RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 MT1EP04732 61 aa6.15□□□□□ -1.43
LMNA-216ENST00000496738 SPRR2FQ96RM1 72 aa6.14□□□□□ -1.43
LMNA-216ENST00000496738 MUC12Q9UKN1 5478 aa6.06□□□□□ -1.44
LMNA-216ENST00000496738 KRTAP5-9P26371 169 aa6.01□□□□□ -1.45
LMNA-216ENST00000496738 MT1LQ93083 61 aa6.01□□□□□ -1.45
LMNA-216ENST00000496738 KRTAP6-3Q3LI67 103 aa5.96□□□□□ -1.46
LMNA-216ENST00000496738 KRTAP19-3Q7Z4W3 81 aa5.91□□□□□ -1.46
LMNA-216ENST00000496738 KRTAP4-7Q9BYR0 210 aa5.9□□□□□ -1.47
LMNA-216ENST00000496738 MDN1Q9NU22 5596 aa5.88□□□□□ -1.47
LMNA-216ENST00000496738 LCE3CQ5T5A8 94 aa5.87□□□□□ -1.47
LMNA-216ENST00000496738 KRTAP9-7A8MTY7 169 aa5.87□□□□□ -1.47
LMNA-216ENST00000496738 SPRR2EP22531 72 aa5.84□□□□□ -1.47
LMNA-216ENST00000496738 SPRR2BP35325 72 aa5.84□□□□□ -1.47
LMNA-216ENST00000496738 SPRR2AP35326 72 aa5.84□□□□□ -1.47
LMNA-216ENST00000496738 LCE1AQ5T7P2 110 aa5.84□□□□□ -1.47
LMNA-216ENST00000496738 MT1GP13640 62 aa5.83□□□□□ -1.48
LMNA-216ENST00000496738 LCE5AQ5TCM9 118 aa5.82□□□□□ -1.48
LMNA-216ENST00000496738 MT1MQ8N339 61 aa5.8□□□□□ -1.48
LMNA-216ENST00000496738 KRTAP4-3Q9BYR4 195 aa5.77□□□□□ -1.49
LMNA-216ENST00000496738 KRTAP19-4Q3LI73 84 aa5.73□□□□□ -1.49
LMNA-216ENST00000496738 SPRR2DP22532 72 aa5.63□□□□□ -1.51
LMNA-216ENST00000496738 NEBP20929 6669 aa5.62□□□□□ -1.51
LMNA-216ENST00000496738 DSTQ03001 7570 aaKnown RBP5.61□□□□□ -1.51
LMNA-216ENST00000496738 KRTAP9-6A8MVA2 160 aa5.6□□□□□ -1.51
LMNA-216ENST00000496738 LOC100996750A0A140TA64 210 aa5.54□□□□□ -1.52
LMNA-216ENST00000496738 LCE3BQ5TA77 95 aa5.4□□□□□ -1.55
LMNA-216ENST00000496738 KRTAP2-3P0C7H8 128 aa5.33□□□□□ -1.56
LMNA-216ENST00000496738 KRTAP2-4Q9BYR9 128 aa5.33□□□□□ -1.56
LMNA-216ENST00000496738 KRTAP2-1Q9BYU5 128 aa5.33□□□□□ -1.56
LMNA-216ENST00000496738 KRTAP5-5Q701N2 237 aaPredicted RBP5.21□□□□□ -1.58
LMNA-216ENST00000496738 KRTAP20-1Q3LI63 56 aa5.19□□□□□ -1.58
LMNA-216ENST00000496738 KRTAP2-2Q9BYT5 123 aa5.11□□□□□ -1.59
LMNA-216ENST00000496738 KRTAP6-1Q3LI64 71 aa5.09□□□□□ -1.59
LMNA-216ENST00000496738 MT1AP04731 61 aa5.08□□□□□ -1.6
LMNA-216ENST00000496738 KRTAP5-4Q6L8H1 288 aa4.99□□□□□ -1.61
LMNA-216ENST00000496738 SYNE1Q8NF91 8797 aaKnown RBP4.95□□□□□ -1.62
LMNA-216ENST00000496738 MT4P47944 62 aa4.93□□□□□ -1.62
LMNA-216ENST00000496738 LCE4AQ5TA78 99 aa4.92□□□□□ -1.62
LMNA-216ENST00000496738 KRTAP4-9Q9BYQ8 210 aa4.92□□□□□ -1.62
LMNA-216ENST00000496738 KRTAP12-4P60329 112 aa4.89□□□□□ -1.63
