RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 KRTAP12-3P60328 96 aa4.11□□□□□ -1.75
PKP4-215ENST00000494945 KRTAP19-5Q3LI72 72 aa4.11□□□□□ -1.75
PKP4-215ENST00000494945 KRTAP19-7Q3SYF9 63 aa4.09□□□□□ -1.75
PKP4-215ENST00000494945 LCE1DQ5T752 114 aa4.09□□□□□ -1.75
PKP4-215ENST00000494945 A0A0A0MQY5 61 aa4.06□□□□□ -1.76
PKP4-215ENST00000494945 KRTAP5-3Q6L8H2 238 aa4.05□□□□□ -1.76
PKP4-215ENST00000494945 KRTAP4-9Q9BYQ8 210 aa4.05□□□□□ -1.76
PKP4-215ENST00000494945 MT1EP04732 61 aa4.03□□□□□ -1.76
PKP4-215ENST00000494945 KRTAP5-9P26371 169 aa4.02□□□□□ -1.77
PKP4-215ENST00000494945 SPRR2FQ96RM1 72 aa4.02□□□□□ -1.77
PKP4-215ENST00000494945 KRTAP15-1Q3LI76 137 aa4.01□□□□□ -1.77
PKP4-215ENST00000494945 KRTAP6-3Q3LI67 103 aa4□□□□□ -1.77
PKP4-215ENST00000494945 KRTAP19-4Q3LI73 84 aa3.94□□□□□ -1.78
PKP4-215ENST00000494945 MT1LQ93083 61 aa3.93□□□□□ -1.78
PKP4-215ENST00000494945 KRTAP19-3Q7Z4W3 81 aa3.9□□□□□ -1.79
PKP4-215ENST00000494945 MT1GP13640 62 aa3.87□□□□□ -1.79
PKP4-215ENST00000494945 NEBP20929 6669 aa3.86□□□□□ -1.79
PKP4-215ENST00000494945 MUC12Q9UKN1 5478 aa3.85□□□□□ -1.79
PKP4-215ENST00000494945 KRTAP20-1Q3LI63 56 aa3.85□□□□□ -1.79
PKP4-215ENST00000494945 LCE1AQ5T7P2 110 aa3.85□□□□□ -1.79
PKP4-215ENST00000494945 SPRR2EP22531 72 aa3.84□□□□□ -1.79
PKP4-215ENST00000494945 SPRR2BP35325 72 aa3.84□□□□□ -1.79
PKP4-215ENST00000494945 SPRR2AP35326 72 aa3.84□□□□□ -1.79
PKP4-215ENST00000494945 LCE3CQ5T5A8 94 aa3.84□□□□□ -1.79
PKP4-215ENST00000494945 LCE5AQ5TCM9 118 aa3.84□□□□□ -1.79
PKP4-215ENST00000494945 KRTAP4-11Q9BYQ6 195 aa3.83□□□□□ -1.8
PKP4-215ENST00000494945 MT1MQ8N339 61 aa3.8□□□□□ -1.8
PKP4-215ENST00000494945 SPRR5A0A1B0GTR4 108 aa3.76□□□□□ -1.81
PKP4-215ENST00000494945 MDN1Q9NU22 5596 aa3.72□□□□□ -1.81
PKP4-215ENST00000494945 SPRR2DP22532 72 aa3.7□□□□□ -1.82
PKP4-215ENST00000494945 KRTAP4-3Q9BYR4 195 aa3.68□□□□□ -1.82
PKP4-215ENST00000494945 KRTAP2-3P0C7H8 128 aa3.63□□□□□ -1.83
PKP4-215ENST00000494945 KRTAP2-4Q9BYR9 128 aa3.63□□□□□ -1.83
PKP4-215ENST00000494945 KRTAP9-6A8MVA2 160 aa3.6□□□□□ -1.83
PKP4-215ENST00000494945 LUZP6Q538Z0 58 aa3.59□□□□□ -1.83
PKP4-215ENST00000494945 DSTQ03001 7570 aaKnown RBP3.56□□□□□ -1.84
PKP4-215ENST00000494945 KRTAP2-2Q9BYT5 123 aa3.49□□□□□ -1.85
PKP4-215ENST00000494945 KRTAP2-1Q9BYU5 128 aa3.49□□□□□ -1.85
PKP4-215ENST00000494945 KRTAP5-5Q701N2 237 aaPredicted RBP3.44□□□□□ -1.86
