RNA–Protein interactions for RNA: ENST00000513060.5

RACK1-230, Transcript of receptor for activated C kinase 1, humanhuman

TSL 5

Gene RACK1, Length 1,651 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-230ENST00000513060 SPRR2EP22531 72 aa4.92□□□□□ -1.62
RACK1-230ENST00000513060 SPRR2BP35325 72 aa4.92□□□□□ -1.62
RACK1-230ENST00000513060 SPRR2AP35326 72 aa4.92□□□□□ -1.62
RACK1-230ENST00000513060 LCE1AQ5T7P2 110 aa4.92□□□□□ -1.62
RACK1-230ENST00000513060 MT1LQ93083 61 aa4.88□□□□□ -1.63
RACK1-230ENST00000513060 NEBP20929 6669 aa4.87□□□□□ -1.63
RACK1-230ENST00000513060 KRTAP19-3Q7Z4W3 81 aa4.87□□□□□ -1.63
RACK1-230ENST00000513060 KRTAP15-1Q3LI76 137 aa4.85□□□□□ -1.63
RACK1-230ENST00000513060 LCE5AQ5TCM9 118 aa4.82□□□□□ -1.64
RACK1-230ENST00000513060 MT1GP13640 62 aa4.81□□□□□ -1.64
RACK1-230ENST00000513060 SPRR2DP22532 72 aa4.74□□□□□ -1.65
RACK1-230ENST00000513060 MT1MQ8N339 61 aa4.73□□□□□ -1.65
RACK1-230ENST00000513060 KRTAP19-4Q3LI73 84 aa4.71□□□□□ -1.66
RACK1-230ENST00000513060 KRTAP4-7Q9BYR0 210 aa4.7□□□□□ -1.66
RACK1-230ENST00000513060 LCE3CQ5T5A8 94 aa4.67□□□□□ -1.66
RACK1-230ENST00000513060 KRTAP4-3Q9BYR4 195 aa4.64□□□□□ -1.67
RACK1-230ENST00000513060 DSTQ03001 7570 aaKnown RBP4.64□□□□□ -1.67
RACK1-230ENST00000513060 LCE3BQ5TA77 95 aa4.57□□□□□ -1.68
RACK1-230ENST00000513060 KRTAP2-3P0C7H8 128 aa4.57□□□□□ -1.68
RACK1-230ENST00000513060 KRTAP2-4Q9BYR9 128 aa4.57□□□□□ -1.68
RACK1-230ENST00000513060 KRTAP20-1Q3LI63 56 aa4.56□□□□□ -1.68
RACK1-230ENST00000513060 KRTAP2-2Q9BYT5 123 aa4.46□□□□□ -1.7
RACK1-230ENST00000513060 KRTAP2-1Q9BYU5 128 aa4.46□□□□□ -1.7
RACK1-230ENST00000513060 LOC100996750A0A140TA64 210 aa4.42□□□□□ -1.7
RACK1-230ENST00000513060 KRTAP9-6A8MVA2 160 aa4.41□□□□□ -1.7
RACK1-230ENST00000513060 SPRR5A0A1B0GTR4 108 aa4.37□□□□□ -1.71
RACK1-230ENST00000513060 KRTAP5-5Q701N2 237 aaPredicted RBP4.29□□□□□ -1.72
RACK1-230ENST00000513060 KRTAP5-4Q6L8H1 288 aa4.22□□□□□ -1.73
RACK1-230ENST00000513060 LCE4AQ5TA78 99 aa4.19□□□□□ -1.74
RACK1-230ENST00000513060 KRTAP4-9Q9BYQ8 210 aa4.16□□□□□ -1.74
RACK1-230ENST00000513060 MT1AP04731 61 aa4.14□□□□□ -1.75
RACK1-230ENST00000513060 MT4P47944 62 aa4.13□□□□□ -1.75
RACK1-230ENST00000513060 LUZP6Q538Z0 58 aa4.12□□□□□ -1.75
RACK1-230ENST00000513060 KRTAP6-1Q3LI64 71 aa4.11□□□□□ -1.75
RACK1-230ENST00000513060 LCE1DQ5T752 114 aa4.1□□□□□ -1.75
RACK1-230ENST00000513060 KRTAP12-4P60329 112 aa4.07□□□□□ -1.76
RACK1-230ENST00000513060 KRTAP4-6Q9BYQ5 205 aa4.06□□□□□ -1.76
RACK1-230ENST00000513060 SYNE1Q8NF91 8797 aaKnown RBP4.06□□□□□ -1.76
