RNA–Protein interactions for RNA: ENST00000505712.5

LINC01339-201, Transcript of long intergenic non-protein coding RNA 1339, humanhuman

TSL 2 BASIC

Gene LINC01339, Length 440 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01339-201ENST00000505712 KRTAP19-2Q3LHN2 52 aa2.56□□□□□ -2
LINC01339-201ENST00000505712 M0QZ58 72 aa2.54□□□□□ -2
LINC01339-201ENST00000505712 KRTAP12-1P59990 96 aa2.53□□□□□ -2
LINC01339-201ENST00000505712 CRIPTQ9P021 101 aa2.52□□□□□ -2.01
LINC01339-201ENST00000505712 MT1HP80294 61 aa2.5□□□□□ -2.01
LINC01339-201ENST00000505712 SPINT4Q6UDR6 99 aa2.49□□□□□ -2.01
LINC01339-201ENST00000505712 FLGP20930 4061 aaPredicted RBP2.47□□□□□ -2.01
LINC01339-201ENST00000505712 CRCT1Q9UGL9 99 aa2.46□□□□□ -2.02
LINC01339-201ENST00000505712 FSIP2Q5CZC0 6907 aa2.46□□□□□ -2.02
LINC01339-201ENST00000505712 C10orf95Q9H7T3 257 aa2.45□□□□□ -2.02
LINC01339-201ENST00000505712 R4GN34 69 aa2.44□□□□□ -2.02
LINC01339-201ENST00000505712 USH2AO75445 5202 aa2.42□□□□□ -2.02
LINC01339-201ENST00000505712 SSPOA2VEC9 5147 aa2.4□□□□□ -2.03
LINC01339-201ENST00000505712 M0R2T5 61 aa2.36□□□□□ -2.03
LINC01339-201ENST00000505712 FCGBPQ9Y6R7 5405 aaPredicted RBP2.35□□□□□ -2.03
LINC01339-201ENST00000505712 KRTAP10-10P60014 251 aa2.35□□□□□ -2.03
LINC01339-201ENST00000505712 KRTAP5-7Q6L8G8 165 aa2.34□□□□□ -2.03
LINC01339-201ENST00000505712 MUC19Q7Z5P9 8384 aa2.33□□□□□ -2.04
LINC01339-201ENST00000505712 MT2AP02795 61 aa2.32□□□□□ -2.04
LINC01339-201ENST00000505712 MT1FP04733 61 aa2.31□□□□□ -2.04
LINC01339-201ENST00000505712 CAMK2N1Q7Z7J9 78 aa2.31□□□□□ -2.04
LINC01339-201ENST00000505712 SPRR2GQ9BYE4 73 aa2.28□□□□□ -2.04
LINC01339-201ENST00000505712 PLAC4Q8WY50 150 aa2.26□□□□□ -2.05
LINC01339-201ENST00000505712 TNP1P09430 55 aa2.25□□□□□ -2.05
LINC01339-201ENST00000505712 KRTAP19-6Q3LI70 58 aa2.21□□□□□ -2.06
LINC01339-201ENST00000505712 KRTAP19-8Q3LI54 63 aa2.2□□□□□ -2.06
LINC01339-201ENST00000505712 MACF1Q9UPN3 7388 aaKnown RBP2.2□□□□□ -2.06
LINC01339-201ENST00000505712 SPRR5A0A1B0GTR4 108 aa2.18□□□□□ -2.06
LINC01339-201ENST00000505712 MT1BP07438 61 aa2.16□□□□□ -2.06
LINC01339-201ENST00000505712 MT1XP80297 61 aa2.13□□□□□ -2.07
LINC01339-201ENST00000505712 MUC12Q9UKN1 5478 aa2.12□□□□□ -2.07
LINC01339-201ENST00000505712 KRTAP6-3Q3LI67 103 aa2.12□□□□□ -2.07
LINC01339-201ENST00000505712 LUZP6Q538Z0 58 aa2.12□□□□□ -2.07
LINC01339-201ENST00000505712 SYNE2Q8WXH0 6885 aaKnown RBP2.12□□□□□ -2.07
LINC01339-201ENST00000505712 KRTAP8-1Q8IUC2 63 aa2.11□□□□□ -2.07
LINC01339-201ENST00000505712 MDN1Q9NU22 5596 aa2.09□□□□□ -2.08
LINC01339-201ENST00000505712 KMT2DO14686 5537 aa2.07□□□□□ -2.08
