RNA–Protein interactions for RNA: ENST00000507900.5

DDX41-207, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 1,564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-207ENST00000507900 LUZP6Q538Z0 58 aa5.82□□□□□ -1.48
DDX41-207ENST00000507900 SPRR2FQ96RM1 72 aa5.77□□□□□ -1.49
DDX41-207ENST00000507900 NDUFAF8A1L188 74 aa5.76□□□□□ -1.49
DDX41-207ENST00000507900 KRTAP19-3Q7Z4W3 81 aa5.75□□□□□ -1.49
DDX41-207ENST00000507900 NEBP20929 6669 aa5.73□□□□□ -1.49
DDX41-207ENST00000507900 KRTAP5-9P26371 169 aa5.73□□□□□ -1.49
DDX41-207ENST00000507900 MT1GP13640 62 aa5.71□□□□□ -1.5
DDX41-207ENST00000507900 KRTAP4-7Q9BYR0 210 aa5.68□□□□□ -1.5
DDX41-207ENST00000507900 KRTAP6-3Q3LI67 103 aa5.66□□□□□ -1.5
DDX41-207ENST00000507900 MUC12Q9UKN1 5478 aa5.66□□□□□ -1.5
DDX41-207ENST00000507900 LCE5AQ5TCM9 118 aa5.64□□□□□ -1.51
DDX41-207ENST00000507900 MT1MQ8N339 61 aa5.64□□□□□ -1.51
DDX41-207ENST00000507900 KRTAP9-6A8MVA2 160 aa5.57□□□□□ -1.52
DDX41-207ENST00000507900 KRTAP20-1Q3LI63 56 aa5.55□□□□□ -1.52
DDX41-207ENST00000507900 LCE1AQ5T7P2 110 aa5.54□□□□□ -1.52
DDX41-207ENST00000507900 KRTAP4-3Q9BYR4 195 aa5.5□□□□□ -1.53
DDX41-207ENST00000507900 SPRR2EP22531 72 aa5.45□□□□□ -1.54
DDX41-207ENST00000507900 SPRR2BP35325 72 aa5.45□□□□□ -1.54
DDX41-207ENST00000507900 SPRR2AP35326 72 aa5.45□□□□□ -1.54
DDX41-207ENST00000507900 MDN1Q9NU22 5596 aa5.4□□□□□ -1.55
DDX41-207ENST00000507900 LOC100996750A0A140TA64 210 aa5.33□□□□□ -1.56
DDX41-207ENST00000507900 SPRR2DP22532 72 aa5.25□□□□□ -1.57
DDX41-207ENST00000507900 KRTAP2-3P0C7H8 128 aa5.21□□□□□ -1.57
DDX41-207ENST00000507900 KRTAP2-4Q9BYR9 128 aa5.21□□□□□ -1.57
DDX41-207ENST00000507900 KRTAP2-1Q9BYU5 128 aa5.21□□□□□ -1.57
DDX41-207ENST00000507900 H3BS24 57 aa5.21□□□□□ -1.58
DDX41-207ENST00000507900 DSTQ03001 7570 aaKnown RBP5.16□□□□□ -1.58
DDX41-207ENST00000507900 GPR98Q8WXG9 6306 aa5.12□□□□□ -1.59
DDX41-207ENST00000507900 KRTAP5-5Q701N2 237 aaPredicted RBP5.11□□□□□ -1.59
DDX41-207ENST00000507900 A0A0A0MQY5 61 aa5.08□□□□□ -1.6
DDX41-207ENST00000507900 LCE3BQ5TA77 95 aa5.04□□□□□ -1.6
DDX41-207ENST00000507900 MT1AP04731 61 aa5.02□□□□□ -1.61
DDX41-207ENST00000507900 KRTAP2-2Q9BYT5 123 aa5.01□□□□□ -1.61
DDX41-207ENST00000507900 KRTAP6-1Q3LI64 71 aa4.95□□□□□ -1.62
DDX41-207ENST00000507900 KRTAP5-4Q6L8H1 288 aa4.82□□□□□ -1.64
DDX41-207ENST00000507900 INE1O15225 51 aa4.79□□□□□ -1.64
DDX41-207ENST00000507900 KRTAP9-4Q9BYQ2 154 aa4.75□□□□□ -1.65
DDX41-207ENST00000507900 SYNE1Q8NF91 8797 aaKnown RBP4.74□□□□□ -1.65
