RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 KRTAP19-6Q3LI70 58 aa0.74□□□□□ -2.29
TRAPPC13-208ENST00000505553 UBL5Q9BZL1 73 aa0.74□□□□□ -2.29
TRAPPC13-208ENST00000505553 FXYD6Q9H0Q3 95 aa0.74□□□□□ -2.29
TRAPPC13-208ENST00000505553 KRTAP2-1Q9BYU5 128 aa0.73□□□□□ -2.29
TRAPPC13-208ENST00000505553 DSTQ03001 7570 aaKnown RBP0.73□□□□□ -2.29
TRAPPC13-208ENST00000505553 MUC5ACP98088 5654 aa0.73□□□□□ -2.29
TRAPPC13-208ENST00000505553 IAPPP10997 89 aa0.72□□□□□ -2.29
TRAPPC13-208ENST00000505553 Q8IZM0 81 aa0.72□□□□□ -2.29
TRAPPC13-208ENST00000505553 NMES1Q9C002 83 aa0.72□□□□□ -2.29
TRAPPC13-208ENST00000505553 C9orf92A6NGG3 77 aa0.72□□□□□ -2.29
TRAPPC13-208ENST00000505553 K7EQZ3 153 aa0.72□□□□□ -2.29
TRAPPC13-208ENST00000505553 MT2AP02795 61 aa0.72□□□□□ -2.29
TRAPPC13-208ENST00000505553 SPRR2EP22531 72 aa0.72□□□□□ -2.29
TRAPPC13-208ENST00000505553 SPRR2BP35325 72 aa0.72□□□□□ -2.29
TRAPPC13-208ENST00000505553 SPRR2AP35326 72 aa0.72□□□□□ -2.29
TRAPPC13-208ENST00000505553 K7EMI3 77 aa0.71□□□□□ -2.3
TRAPPC13-208ENST00000505553 SPINK1P00995 79 aa0.71□□□□□ -2.3
TRAPPC13-208ENST00000505553 MT1FP04733 61 aa0.71□□□□□ -2.3
TRAPPC13-208ENST00000505553 MRPL34Q9BQ48 92 aaKnown RBP0.71□□□□□ -2.3
TRAPPC13-208ENST00000505553 FLGP20930 4061 aaPredicted RBP0.7□□□□□ -2.3
TRAPPC13-208ENST00000505553 NDUFA1O15239 70 aa0.7□□□□□ -2.3
TRAPPC13-208ENST00000505553 SPRR2DP22532 72 aa0.7□□□□□ -2.3
TRAPPC13-208ENST00000505553 RPS29P62273 56 aaKnown RBP0.69□□□□□ -2.3
TRAPPC13-208ENST00000505553 SPRR2FQ96RM1 72 aa0.69□□□□□ -2.3
TRAPPC13-208ENST00000505553 ETDCA0A1B0GVM5 59 aa0.68□□□□□ -2.3
TRAPPC13-208ENST00000505553 PRLHP81277 87 aa0.68□□□□□ -2.3
TRAPPC13-208ENST00000505553 C6orf48Q9UBA6 75 aa0.67□□□□□ -2.3
TRAPPC13-208ENST00000505553 M0QY20 66 aa0.66□□□□□ -2.3
TRAPPC13-208ENST00000505553 SPRR1AP35321 89 aa0.66□□□□□ -2.3
TRAPPC13-208ENST00000505553 CRIP1P50238 77 aa0.66□□□□□ -2.3
TRAPPC13-208ENST00000505553 KCNQ1DNQ9H478 68 aa0.66□□□□□ -2.3
TRAPPC13-208ENST00000505553 SPRR1BP22528 89 aa0.65□□□□□ -2.3
TRAPPC13-208ENST00000505553 H1FX-AS1Q4G0G2 97 aa0.65□□□□□ -2.3
TRAPPC13-208ENST00000505553 DEFB105AQ8NG35 78 aa0.65□□□□□ -2.3
TRAPPC13-208ENST00000505553 TOMM7Q9P0U1 55 aa0.65□□□□□ -2.3
TRAPPC13-208ENST00000505553 CDKN2A-AS1Q9UH64 79 aa0.65□□□□□ -2.3
TRAPPC13-208ENST00000505553 LINC00158P58513 81 aa0.64□□□□□ -2.31
TRAPPC13-208ENST00000505553 SERF2P84101 59 aa0.64□□□□□ -2.31
TRAPPC13-208ENST00000505553 KRTAP8-1Q8IUC2 63 aa0.64□□□□□ -2.31
