RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 KRTAP19-5Q3LI72 72 aa0.48□□□□□ -2.33
CKS1BP2-201ENST00000497342 ST20Q9HBF5 79 aa0.48□□□□□ -2.33
CKS1BP2-201ENST00000497342 TRBV7-4A0A0J9YYF1 115 aa0.47□□□□□ -2.33
CKS1BP2-201ENST00000497342 KRTAP6-1Q3LI64 71 aa0.47□□□□□ -2.33
CKS1BP2-201ENST00000497342 NMES1Q9C002 83 aa0.47□□□□□ -2.33
CKS1BP2-201ENST00000497342 TP53AIP1Q9HCN2 124 aa0.47□□□□□ -2.33
CKS1BP2-201ENST00000497342 SPCS1Q9Y6A9 102 aa0.47□□□□□ -2.33
CKS1BP2-201ENST00000497342 WFDC13Q8IUB5 93 aa0.46□□□□□ -2.34
CKS1BP2-201ENST00000497342 MYMXA0A1B0GTQ4 84 aa0.45□□□□□ -2.34
CKS1BP2-201ENST00000497342 KANTRA0A1W2PQU2 76 aa0.45□□□□□ -2.34
CKS1BP2-201ENST00000497342 D6R8Y8 96 aa0.45□□□□□ -2.34
CKS1BP2-201ENST00000497342 SPRR1AP35321 89 aa0.45□□□□□ -2.34
CKS1BP2-201ENST00000497342 MUSTN1Q8IVN3 82 aa0.45□□□□□ -2.34
CKS1BP2-201ENST00000497342 LEPROTL1O95214 131 aa0.44□□□□□ -2.34
CKS1BP2-201ENST00000497342 MT1AP04731 61 aa0.44□□□□□ -2.34
CKS1BP2-201ENST00000497342 IAPPP10997 89 aa0.44□□□□□ -2.34
CKS1BP2-201ENST00000497342 CRIP1P50238 77 aa0.44□□□□□ -2.34
CKS1BP2-201ENST00000497342 BVES-AS1Q5T3Y7 98 aa0.43□□□□□ -2.34
CKS1BP2-201ENST00000497342 DEFB107AQ8IZN7 70 aa0.43□□□□□ -2.34
CKS1BP2-201ENST00000497342 A0A1B0GU69 56 aa0.42□□□□□ -2.34
CKS1BP2-201ENST00000497342 ETDCA0A1B0GVM5 59 aa0.42□□□□□ -2.34
CKS1BP2-201ENST00000497342 K7EQZ3 153 aa0.42□□□□□ -2.34
CKS1BP2-201ENST00000497342 SPRR1BP22528 89 aa0.42□□□□□ -2.34
CKS1BP2-201ENST00000497342 ADIRFQ15847 76 aa0.42□□□□□ -2.34
CKS1BP2-201ENST00000497342 KCNQ1DNQ9H478 68 aa0.42□□□□□ -2.34
CKS1BP2-201ENST00000497342 Q8IZM0 81 aa0.41□□□□□ -2.34
CKS1BP2-201ENST00000497342 A0A1B0GUT8 65 aa0.4□□□□□ -2.35
CKS1BP2-201ENST00000497342 C18orf32Q8TCD1 76 aa0.4□□□□□ -2.35
CKS1BP2-201ENST00000497342 TOMM7Q9P0U1 55 aa0.4□□□□□ -2.35
CKS1BP2-201ENST00000497342 I3L3M4 83 aa0.39□□□□□ -2.35
CKS1BP2-201ENST00000497342 GNGT1P63211 74 aa0.39□□□□□ -2.35
CKS1BP2-201ENST00000497342 PDCD5O14737 125 aa0.38□□□□□ -2.35
CKS1BP2-201ENST00000497342 ATP5EP2Q5VTU8 51 aa0.38□□□□□ -2.35
CKS1BP2-201ENST00000497342 RPL39LQ96EH5 51 aaKnown RBP0.38□□□□□ -2.35
CKS1BP2-201ENST00000497342 MUC16Q8WXI7 14507 aa0.37□□□□□ -2.35
CKS1BP2-201ENST00000497342 H3BUT2 72 aa0.36□□□□□ -2.35
CKS1BP2-201ENST00000497342 NDUFB1O75438 58 aa0.36□□□□□ -2.35
CKS1BP2-201ENST00000497342 COX7BP24311 80 aa0.35□□□□□ -2.35
CKS1BP2-201ENST00000497342 POLR2KP53803 58 aaKnown RBP0.35□□□□□ -2.35
