RNA–Protein interactions for RNA: ENST00000510056.5

MATR3-215, Transcript of matrin 3, humanhuman

TSL 5 BASIC

Gene MATR3, Length 3,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-215ENST00000510056 PLAC4Q8WY50 150 aa2.93□□□□□ -1.94
MATR3-215ENST00000510056 KRTAP19-6Q3LI70 58 aa2.92□□□□□ -1.94
MATR3-215ENST00000510056 KRTAP20-1Q3LI63 56 aa2.91□□□□□ -1.94
MATR3-215ENST00000510056 NEBP20929 6669 aa2.91□□□□□ -1.94
MATR3-215ENST00000510056 S4R3F8 94 aa2.89□□□□□ -1.95
MATR3-215ENST00000510056 MUC12Q9UKN1 5478 aa2.88□□□□□ -1.95
MATR3-215ENST00000510056 PP632Q6XCG6 107 aa2.87□□□□□ -1.95
MATR3-215ENST00000510056 M0QZ58 72 aa2.87□□□□□ -1.95
MATR3-215ENST00000510056 LCE3DQ9BYE3 92 aa2.85□□□□□ -1.95
MATR3-215ENST00000510056 KRTAP12-2P59991 146 aa2.79□□□□□ -1.96
MATR3-215ENST00000510056 MDN1Q9NU22 5596 aa2.79□□□□□ -1.96
MATR3-215ENST00000510056 KMT2DO14686 5537 aa2.77□□□□□ -1.97
MATR3-215ENST00000510056 KRTAP5-3Q6L8H2 238 aa2.76□□□□□ -1.97
MATR3-215ENST00000510056 KRTAP2-3P0C7H8 128 aa2.74□□□□□ -1.97
MATR3-215ENST00000510056 KRTAP2-4Q9BYR9 128 aa2.74□□□□□ -1.97
MATR3-215ENST00000510056 SPRR5A0A1B0GTR4 108 aa2.73□□□□□ -1.97
MATR3-215ENST00000510056 KRTAP10-7P60409 375 aaPredicted RBP2.71□□□□□ -1.98
MATR3-215ENST00000510056 KRTAP5-9P26371 169 aa2.7□□□□□ -1.98
MATR3-215ENST00000510056 C10orf95Q9H7T3 257 aa2.69□□□□□ -1.98
MATR3-215ENST00000510056 A0A0D9SG42 100 aa2.68□□□□□ -1.98
MATR3-215ENST00000510056 SPRR2EP22531 72 aa2.65□□□□□ -1.99
MATR3-215ENST00000510056 SPRR2BP35325 72 aa2.65□□□□□ -1.99
MATR3-215ENST00000510056 SPRR2AP35326 72 aa2.65□□□□□ -1.99
MATR3-215ENST00000510056 KRTAP2-1Q9BYU5 128 aa2.64□□□□□ -1.99
MATR3-215ENST00000510056 MT1BP07438 61 aa2.63□□□□□ -1.99
MATR3-215ENST00000510056 SPRR2FQ96RM1 72 aa2.62□□□□□ -1.99
MATR3-215ENST00000510056 KRTAP10-5P60370 271 aa2.61□□□□□ -1.99
MATR3-215ENST00000510056 GPR98Q8WXG9 6306 aa2.58□□□□□ -2
MATR3-215ENST00000510056 SPRR2DP22532 72 aa2.55□□□□□ -2
MATR3-215ENST00000510056 KRTAP19-8Q3LI54 63 aa2.54□□□□□ -2
MATR3-215ENST00000510056 SPRR2GQ9BYE4 73 aa2.52□□□□□ -2.01
MATR3-215ENST00000510056 KRTAP8-1Q8IUC2 63 aa2.5□□□□□ -2.01
MATR3-215ENST00000510056 TNP1P09430 55 aa2.49□□□□□ -2.01
MATR3-215ENST00000510056 DSTQ03001 7570 aaKnown RBP2.45□□□□□ -2.02
MATR3-215ENST00000510056 KRTAP12-4P60329 112 aa2.45□□□□□ -2.02
MATR3-215ENST00000510056 KRTAP12-3P60328 96 aa2.43□□□□□ -2.02
MATR3-215ENST00000510056 MT1XP80297 61 aa2.39□□□□□ -2.03
MATR3-215ENST00000510056 HMCN1Q96RW7 5635 aa2.32□□□□□ -2.04
