RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 LINC00846Q9NV44 126 aa1.17□□□□□ -2.22
DEPDC1-204ENST00000489862 RPL37P61927 97 aaKnown RBP1.16□□□□□ -2.22
DEPDC1-204ENST00000489862 ATP5EP2Q5VTU8 51 aa1.16□□□□□ -2.22
DEPDC1-204ENST00000489862 UBL5Q9BZL1 73 aa1.16□□□□□ -2.22
DEPDC1-204ENST00000489862 NREPQ16612 68 aa1.15□□□□□ -2.23
DEPDC1-204ENST00000489862 KRTAP19-2Q3LHN2 52 aa1.15□□□□□ -2.23
DEPDC1-204ENST00000489862 SSBP3-AS1Q7Z2R9 100 aa1.15□□□□□ -2.23
DEPDC1-204ENST00000489862 USH2AO75445 5202 aa1.13□□□□□ -2.23
DEPDC1-204ENST00000489862 SSPOA2VEC9 5147 aa1.13□□□□□ -2.23
DEPDC1-204ENST00000489862 SPINK1P00995 79 aa1.13□□□□□ -2.23
DEPDC1-204ENST00000489862 AHNAK2Q8IVF2 5795 aa1.13□□□□□ -2.23
DEPDC1-204ENST00000489862 RPS29P62273 56 aaKnown RBP1.12□□□□□ -2.23
DEPDC1-204ENST00000489862 C9orf92A6NGG3 77 aa1.11□□□□□ -2.23
DEPDC1-204ENST00000489862 K7EQZ3 153 aa1.11□□□□□ -2.23
DEPDC1-204ENST00000489862 NDUFB1O75438 58 aa1.11□□□□□ -2.23
DEPDC1-204ENST00000489862 SPATA8Q6RVD6 105 aa1.11□□□□□ -2.23
DEPDC1-204ENST00000489862 SYNE2Q8WXH0 6885 aaKnown RBP1.1□□□□□ -2.23
DEPDC1-204ENST00000489862 H0Y9P7 68 aa1.09□□□□□ -2.23
DEPDC1-204ENST00000489862 WFDC13Q8IUB5 93 aa1.09□□□□□ -2.23
DEPDC1-204ENST00000489862 MMP24-AS1A0A0U1RRL7 71 aa1.08□□□□□ -2.24
DEPDC1-204ENST00000489862 MT1HP80294 61 aa1.08□□□□□ -2.24
DEPDC1-204ENST00000489862 C10orf95Q9H7T3 257 aa1.08□□□□□ -2.24
DEPDC1-204ENST00000489862 MRPL34Q9BQ48 92 aaKnown RBP1.07□□□□□ -2.24
DEPDC1-204ENST00000489862 TP53AIP1Q9HCN2 124 aa1.07□□□□□ -2.24
DEPDC1-204ENST00000489862 MACF1Q9UPN3 7388 aaKnown RBP1.06□□□□□ -2.24
DEPDC1-204ENST00000489862 CRIPTQ9P021 101 aa1.04□□□□□ -2.24
DEPDC1-204ENST00000489862 A0A1B0GU69 56 aa1.04□□□□□ -2.24
DEPDC1-204ENST00000489862 AHNAKQ09666 5890 aaKnown RBP1.03□□□□□ -2.24
DEPDC1-204ENST00000489862 MT2AP02795 61 aa1.03□□□□□ -2.24
DEPDC1-204ENST00000489862 MT1FP04733 61 aa1.02□□□□□ -2.25
DEPDC1-204ENST00000489862 A0A0D9SG42 100 aa1.01□□□□□ -2.25
DEPDC1-204ENST00000489862 NEBP20929 6669 aa1.01□□□□□ -2.25
DEPDC1-204ENST00000489862 COX6B2Q6YFQ2 88 aa0.99□□□□□ -2.25
DEPDC1-204ENST00000489862 M0R2T5 61 aa0.98□□□□□ -2.25
DEPDC1-204ENST00000489862 KMT2DO14686 5537 aa0.97□□□□□ -2.25
DEPDC1-204ENST00000489862 MUC12Q9UKN1 5478 aa0.97□□□□□ -2.25
DEPDC1-204ENST00000489862 MDN1Q9NU22 5596 aa0.97□□□□□ -2.25
DEPDC1-204ENST00000489862 H1FX-AS1Q4G0G2 97 aa0.97□□□□□ -2.25
DEPDC1-204ENST00000489862 MT1BP07438 61 aa0.95□□□□□ -2.26
