RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 KRTAP2-3P0C7H8 128 aa4.89□□□□□ -1.63
PDLIM1-205ENST00000493949 KRTAP2-4Q9BYR9 128 aa4.89□□□□□ -1.63
PDLIM1-205ENST00000493949 KRTAP5-9P26371 169 aa4.86□□□□□ -1.63
PDLIM1-205ENST00000493949 KMT2DO14686 5537 aa4.85□□□□□ -1.63
PDLIM1-205ENST00000493949 PLAC4Q8WY50 150 aa4.82□□□□□ -1.64
PDLIM1-205ENST00000493949 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.8□□□□□ -1.64
PDLIM1-205ENST00000493949 LUZP6Q538Z0 58 aa4.74□□□□□ -1.65
PDLIM1-205ENST00000493949 KRTAP2-2Q9BYT5 123 aa4.7□□□□□ -1.66
PDLIM1-205ENST00000493949 KRTAP2-1Q9BYU5 128 aa4.7□□□□□ -1.66
PDLIM1-205ENST00000493949 KRTAP10-7P60409 375 aaPredicted RBP4.69□□□□□ -1.66
PDLIM1-205ENST00000493949 CAMK2N1Q7Z7J9 78 aa4.67□□□□□ -1.66
PDLIM1-205ENST00000493949 A0A0A0MQY5 61 aa4.65□□□□□ -1.67
PDLIM1-205ENST00000493949 KRTAP5-11Q6L8G4 156 aa4.65□□□□□ -1.67
PDLIM1-205ENST00000493949 GPR98Q8WXG9 6306 aa4.64□□□□□ -1.67
PDLIM1-205ENST00000493949 TNP1P09430 55 aa4.63□□□□□ -1.67
PDLIM1-205ENST00000493949 SPRR5A0A1B0GTR4 108 aa4.58□□□□□ -1.68
PDLIM1-205ENST00000493949 SPRR2EP22531 72 aa4.58□□□□□ -1.68
PDLIM1-205ENST00000493949 SPRR2BP35325 72 aa4.58□□□□□ -1.68
PDLIM1-205ENST00000493949 SPRR2AP35326 72 aa4.58□□□□□ -1.68
PDLIM1-205ENST00000493949 KRTAP10-5P60370 271 aa4.58□□□□□ -1.68
PDLIM1-205ENST00000493949 LCE1AQ5T7P2 110 aa4.57□□□□□ -1.68
PDLIM1-205ENST00000493949 MT1BP07438 61 aa4.56□□□□□ -1.68
PDLIM1-205ENST00000493949 SPRR2FQ96RM1 72 aa4.51□□□□□ -1.69
PDLIM1-205ENST00000493949 KRTAP19-8Q3LI54 63 aa4.48□□□□□ -1.69
PDLIM1-205ENST00000493949 SPRR2DP22532 72 aa4.43□□□□□ -1.7
PDLIM1-205ENST00000493949 SPRR2GQ9BYE4 73 aa4.42□□□□□ -1.7
PDLIM1-205ENST00000493949 LCE1EQ5T753 118 aa4.35□□□□□ -1.71
PDLIM1-205ENST00000493949 KRTAP8-1Q8IUC2 63 aa4.31□□□□□ -1.72
PDLIM1-205ENST00000493949 DSTQ03001 7570 aaKnown RBP4.28□□□□□ -1.72
PDLIM1-205ENST00000493949 INE1O15225 51 aa4.27□□□□□ -1.73
PDLIM1-205ENST00000493949 PRO2289Q9P1D8 64 aa4.24□□□□□ -1.73
PDLIM1-205ENST00000493949 LCE3AQ5TA76 89 aa4.19□□□□□ -1.74
PDLIM1-205ENST00000493949 MT1XP80297 61 aa4.15□□□□□ -1.75
PDLIM1-205ENST00000493949 KRTAP5-1Q6L8H4 278 aa4.15□□□□□ -1.75
PDLIM1-205ENST00000493949 HMCN1Q96RW7 5635 aa4.1□□□□□ -1.75
PDLIM1-205ENST00000493949 KRTAP5-10Q6L8G5 202 aa4.1□□□□□ -1.75
PDLIM1-205ENST00000493949 AHNAK2Q8IVF2 5795 aa4.09□□□□□ -1.76
PDLIM1-205ENST00000493949 KRTAP10-12P60413 245 aa4.07□□□□□ -1.76
PDLIM1-205ENST00000493949 KRTAP12-3P60328 96 aa4.06□□□□□ -1.76