LINC01339-201ENST00000505712 NEBP20929 6669 aa2.05□□□□□ -2.08
LINC01339-201ENST00000505712 KRTAP21-2Q3LI59 83 aa2.04□□□□□ -2.08
LINC01339-201ENST00000505712 KRTAP12-3P60328 96 aa2.03□□□□□ -2.08
LINC01339-201ENST00000505712 PRO2289Q9P1D8 64 aa2.03□□□□□ -2.08
LINC01339-201ENST00000505712 HMCN1Q96RW7 5635 aa1.99□□□□□ -2.09
LINC01339-201ENST00000505712 KRTAP20-1Q3LI63 56 aa1.99□□□□□ -2.09
LINC01339-201ENST00000505712 KRTAP19-5Q3LI72 72 aa1.96□□□□□ -2.1
LINC01339-201ENST00000505712 SPRR2FQ96RM1 72 aa1.92□□□□□ -2.1
LINC01339-201ENST00000505712 SPRR2EP22531 72 aa1.91□□□□□ -2.1
LINC01339-201ENST00000505712 SPRR2BP35325 72 aa1.91□□□□□ -2.1
LINC01339-201ENST00000505712 SPRR2AP35326 72 aa1.91□□□□□ -2.1
LINC01339-201ENST00000505712 KRTAP2-3P0C7H8 128 aa1.9□□□□□ -2.11
LINC01339-201ENST00000505712 KRTAP2-4Q9BYR9 128 aa1.9□□□□□ -2.11
LINC01339-201ENST00000505712 KRTAP19-7Q3SYF9 63 aa1.89□□□□□ -2.11
LINC01339-201ENST00000505712 INE1O15225 51 aa1.86□□□□□ -2.11
LINC01339-201ENST00000505712 MT1EP04732 61 aa1.84□□□□□ -2.11
LINC01339-201ENST00000505712 SPRR2DP22532 72 aa1.84□□□□□ -2.11
LINC01339-201ENST00000505712 MT1LQ93083 61 aa1.84□□□□□ -2.11
LINC01339-201ENST00000505712 KRTAP2-1Q9BYU5 128 aa1.84□□□□□ -2.11
LINC01339-201ENST00000505712 KRTAP12-4P60329 112 aa1.83□□□□□ -2.12
LINC01339-201ENST00000505712 GPR98Q8WXG9 6306 aa1.76□□□□□ -2.13
LINC01339-201ENST00000505712 MT1MQ8N339 61 aa1.73□□□□□ -2.13
LINC01339-201ENST00000505712 MT1GP13640 62 aa1.72□□□□□ -2.13
LINC01339-201ENST00000505712 KRTAP19-3Q7Z4W3 81 aa1.72□□□□□ -2.13
LINC01339-201ENST00000505712 DSTQ03001 7570 aaKnown RBP1.7□□□□□ -2.14
LINC01339-201ENST00000505712 AHNAK2Q8IVF2 5795 aa1.68□□□□□ -2.14
LINC01339-201ENST00000505712 MT4P47944 62 aa1.62□□□□□ -2.15
LINC01339-201ENST00000505712 KRTAP5-10Q6L8G5 202 aa1.6□□□□□ -2.15
LINC01339-201ENST00000505712 MT1AP04731 61 aa1.56□□□□□ -2.16
LINC01339-201ENST00000505712 KRTAP6-1Q3LI64 71 aa1.55□□□□□ -2.16
LINC01339-201ENST00000505712 KRTAP20-2Q3LI61 65 aa1.53□□□□□ -2.16
LINC01339-201ENST00000505712 SYNE1Q8NF91 8797 aaKnown RBP1.47□□□□□ -2.17
LINC01339-201ENST00000505712 AHNAKQ09666 5890 aaKnown RBP1.39□□□□□ -2.19
LINC01339-201ENST00000505712 KRTAP6-2Q3LI66 62 aa1.39□□□□□ -2.19
LINC01339-201ENST00000505712 MUC5ACP98088 5654 aa1.39□□□□□ -2.19
LINC01339-201ENST00000505712 MUC5BQ9HC84 5762 aaPredicted RBP1.38□□□□□ -2.19
LINC01339-201ENST00000505712 PRM1P04553 51 aa1.37□□□□□ -2.19
LINC01339-201ENST00000505712 MUC16Q8WXI7 14507 aa0.97□□□□□ -2.25
LINC01339-201ENST00000505712 PHGR1C9JFL3 82 aa0.91□□□□□ -2.26
LINC01339-201ENST00000505712 KRTAP21-1Q3LI58 79 aa0.88□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 360 ms