TRAPPC13-208ENST00000505553 RPL39LQ96EH5 51 aaKnown RBP0.64□□□□□ -2.31
TRAPPC13-208ENST00000505553 TMEM167BQ9NRX6 74 aa0.64□□□□□ -2.31
TRAPPC13-208ENST00000505553 WFDC13Q8IUB5 93 aa0.63□□□□□ -2.31
TRAPPC13-208ENST00000505553 TOMM5Q8N4H5 51 aa0.63□□□□□ -2.31
TRAPPC13-208ENST00000505553 MT4P47944 62 aa0.62□□□□□ -2.31
TRAPPC13-208ENST00000505553 IGIPA6NJ69 53 aa0.6□□□□□ -2.31
TRAPPC13-208ENST00000505553 RPL39P62891 51 aaKnown RBP0.6□□□□□ -2.31
TRAPPC13-208ENST00000505553 H0YAA0 97 aa0.59□□□□□ -2.31
TRAPPC13-208ENST00000505553 MT1BP07438 61 aa0.59□□□□□ -2.31
TRAPPC13-208ENST00000505553 PLNP26678 52 aa0.59□□□□□ -2.31
TRAPPC13-208ENST00000505553 POLR2KP53803 58 aaKnown RBP0.59□□□□□ -2.31
TRAPPC13-208ENST00000505553 H0YGX0 51 aa0.57□□□□□ -2.32
TRAPPC13-208ENST00000505553 KRTAP19-8Q3LI54 63 aa0.57□□□□□ -2.32
TRAPPC13-208ENST00000505553 SMIM2Q9BVW6 85 aa0.57□□□□□ -2.32
TRAPPC13-208ENST00000505553 KRTAP21-1Q3LI58 79 aa0.55□□□□□ -2.32
TRAPPC13-208ENST00000505553 LINC00308Q8TCZ7 52 aa0.55□□□□□ -2.32
TRAPPC13-208ENST00000505553 SPRR2GQ9BYE4 73 aa0.55□□□□□ -2.32
TRAPPC13-208ENST00000505553 SYNE1Q8NF91 8797 aaKnown RBP0.55□□□□□ -2.32
TRAPPC13-208ENST00000505553 SMIM27A0A1W2PRY6 76 aa0.54□□□□□ -2.32
TRAPPC13-208ENST00000505553 MT1XP80297 61 aa0.53□□□□□ -2.32
TRAPPC13-208ENST00000505553 KRTAP20-2Q3LI61 65 aa0.52□□□□□ -2.33
TRAPPC13-208ENST00000505553 IGLV5-48A0A075B6I7 105 aa0.51□□□□□ -2.33
TRAPPC13-208ENST00000505553 S4R3F8 94 aa0.51□□□□□ -2.33
TRAPPC13-208ENST00000505553 MT1GP13640 62 aa0.49□□□□□ -2.33
TRAPPC13-208ENST00000505553 LINC01546A6NGU7 62 aa0.48□□□□□ -2.33
TRAPPC13-208ENST00000505553 MT1EP04732 61 aa0.48□□□□□ -2.33
TRAPPC13-208ENST00000505553 MT1MQ8N339 61 aa0.47□□□□□ -2.33
TRAPPC13-208ENST00000505553 M0QZ58 72 aa0.47□□□□□ -2.33
TRAPPC13-208ENST00000505553 KRTAP19-7Q3SYF9 63 aa0.46□□□□□ -2.34
TRAPPC13-208ENST00000505553 KRTAP19-5Q3LI72 72 aa0.44□□□□□ -2.34
TRAPPC13-208ENST00000505553 MT1LQ93083 61 aa0.44□□□□□ -2.34
TRAPPC13-208ENST00000505553 PRM1P04553 51 aa0.42□□□□□ -2.34
TRAPPC13-208ENST00000505553 MMP24-AS1A0A0U1RRL7 71 aa0.41□□□□□ -2.34
TRAPPC13-208ENST00000505553 PHGR1C9JFL3 82 aa0.41□□□□□ -2.34
TRAPPC13-208ENST00000505553 KRTAP6-2Q3LI66 62 aa0.39□□□□□ -2.35
TRAPPC13-208ENST00000505553 MT1AP04731 61 aa0.38□□□□□ -2.35
TRAPPC13-208ENST00000505553 KRTAP6-1Q3LI64 71 aa0.38□□□□□ -2.35
TRAPPC13-208ENST00000505553 TNP1P09430 55 aa0.33□□□□□ -2.36
Retrieved 77 of 20,778 RNA–protein pairs in 58.2 ms