RACK1-230ENST00000513060 HMCN1Q96RW7 5635 aa4.05□□□□□ -1.76
RACK1-230ENST00000513060 KRTAP20-2Q3LI61 65 aa3.97□□□□□ -1.77
RACK1-230ENST00000513060 KRTAP9-4Q9BYQ2 154 aa3.96□□□□□ -1.78
RACK1-230ENST00000513060 KRTAP6-2Q3LI66 62 aa3.84□□□□□ -1.8
RACK1-230ENST00000513060 NDUFAF8A1L188 74 aa3.82□□□□□ -1.8
RACK1-230ENST00000513060 KRTAP5-3Q6L8H2 238 aa3.82□□□□□ -1.8
RACK1-230ENST00000513060 MT3P25713 68 aa3.78□□□□□ -1.81
RACK1-230ENST00000513060 KRTAP5-2Q701N4 177 aa3.78□□□□□ -1.81
RACK1-230ENST00000513060 AHNAK2Q8IVF2 5795 aa3.69□□□□□ -1.82
RACK1-230ENST00000513060 OBSCNQ5VST9 7968 aa3.58□□□□□ -1.84
RACK1-230ENST00000513060 H3BS24 57 aa3.57□□□□□ -1.84
RACK1-230ENST00000513060 GPR98Q8WXG9 6306 aa3.56□□□□□ -1.84
RACK1-230ENST00000513060 KRTAP5-10Q6L8G5 202 aa3.55□□□□□ -1.84
RACK1-230ENST00000513060 KRTAP4-11Q9BYQ6 195 aa3.51□□□□□ -1.85
RACK1-230ENST00000513060 LCE3DQ9BYE3 92 aa3.46□□□□□ -1.85
RACK1-230ENST00000513060 KRTAP5-8O75690 187 aa3.37□□□□□ -1.87
RACK1-230ENST00000513060 LCE3EQ5T5B0 92 aa3.33□□□□□ -1.88
RACK1-230ENST00000513060 LCE1EQ5T753 118 aa3.33□□□□□ -1.88
RACK1-230ENST00000513060 KRTAP5-7Q6L8G8 165 aa3.33□□□□□ -1.88
RACK1-230ENST00000513060 KRTAP5-1Q6L8H4 278 aa3.32□□□□□ -1.88
RACK1-230ENST00000513060 A0A0A0MQY5 61 aa3.27□□□□□ -1.89
RACK1-230ENST00000513060 MUC5ACP98088 5654 aa3.23□□□□□ -1.89
RACK1-230ENST00000513060 LCE1BQ5T7P3 118 aa3.14□□□□□ -1.91
RACK1-230ENST00000513060 INE1O15225 51 aa3.12□□□□□ -1.91
RACK1-230ENST00000513060 KRTAP4-2Q9BYR5 136 aa3.12□□□□□ -1.91
RACK1-230ENST00000513060 LCE1CQ5T751 118 aa3.11□□□□□ -1.91
RACK1-230ENST00000513060 KRTAP9-9Q9BYP9 154 aa3.11□□□□□ -1.91
RACK1-230ENST00000513060 MUC5BQ9HC84 5762 aaPredicted RBP3.01□□□□□ -1.93
RACK1-230ENST00000513060 AHNAKQ09666 5890 aaKnown RBP2.89□□□□□ -1.95
RACK1-230ENST00000513060 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.87□□□□□ -1.95
RACK1-230ENST00000513060 PRM1P04553 51 aa2.79□□□□□ -1.96
RACK1-230ENST00000513060 KRTAP5-11Q6L8G4 156 aa2.76□□□□□ -1.97
RACK1-230ENST00000513060 KRTAP21-2Q3LI59 83 aa2.69□□□□□ -1.98
RACK1-230ENST00000513060 KRTAP4-12Q9BQ66 201 aa2.69□□□□□ -1.98
RACK1-230ENST00000513060 LCE1FQ5T754 118 aa2.56□□□□□ -2
RACK1-230ENST00000513060 KRTAP4-4Q9BYR3 166 aa2.43□□□□□ -2.02
RACK1-230ENST00000513060 PHGR1C9JFL3 82 aa2.37□□□□□ -2.03
RACK1-230ENST00000513060 MUC19Q7Z5P9 8384 aa2.16□□□□□ -2.06
RACK1-230ENST00000513060 KRTAP21-1Q3LI58 79 aa1.64□□□□□ -2.15
RACK1-230ENST00000513060 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 97.8 ms