MATR3-215ENST00000510056 MT4P47944 62 aa2.29□□□□□ -2.04
MATR3-215ENST00000510056 LCE3AQ5TA76 89 aa2.29□□□□□ -2.04
MATR3-215ENST00000510056 AHNAK2Q8IVF2 5795 aa2.29□□□□□ -2.04
MATR3-215ENST00000510056 KRTAP5-10Q6L8G5 202 aa2.27□□□□□ -2.05
MATR3-215ENST00000510056 KRTAP5-11Q6L8G4 156 aa2.21□□□□□ -2.06
MATR3-215ENST00000510056 KRTAP5-7Q6L8G8 165 aa2.2□□□□□ -2.06
MATR3-215ENST00000510056 KRTAP19-3Q7Z4W3 81 aa2.17□□□□□ -2.06
MATR3-215ENST00000510056 MUC19Q7Z5P9 8384 aa2.14□□□□□ -2.07
MATR3-215ENST00000510056 KRTAP9-6A8MVA2 160 aa2.14□□□□□ -2.07
MATR3-215ENST00000510056 KRTAP19-7Q3SYF9 63 aa2.14□□□□□ -2.07
MATR3-215ENST00000510056 MT1EP04732 61 aa2.13□□□□□ -2.07
MATR3-215ENST00000510056 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.09□□□□□ -2.07
MATR3-215ENST00000510056 KRTAP5-4Q6L8H1 288 aa2.09□□□□□ -2.07
MATR3-215ENST00000510056 KRTAP4-3Q9BYR4 195 aa2.08□□□□□ -2.08
MATR3-215ENST00000510056 KRTAP19-5Q3LI72 72 aa2.08□□□□□ -2.08
MATR3-215ENST00000510056 MT1GP13640 62 aa2.07□□□□□ -2.08
MATR3-215ENST00000510056 MT1MQ8N339 61 aa2.06□□□□□ -2.08
MATR3-215ENST00000510056 KRTAP20-2Q3LI61 65 aa2.02□□□□□ -2.09
MATR3-215ENST00000510056 MT1LQ93083 61 aa1.99□□□□□ -2.09
MATR3-215ENST00000510056 AHNAKQ09666 5890 aaKnown RBP1.96□□□□□ -2.1
MATR3-215ENST00000510056 MUC5ACP98088 5654 aa1.94□□□□□ -2.1
MATR3-215ENST00000510056 MUC5BQ9HC84 5762 aaPredicted RBP1.94□□□□□ -2.1
MATR3-215ENST00000510056 SYNE1Q8NF91 8797 aaKnown RBP1.91□□□□□ -2.1
MATR3-215ENST00000510056 LCE1CQ5T751 118 aa1.91□□□□□ -2.1
MATR3-215ENST00000510056 LCE1BQ5T7P3 118 aa1.91□□□□□ -2.1
MATR3-215ENST00000510056 KRTAP5-8O75690 187 aa1.89□□□□□ -2.11
MATR3-215ENST00000510056 KRTAP5-5Q701N2 237 aaPredicted RBP1.88□□□□□ -2.11
MATR3-215ENST00000510056 KRTAP5-1Q6L8H4 278 aa1.88□□□□□ -2.11
MATR3-215ENST00000510056 OBSCNQ5VST9 7968 aa1.84□□□□□ -2.11
MATR3-215ENST00000510056 MT1AP04731 61 aa1.83□□□□□ -2.12
MATR3-215ENST00000510056 KRTAP5-2Q701N4 177 aa1.77□□□□□ -2.13
MATR3-215ENST00000510056 KRTAP4-4Q9BYR3 166 aa1.77□□□□□ -2.13
MATR3-215ENST00000510056 KRTAP6-1Q3LI64 71 aa1.72□□□□□ -2.13
MATR3-215ENST00000510056 KRTAP6-2Q3LI66 62 aa1.7□□□□□ -2.14
MATR3-215ENST00000510056 PRM1P04553 51 aa1.57□□□□□ -2.16
MATR3-215ENST00000510056 PHGR1C9JFL3 82 aa1.37□□□□□ -2.19
MATR3-215ENST00000510056 KRTAP21-1Q3LI58 79 aa1.12□□□□□ -2.23
MATR3-215ENST00000510056 KRTAP21-2Q3LI59 83 aa1.12□□□□□ -2.23
MATR3-215ENST00000510056 MUC16Q8WXI7 14507 aa0.75□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 100 ms