LMNA-216ENST00000496738 KRTAP4-6Q9BYQ5 205 aa4.86□□□□□ -1.63
LMNA-216ENST00000496738 KRTAP9-4Q9BYQ2 154 aa4.84□□□□□ -1.63
LMNA-216ENST00000496738 LCE1DQ5T752 114 aa4.83□□□□□ -1.64
LMNA-216ENST00000496738 HMCN1Q96RW7 5635 aa4.73□□□□□ -1.65
LMNA-216ENST00000496738 KRTAP20-2Q3LI61 65 aa4.72□□□□□ -1.65
LMNA-216ENST00000496738 KRTAP6-2Q3LI66 62 aa4.71□□□□□ -1.66
LMNA-216ENST00000496738 MT3P25713 68 aa4.61□□□□□ -1.67
LMNA-216ENST00000496738 KRTAP5-3Q6L8H2 238 aa4.53□□□□□ -1.68
LMNA-216ENST00000496738 KRTAP5-2Q701N4 177 aa4.52□□□□□ -1.69
LMNA-216ENST00000496738 PRM1P04553 51 aa4.45□□□□□ -1.7
LMNA-216ENST00000496738 LCE1EQ5T753 118 aa4.42□□□□□ -1.7
LMNA-216ENST00000496738 LCE3DQ9BYE3 92 aa4.39□□□□□ -1.71
LMNA-216ENST00000496738 OBSCNQ5VST9 7968 aa4.39□□□□□ -1.71
LMNA-216ENST00000496738 LCE3EQ5T5B0 92 aa4.28□□□□□ -1.72
LMNA-216ENST00000496738 AHNAK2Q8IVF2 5795 aa4.2□□□□□ -1.74
LMNA-216ENST00000496738 KRTAP4-11Q9BYQ6 195 aa4.11□□□□□ -1.75
LMNA-216ENST00000496738 KRTAP5-10Q6L8G5 202 aa4.02□□□□□ -1.77
LMNA-216ENST00000496738 KRTAP5-8O75690 187 aa3.95□□□□□ -1.78
LMNA-216ENST00000496738 LCE1FQ5T754 118 aa3.95□□□□□ -1.78
LMNA-216ENST00000496738 KRTAP5-1Q6L8H4 278 aa3.94□□□□□ -1.78
LMNA-216ENST00000496738 GPR98Q8WXG9 6306 aa3.91□□□□□ -1.78
LMNA-216ENST00000496738 LCE1BQ5T7P3 118 aa3.86□□□□□ -1.79
LMNA-216ENST00000496738 KRTAP4-2Q9BYR5 136 aa3.78□□□□□ -1.81
LMNA-216ENST00000496738 KRTAP5-7Q6L8G8 165 aa3.75□□□□□ -1.81
LMNA-216ENST00000496738 MUC5ACP98088 5654 aa3.74□□□□□ -1.81
LMNA-216ENST00000496738 LCE1CQ5T751 118 aa3.72□□□□□ -1.81
LMNA-216ENST00000496738 KRTAP9-9Q9BYP9 154 aa3.58□□□□□ -1.84
LMNA-216ENST00000496738 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.44□□□□□ -1.86
LMNA-216ENST00000496738 MUC5BQ9HC84 5762 aaPredicted RBP3.43□□□□□ -1.86
LMNA-216ENST00000496738 KRTAP21-2Q3LI59 83 aa3.31□□□□□ -1.88
LMNA-216ENST00000496738 KRTAP5-11Q6L8G4 156 aa3.29□□□□□ -1.88
LMNA-216ENST00000496738 KRTAP4-12Q9BQ66 201 aa3.24□□□□□ -1.89
LMNA-216ENST00000496738 AHNAKQ09666 5890 aaKnown RBP3.21□□□□□ -1.9
LMNA-216ENST00000496738 KRTAP4-4Q9BYR3 166 aa3.04□□□□□ -1.92
LMNA-216ENST00000496738 MUC19Q7Z5P9 8384 aa3.03□□□□□ -1.92
LMNA-216ENST00000496738 KRTAP21-1Q3LI58 79 aa2.95□□□□□ -1.94
LMNA-216ENST00000496738 PHGR1C9JFL3 82 aa2.84□□□□□ -1.95
LMNA-216ENST00000496738 MUC16Q8WXI7 14507 aa1.8□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 70.4 ms