PKP4-215ENST00000494945 GPR98Q8WXG9 6306 aa3.42□□□□□ -1.86
PKP4-215ENST00000494945 NDUFAF8A1L188 74 aa3.39□□□□□ -1.87
PKP4-215ENST00000494945 LCE4AQ5TA78 99 aa3.39□□□□□ -1.87
PKP4-215ENST00000494945 MT1AP04731 61 aa3.36□□□□□ -1.87
PKP4-215ENST00000494945 KRTAP5-4Q6L8H1 288 aa3.34□□□□□ -1.87
PKP4-215ENST00000494945 KRTAP6-1Q3LI64 71 aa3.3□□□□□ -1.88
PKP4-215ENST00000494945 KRTAP12-4P60329 112 aa3.23□□□□□ -1.89
PKP4-215ENST00000494945 MT4P47944 62 aa3.19□□□□□ -1.9
PKP4-215ENST00000494945 SYNE1Q8NF91 8797 aaKnown RBP3.19□□□□□ -1.9
PKP4-215ENST00000494945 KRTAP20-2Q3LI61 65 aa3.11□□□□□ -1.91
PKP4-215ENST00000494945 KRTAP6-2Q3LI66 62 aa3.06□□□□□ -1.92
PKP4-215ENST00000494945 MT3P25713 68 aa3.05□□□□□ -1.92
PKP4-215ENST00000494945 HMCN1Q96RW7 5635 aa3.05□□□□□ -1.92
PKP4-215ENST00000494945 KRTAP5-2Q701N4 177 aa3.02□□□□□ -1.93
PKP4-215ENST00000494945 AHNAK2Q8IVF2 5795 aa3.01□□□□□ -1.93
PKP4-215ENST00000494945 KRTAP5-10Q6L8G5 202 aa2.99□□□□□ -1.93
PKP4-215ENST00000494945 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.93□□□□□ -1.94
PKP4-215ENST00000494945 KRTAP5-7Q6L8G8 165 aa2.91□□□□□ -1.94
PKP4-215ENST00000494945 LCE3DQ9BYE3 92 aa2.87□□□□□ -1.95
PKP4-215ENST00000494945 INE1O15225 51 aa2.85□□□□□ -1.95
PKP4-215ENST00000494945 LCE3EQ5T5B0 92 aa2.78□□□□□ -1.96
PKP4-215ENST00000494945 OBSCNQ5VST9 7968 aa2.78□□□□□ -1.97
PKP4-215ENST00000494945 LCE1EQ5T753 118 aa2.69□□□□□ -1.98
PKP4-215ENST00000494945 KRTAP5-8O75690 187 aa2.62□□□□□ -1.99
PKP4-215ENST00000494945 KRTAP5-1Q6L8H4 278 aa2.61□□□□□ -1.99
PKP4-215ENST00000494945 KRTAP5-11Q6L8G4 156 aa2.58□□□□□ -2
PKP4-215ENST00000494945 AHNAKQ09666 5890 aaKnown RBP2.57□□□□□ -2
PKP4-215ENST00000494945 MUC5ACP98088 5654 aa2.55□□□□□ -2
PKP4-215ENST00000494945 LCE1FQ5T754 118 aa2.54□□□□□ -2
PKP4-215ENST00000494945 MUC5BQ9HC84 5762 aaPredicted RBP2.49□□□□□ -2.01
PKP4-215ENST00000494945 LCE1CQ5T751 118 aa2.49□□□□□ -2.01
PKP4-215ENST00000494945 LCE1BQ5T7P3 118 aa2.49□□□□□ -2.01
PKP4-215ENST00000494945 KRTAP4-4Q9BYR3 166 aa2.42□□□□□ -2.02
PKP4-215ENST00000494945 PRM1P04553 51 aa2.37□□□□□ -2.03
PKP4-215ENST00000494945 KRTAP21-2Q3LI59 83 aa2.17□□□□□ -2.06
PKP4-215ENST00000494945 PHGR1C9JFL3 82 aa1.89□□□□□ -2.11
PKP4-215ENST00000494945 MUC19Q7Z5P9 8384 aa1.65□□□□□ -2.15
PKP4-215ENST00000494945 KRTAP21-1Q3LI58 79 aa1.44□□□□□ -2.18
PKP4-215ENST00000494945 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 211.8 ms