DDX41-207ENST00000507900 LCE4AQ5TA78 99 aa4.7□□□□□ -1.66
DDX41-207ENST00000507900 KRTAP12-4P60329 112 aa4.66□□□□□ -1.66
DDX41-207ENST00000507900 KRTAP4-9Q9BYQ8 210 aa4.6□□□□□ -1.67
DDX41-207ENST00000507900 KRTAP6-2Q3LI66 62 aa4.53□□□□□ -1.68
DDX41-207ENST00000507900 KRTAP4-6Q9BYQ5 205 aa4.53□□□□□ -1.68
DDX41-207ENST00000507900 MT3P25713 68 aa4.53□□□□□ -1.69
DDX41-207ENST00000507900 MT4P47944 62 aa4.53□□□□□ -1.69
DDX41-207ENST00000507900 HMCN1Q96RW7 5635 aa4.5□□□□□ -1.69
DDX41-207ENST00000507900 AHNAK2Q8IVF2 5795 aa4.49□□□□□ -1.69
DDX41-207ENST00000507900 KRTAP20-2Q3LI61 65 aa4.48□□□□□ -1.69
DDX41-207ENST00000507900 LCE1DQ5T752 114 aa4.46□□□□□ -1.7
DDX41-207ENST00000507900 LCE3DQ9BYE3 92 aa4.42□□□□□ -1.7
DDX41-207ENST00000507900 KRTAP5-2Q701N4 177 aa4.4□□□□□ -1.7
DDX41-207ENST00000507900 KRTAP5-10Q6L8G5 202 aa4.4□□□□□ -1.71
DDX41-207ENST00000507900 KRTAP5-3Q6L8H2 238 aa4.33□□□□□ -1.72
DDX41-207ENST00000507900 LCE3EQ5T5B0 92 aa4.31□□□□□ -1.72
DDX41-207ENST00000507900 KRTAP5-7Q6L8G8 165 aa4.28□□□□□ -1.72
DDX41-207ENST00000507900 OBSCNQ5VST9 7968 aa4.08□□□□□ -1.76
DDX41-207ENST00000507900 LCE1EQ5T753 118 aa3.93□□□□□ -1.78
DDX41-207ENST00000507900 AHNAKQ09666 5890 aaKnown RBP3.87□□□□□ -1.79
DDX41-207ENST00000507900 KRTAP4-11Q9BYQ6 195 aa3.85□□□□□ -1.79
DDX41-207ENST00000507900 MUC5ACP98088 5654 aa3.81□□□□□ -1.8
DDX41-207ENST00000507900 PRM1P04553 51 aa3.8□□□□□ -1.8
DDX41-207ENST00000507900 MUC5BQ9HC84 5762 aaPredicted RBP3.78□□□□□ -1.8
DDX41-207ENST00000507900 KRTAP5-1Q6L8H4 278 aa3.77□□□□□ -1.81
DDX41-207ENST00000507900 KRTAP5-8O75690 187 aa3.72□□□□□ -1.81
DDX41-207ENST00000507900 LCE1CQ5T751 118 aa3.67□□□□□ -1.82
DDX41-207ENST00000507900 LCE1BQ5T7P3 118 aa3.67□□□□□ -1.82
DDX41-207ENST00000507900 KRTAP4-2Q9BYR5 136 aa3.66□□□□□ -1.82
DDX41-207ENST00000507900 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.46□□□□□ -1.85
DDX41-207ENST00000507900 KRTAP9-9Q9BYP9 154 aa3.42□□□□□ -1.86
DDX41-207ENST00000507900 KRTAP21-2Q3LI59 83 aa3.26□□□□□ -1.89
DDX41-207ENST00000507900 KRTAP5-11Q6L8G4 156 aa3.23□□□□□ -1.89
DDX41-207ENST00000507900 KRTAP4-12Q9BQ66 201 aa2.95□□□□□ -1.94
DDX41-207ENST00000507900 LCE1FQ5T754 118 aa2.89□□□□□ -1.95
DDX41-207ENST00000507900 KRTAP4-4Q9BYR3 166 aa2.83□□□□□ -1.96
DDX41-207ENST00000507900 PHGR1C9JFL3 82 aa2.77□□□□□ -1.97
DDX41-207ENST00000507900 KRTAP21-1Q3LI58 79 aa2.37□□□□□ -2.03
DDX41-207ENST00000507900 MUC19Q7Z5P9 8384 aa2.35□□□□□ -2.03
DDX41-207ENST00000507900 MUC16Q8WXI7 14507 aa1.8□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 139.6 ms