DEPDC1-204ENST00000489862 GPR98Q8WXG9 6306 aa0.95□□□□□ -2.26
DEPDC1-204ENST00000489862 KRTAP19-6Q3LI70 58 aa0.94□□□□□ -2.26
DEPDC1-204ENST00000489862 S4R3F8 94 aa0.94□□□□□ -2.26
DEPDC1-204ENST00000489862 KRTAP19-8Q3LI54 63 aa0.93□□□□□ -2.26
DEPDC1-204ENST00000489862 SPRR2GQ9BYE4 73 aa0.93□□□□□ -2.26
DEPDC1-204ENST00000489862 H0YAA0 97 aa0.91□□□□□ -2.26
DEPDC1-204ENST00000489862 M0QZ58 72 aa0.89□□□□□ -2.27
DEPDC1-204ENST00000489862 MT1XP80297 61 aa0.89□□□□□ -2.27
DEPDC1-204ENST00000489862 DSTQ03001 7570 aaKnown RBP0.88□□□□□ -2.27
DEPDC1-204ENST00000489862 KRTAP5-10Q6L8G5 202 aa0.85□□□□□ -2.27
DEPDC1-204ENST00000489862 KRTAP19-7Q3SYF9 63 aa0.81□□□□□ -2.28
DEPDC1-204ENST00000489862 SPRR2FQ96RM1 72 aa0.8□□□□□ -2.28
DEPDC1-204ENST00000489862 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
DEPDC1-204ENST00000489862 TNP1P09430 55 aa0.79□□□□□ -2.28
DEPDC1-204ENST00000489862 KRTAP8-1Q8IUC2 63 aa0.79□□□□□ -2.28
DEPDC1-204ENST00000489862 MT1EP04732 61 aa0.78□□□□□ -2.29
DEPDC1-204ENST00000489862 SPRR2EP22531 72 aa0.78□□□□□ -2.29
DEPDC1-204ENST00000489862 SPRR2BP35325 72 aa0.78□□□□□ -2.29
DEPDC1-204ENST00000489862 SPRR2AP35326 72 aa0.78□□□□□ -2.29
DEPDC1-204ENST00000489862 KRTAP2-3P0C7H8 128 aa0.77□□□□□ -2.29
DEPDC1-204ENST00000489862 KRTAP20-1Q3LI63 56 aa0.77□□□□□ -2.29
DEPDC1-204ENST00000489862 KRTAP19-5Q3LI72 72 aa0.77□□□□□ -2.29
DEPDC1-204ENST00000489862 KRTAP2-4Q9BYR9 128 aa0.77□□□□□ -2.29
DEPDC1-204ENST00000489862 KRTAP2-1Q9BYU5 128 aa0.77□□□□□ -2.29
DEPDC1-204ENST00000489862 MUC5ACP98088 5654 aa0.77□□□□□ -2.29
DEPDC1-204ENST00000489862 KRTAP19-3Q7Z4W3 81 aa0.75□□□□□ -2.29
DEPDC1-204ENST00000489862 SPRR2DP22532 72 aa0.75□□□□□ -2.29
DEPDC1-204ENST00000489862 MT1LQ93083 61 aa0.75□□□□□ -2.29
DEPDC1-204ENST00000489862 SYNE1Q8NF91 8797 aaKnown RBP0.74□□□□□ -2.29
DEPDC1-204ENST00000489862 MT1MQ8N339 61 aa0.74□□□□□ -2.29
DEPDC1-204ENST00000489862 MT1GP13640 62 aa0.73□□□□□ -2.29
DEPDC1-204ENST00000489862 MT4P47944 62 aa0.67□□□□□ -2.3
DEPDC1-204ENST00000489862 KRTAP20-2Q3LI61 65 aa0.64□□□□□ -2.31
DEPDC1-204ENST00000489862 KRTAP6-1Q3LI64 71 aa0.64□□□□□ -2.31
DEPDC1-204ENST00000489862 MT1AP04731 61 aa0.62□□□□□ -2.31
DEPDC1-204ENST00000489862 KRTAP6-2Q3LI66 62 aa0.6□□□□□ -2.31
DEPDC1-204ENST00000489862 PRM1P04553 51 aa0.55□□□□□ -2.32
DEPDC1-204ENST00000489862 KRTAP21-1Q3LI58 79 aa0.49□□□□□ -2.33
DEPDC1-204ENST00000489862 PHGR1C9JFL3 82 aa0.38□□□□□ -2.35
Retrieved 78 of 20,778 RNA–protein pairs in 14.7 ms