□□□ -1.71
SNHG4-208ENST00000514110 KRTAP12-1P59990 96 aa4.36□□□□□ -1.71
SNHG4-208ENST00000514110 PP632Q6XCG6 107 aa4.36□□□□□ -1.71
SNHG4-208ENST00000514110 MT1MQ8N339 61 aa4.36□□□□□ -1.71
SNHG4-208ENST00000514110 MT4P47944 62 aa4.35□□□□□ -1.71
SNHG4-208ENST00000514110 LCE4AQ5TA78 99 aa4.35□□□□□ -1.71
SNHG4-208ENST00000514110 KRTAP19-4Q3LI73 84 aa4.34□□□□□ -1.71
SNHG4-208ENST00000514110 MT1LQ93083 61 aa4.33□□□□□ -1.72
SNHG4-208ENST00000514110 HMCN1Q96RW7 5635 aa4.3□□□□□ -1.72
SNHG4-208ENST00000514110 KRTAP15-1Q3LI76 137 aa4.3□□□□□ -1.72
SNHG4-208ENST00000514110 PRR15LQ9BU68 103 aa4.28□□□□□ -1.72
SNHG4-208ENST00000514110 KRTAP4-3Q9BYR4 195 aa4.28□□□□□ -1.72
SNHG4-208ENST00000514110 LCE3AQ5TA76 89 aa4.25□□□□□ -1.73
SNHG4-208ENST00000514110 KRTAP5-4Q6L8H1 288 aa4.25□□□□□ -1.73
SNHG4-208ENST00000514110 C10orf95Q9H7T3 257 aa4.25□□□□□ -1.73
SNHG4-208ENST00000514110 KRTAP5-10Q6L8G5 202 aa4.2□□□□□ -1.74
SNHG4-208ENST00000514110 KRTAP4-2Q9BYR5 136 aa4.2□□□□□ -1.74
SNHG4-208ENST00000514110 AHNAK2Q8IVF2 5795 aa4.19□□□□□ -1.74
SNHG4-208ENST00000514110 LINC01558Q9Y6Z2 57 aa4.19□□□□□ -1.74
SNHG4-208ENST00000514110 A0A1B0GU69 56 aa4.17□□□□□ -1.74
SNHG4-208ENST00000514110 TNP1P09430 55 aa4.17□□□□□ -1.74
SNHG4-208ENST00000514110 UQCR11O14957 56 aa4.15□□□□□ -1.75
SNHG4-208ENST00000514110 KRTAP4-11Q9BYQ6 195 aa4.09□□□□□ -1.75
SNHG4-208ENST00000514110 KRTAP12-3P60328 96 aa4.07□□□□□ -1.76
SNHG4-208ENST00000514110 KRTAP5-7Q6L8G8 165 aa4.05□□□□□ -1.76
SNHG4-208ENST00000514110 KRTAP5-3Q6L8H2 238 aa4.05□□□□□ -1.76
SNHG4-208ENST00000514110 KRTAP20-2Q3LI61 65 aa4.03□□□□□ -1.76
SNHG4-208ENST00000514110 KRTAP5-5Q701N2 237 aaPredicted RBP4.02□□□□□ -1.77
SNHG4-208ENST00000514110 SPRR5A0A1B0GTR4 108 aa3.98□□□□□ -1.77
SNHG4-208ENST00000514110 INE1O15225 51 aa3.93□□□□□ -1.78
SNHG4-208ENST00000514110 KRTAP12-4P60329 112 aa3.93□□□□□ -1.78
SNHG4-208ENST00000514110 SYNE1Q8NF91 8797 aaKnown RBP3.86□□□□□ -1.79
SNHG4-208ENST00000514110 LCE3CQ5T5A8 94 aa3.73□□□□□ -1.81
SNHG4-208ENST00000514110 KRTAP5-2Q701N4 177 aa3.7□□□□□ -1.82
SNHG4-208ENST00000514110 KRTAP6-1Q3LI64 71 aa3.69□□□□□ -1.82
SNHG4-208ENST00000514110 MT1AP04731 61 aa3.68□□□□□ -1.82
SNHG4-208ENST00000514110 KRTAP5-8O75690 187 aa3.61□□□□□ -1.83
SNHG4-208ENST00000514110 MT3P25713 68 aa3.61□□□□□ -1.83
SNHG4-208ENST00000514110 KRTAP9-6A8MVA2 160 aa3.56□□□□□ -1.84
SNHG4-208ENST00000514110 KRTAP6-2Q3LI66 62 aa3.55□□□□□ -1.84
SNHG4-208ENST00000514110 MUC5ACP98088 5654 aa3.48□□□□□ -1.85
SNHG4-208ENST00000514110 MUC5BQ9HC84 5762 aaPredicted RBP3.45□□□□□ -1.86
SNHG4-208ENST00000514110 AHNAKQ09666 5890 aaKnown RBP3.43□□□□□ -1.86
SNHG4-208ENST00000514110 OBSCNQ5VST9 7968 aa3.36□□□□□ -1.87
SNHG4-208ENST00000514110 KRTAP5-1Q6L8H4 278 aa3.35□□□□□ -1.87
SNHG4-208ENST00000514110 LCE1FQ5T754 118 aa3.32□□□□□ -1.88
SNHG4-208ENST00000514110 LCE1EQ5T753 118 aa3.12□□□□□ -1.91
SNHG4-208ENST00000514110 LCE1BQ5T7P3 118 aa2.98□□□□□ -1.93
SNHG4-208ENST00000514110 LCE1CQ5T751 118 aa2.91□□□□□ -1.94
SNHG4-208ENST00000514110 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.85□□□□□ -1.95
SNHG4-208ENST00000514110 LCE3EQ5T5B0 92 aa2.76□□□□□ -1.97
SNHG4-208ENST00000514110 KRTAP5-11Q6L8G4 156 aa2.75□□□□□ -1.97
SNHG4-208ENST00000514110 LCE3DQ9BYE3 92 aa2.65□□□□□ -1.99
SNHG4-208ENST00000514110 PHGR1C9JFL3 82 aa2.44□□□□□ -2.02
SNHG4-208ENST00000514110 KRTAP21-2Q3LI59 83 aa2.43□□□□□ -2.02
SNHG4-208ENST00000514110 KRTAP4-4Q9BYR3 166 aa2.38□□□□□ -2.03
SNHG4-208ENST00000514110 MUC19Q7Z5P9 8384 aa2.1□□□□□ -2.07
SNHG4-208ENST00000514110 PRM1P04553 51 aa1.85□□□□□ -2.11
SNHG4-208ENST00000514110 KRTAP21-1Q3LI58 79 aa1.85□□□□□ -2.11
SNHG4-208ENST00000514110 MUC16Q8WXI7 14507 aa1.57□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 7.9 ms