CKS1BP2-201ENST00000497342 Q5BKY6 102 aa0.35□□□□□ -2.35
CKS1BP2-201ENST00000497342 S4R3F8 94 aa0.35□□□□□ -2.35
CKS1BP2-201ENST00000497342 COX8AP10176 69 aa0.33□□□□□ -2.36
CKS1BP2-201ENST00000497342 RPL39P62891 51 aaKnown RBP0.33□□□□□ -2.36
CKS1BP2-201ENST00000497342 C3orf79P0CE67 100 aa0.32□□□□□ -2.36
CKS1BP2-201ENST00000497342 FCER1GP30273 86 aa0.32□□□□□ -2.36
CKS1BP2-201ENST00000497342 IFI27P40305 119 aaPredicted RBP0.32□□□□□ -2.36
CKS1BP2-201ENST00000497342 CDKN2A-AS1Q9UH64 79 aa0.32□□□□□ -2.36
CKS1BP2-201ENST00000497342 UMAD1C9J7I0 102 aa0.31□□□□□ -2.36
CKS1BP2-201ENST00000497342 DEFB105AQ8NG35 78 aa0.31□□□□□ -2.36
CKS1BP2-201ENST00000497342 MRPL34Q9BQ48 92 aaKnown RBP0.31□□□□□ -2.36
CKS1BP2-201ENST00000497342 SMCO4Q9NRQ5 59 aa0.31□□□□□ -2.36
CKS1BP2-201ENST00000497342 SMIM13P0DJ93 91 aa0.3□□□□□ -2.36
CKS1BP2-201ENST00000497342 IGLV5-48A0A075B6I7 105 aa0.29□□□□□ -2.36
CKS1BP2-201ENST00000497342 SMIM2Q9BVW6 85 aa0.28□□□□□ -2.36
CKS1BP2-201ENST00000497342 A0A087WXM4 84 aa0.27□□□□□ -2.37
CKS1BP2-201ENST00000497342 M0QZ58 72 aa0.27□□□□□ -2.37
CKS1BP2-201ENST00000497342 LINC00158P58513 81 aa0.26□□□□□ -2.37
CKS1BP2-201ENST00000497342 NREPQ16612 68 aa0.26□□□□□ -2.37
CKS1BP2-201ENST00000497342 TMEM167BQ9NRX6 74 aa0.26□□□□□ -2.37
CKS1BP2-201ENST00000497342 SMIM31A0A1B0GVY4 71 aa0.25□□□□□ -2.37
CKS1BP2-201ENST00000497342 IGIPA6NJ69 53 aa0.22□□□□□ -2.37
CKS1BP2-201ENST00000497342 LINC01546A6NGU7 62 aa0.2□□□□□ -2.38
CKS1BP2-201ENST00000497342 PRM1P04553 51 aa0.19□□□□□ -2.38
CKS1BP2-201ENST00000497342 ATXN8Q156A1 80 aa0.17□□□□□ -2.38
CKS1BP2-201ENST00000497342 SERF2P84101 59 aa0.16□□□□□ -2.38
CKS1BP2-201ENST00000497342 UBL5Q9BZL1 73 aa0.14□□□□□ -2.39
CKS1BP2-201ENST00000497342 K7EMI3 77 aa0.12□□□□□ -2.39
CKS1BP2-201ENST00000497342 TOMM5Q8N4H5 51 aa0.1□□□□□ -2.39
CKS1BP2-201ENST00000497342 MMP24-AS1A0A0U1RRL7 71 aa0.07□□□□□ -2.4
CKS1BP2-201ENST00000497342 LINC01549A6NIU2 74 aa0.07□□□□□ -2.4
CKS1BP2-201ENST00000497342 TNP1P09430 55 aa0.07□□□□□ -2.4
CKS1BP2-201ENST00000497342 LINC00308Q8TCZ7 52 aa0.07□□□□□ -2.4
CKS1BP2-201ENST00000497342 S100ZQ8WXG8 99 aa0.06□□□□□ -2.4
CKS1BP2-201ENST00000497342 GNG13Q9P2W3 67 aa0.05□□□□□ -2.4
CKS1BP2-201ENST00000497342 SMIM27A0A1W2PRY6 76 aa0.04□□□□□ -2.4
CKS1BP2-201ENST00000497342 PLNP26678 52 aa-0.06□□□□□ -2.42
CKS1BP2-201ENST00000497342 H0YGX0 51 aa-0.1□□□□□ -2.43
Retrieved 77 of 20,778 RNA–protein pairs in 14.1 ms