PDLIM1-205ENST00000493949 KRTAP5-7Q6L8G8 165 aa4.03□□□□□ -1.76
PDLIM1-205ENST00000493949 KRTAP5-4Q6L8H1 288 aa4.03□□□□□ -1.76
PDLIM1-205ENST00000493949 KRTAP4-4Q9BYR3 166 aa4□□□□□ -1.77
PDLIM1-205ENST00000493949 MT4P47944 62 aa3.91□□□□□ -1.78
PDLIM1-205ENST00000493949 MT3P25713 68 aa3.84□□□□□ -1.79
PDLIM1-205ENST00000493949 LCE3CQ5T5A8 94 aa3.84□□□□□ -1.79
PDLIM1-205ENST00000493949 KRTAP19-3Q7Z4W3 81 aa3.79□□□□□ -1.8
PDLIM1-205ENST00000493949 KRTAP9-6A8MVA2 160 aa3.75□□□□□ -1.81
PDLIM1-205ENST00000493949 KRTAP19-5Q3LI72 72 aa3.74□□□□□ -1.81
PDLIM1-205ENST00000493949 KRTAP19-7Q3SYF9 63 aa3.72□□□□□ -1.81
PDLIM1-205ENST00000493949 MT1EP04732 61 aa3.7□□□□□ -1.82
PDLIM1-205ENST00000493949 MT1GP13640 62 aa3.64□□□□□ -1.83
PDLIM1-205ENST00000493949 OBSCNQ5VST9 7968 aa3.63□□□□□ -1.83
PDLIM1-205ENST00000493949 LCE1FQ5T754 118 aa3.59□□□□□ -1.83
PDLIM1-205ENST00000493949 KRTAP4-3Q9BYR4 195 aa3.58□□□□□ -1.84
PDLIM1-205ENST00000493949 KRTAP20-2Q3LI61 65 aa3.57□□□□□ -1.84
PDLIM1-205ENST00000493949 MT1MQ8N339 61 aa3.57□□□□□ -1.84
PDLIM1-205ENST00000493949 AHNAKQ09666 5890 aaKnown RBP3.57□□□□□ -1.84
PDLIM1-205ENST00000493949 MT1LQ93083 61 aa3.52□□□□□ -1.85
PDLIM1-205ENST00000493949 MUC5ACP98088 5654 aa3.47□□□□□ -1.85
PDLIM1-205ENST00000493949 MUC5BQ9HC84 5762 aaPredicted RBP3.47□□□□□ -1.85
PDLIM1-205ENST00000493949 KRTAP5-2Q701N4 177 aa3.38□□□□□ -1.87
PDLIM1-205ENST00000493949 KRTAP12-4P60329 112 aa3.37□□□□□ -1.87
PDLIM1-205ENST00000493949 KRTAP5-5Q701N2 237 aaPredicted RBP3.36□□□□□ -1.87
PDLIM1-205ENST00000493949 KRTAP5-8O75690 187 aa3.34□□□□□ -1.87
PDLIM1-205ENST00000493949 SYNE1Q8NF91 8797 aaKnown RBP3.31□□□□□ -1.88
PDLIM1-205ENST00000493949 MT1AP04731 61 aa3.2□□□□□ -1.9
PDLIM1-205ENST00000493949 LCE3EQ5T5B0 92 aa3.11□□□□□ -1.91
PDLIM1-205ENST00000493949 LCE3DQ9BYE3 92 aa2.99□□□□□ -1.93
PDLIM1-205ENST00000493949 KRTAP6-1Q3LI64 71 aa2.98□□□□□ -1.93
PDLIM1-205ENST00000493949 KRTAP6-2Q3LI66 62 aa2.91□□□□□ -1.94
PDLIM1-205ENST00000493949 PRM1P04553 51 aa2.82□□□□□ -1.96
PDLIM1-205ENST00000493949 LCE1CQ5T751 118 aa2.81□□□□□ -1.96
PDLIM1-205ENST00000493949 LCE1BQ5T7P3 118 aa2.81□□□□□ -1.96
PDLIM1-205ENST00000493949 MUC19Q7Z5P9 8384 aa2.41□□□□□ -2.02
PDLIM1-205ENST00000493949 PHGR1C9JFL3 82 aa2.38□□□□□ -2.03
PDLIM1-205ENST00000493949 KRTAP21-2Q3LI59 83 aa2.03□□□□□ -2.08
PDLIM1-205ENST00000493949 KRTAP21-1Q3LI58 79 aa1.9□□□□□ -2.11
PDLIM1-205ENST00000493949 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 118.4 ms