RNA–Protein interactions for RNA: ENST00000488923.1

HDLBP-243, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-243ENST00000488923 C10orf95Q9H7T3 257 aa2.9□□□□□ -1.95
HDLBP-243ENST00000488923 PRO2289Q9P1D8 64 aa2.9□□□□□ -1.95
HDLBP-243ENST00000488923 RNF213Q63HN8 5207 aa2.89□□□□□ -1.95
HDLBP-243ENST00000488923 TNP1P09430 55 aa2.88□□□□□ -1.95
HDLBP-243ENST00000488923 KRTAP10-10P60014 251 aa2.88□□□□□ -1.95
HDLBP-243ENST00000488923 KRTAP10-12P60413 245 aa2.88□□□□□ -1.95
HDLBP-243ENST00000488923 MUC2Q02817 5179 aa2.87□□□□□ -1.95
HDLBP-243ENST00000488923 MT2AP02795 61 aa2.87□□□□□ -1.95
HDLBP-243ENST00000488923 KRTAP5-2Q701N4 177 aa2.86□□□□□ -1.95
HDLBP-243ENST00000488923 MT1FP04733 61 aa2.83□□□□□ -1.96
HDLBP-243ENST00000488923 KRTAP19-8Q3LI54 63 aa2.83□□□□□ -1.96
HDLBP-243ENST00000488923 LCE1FQ5T754 118 aa2.81□□□□□ -1.96
HDLBP-243ENST00000488923 FAT4Q6V0I7 4981 aa2.8□□□□□ -1.96
HDLBP-243ENST00000488923 MT1BP07438 61 aa2.74□□□□□ -1.97
HDLBP-243ENST00000488923 INE1O15225 51 aa2.68□□□□□ -1.98
HDLBP-243ENST00000488923 MT1XP80297 61 aa2.68□□□□□ -1.98
HDLBP-243ENST00000488923 LCE3CQ5T5A8 94 aa2.67□□□□□ -1.98
HDLBP-243ENST00000488923 LCE3AQ5TA76 89 aa2.64□□□□□ -1.99
HDLBP-243ENST00000488923 KRTAP8-1Q8IUC2 63 aa2.64□□□□□ -1.99
HDLBP-243ENST00000488923 SPRR5A0A1B0GTR4 108 aa2.58□□□□□ -2
HDLBP-243ENST00000488923 KRTAP12-3P60328 96 aa2.57□□□□□ -2
HDLBP-243ENST00000488923 FSIP2Q5CZC0 6907 aa2.51□□□□□ -2.01
HDLBP-243ENST00000488923 CRCT1Q9UGL9 99 aa2.49□□□□□ -2.01
HDLBP-243ENST00000488923 KRTAP19-6Q3LI70 58 aa2.48□□□□□ -2.01
HDLBP-243ENST00000488923 KRTAP5-8O75690 187 aa2.46□□□□□ -2.02
HDLBP-243ENST00000488923 USH2AO75445 5202 aa2.46□□□□□ -2.02
HDLBP-243ENST00000488923 KRTAP19-5Q3LI72 72 aa2.45□□□□□ -2.02
HDLBP-243ENST00000488923 LCE3EQ5T5B0 92 aa2.43□□□□□ -2.02
HDLBP-243ENST00000488923 KRTAP5-5Q701N2 237 aaPredicted RBP2.43□□□□□ -2.02
HDLBP-243ENST00000488923 KRTAP19-7Q3SYF9 63 aa2.38□□□□□ -2.03
HDLBP-243ENST00000488923 SSPOA2VEC9 5147 aa2.38□□□□□ -2.03
HDLBP-243ENST00000488923 LCE1CQ5T751 118 aa2.36□□□□□ -2.03
HDLBP-243ENST00000488923 LCE1BQ5T7P3 118 aa2.36□□□□□ -2.03
HDLBP-243ENST00000488923 MT1EP04732 61 aa2.35□□□□□ -2.03
HDLBP-243ENST00000488923 MT1LQ93083 61 aa2.32□□□□□ -2.04
HDLBP-243ENST00000488923 MT1GP13640 62 aa2.27□□□□□ -2.05
HDLBP-243ENST00000488923 KMT2DO14686 5537 aa2.25□□□□□ -2.05
HDLBP-243ENST00000488923 KRTAP19-3Q7Z4W3 81 aa2.25□□□□□ -2.05
HDLBP-243ENST00000488923 FCGBPQ9Y6R7 5405 aaPredicted RBP2.24□□□□□ -2.05
HDLBP-243ENST00000488923 MT1MQ8N339 61 aa2.21□□□□□ -2.06
HDLBP-243ENST00000488923 SPRR2FQ96RM1 72 aa2.2□□□□□ -2.06
HDLBP-243ENST00000488923 MACF1Q9UPN3 7388 aaKnown RBP2.19□□□□□ -2.06
HDLBP-243ENST00000488923 SYNE2Q8WXH0 6885 aaKnown RBP2.18□□□□□ -2.06
HDLBP-243ENST00000488923 KRTAP2-3P0C7H8 128 aa2.17□□□□□ -2.06
HDLBP-243ENST00000488923 KRTAP2-4Q9BYR9 128 aa2.17□□□□□ -2.06
HDLBP-243ENST00000488923 KRTAP2-1Q9BYU5 128 aa2.17□□□□□ -2.06
HDLBP-243ENST00000488923 NEBP20929 6669 aa2.09□□□□□ -2.07
HDLBP-243ENST00000488923 MUC12Q9UKN1 5478 aa2.08□□□□□ -2.08
HDLBP-243ENST00000488923 KRTAP6-3Q3LI67 103 aa2.07□□□□□ -2.08
HDLBP-243ENST00000488923 SPRR2EP22531 72 aa2.06□□□□□ -2.08
HDLBP-243ENST00000488923 SPRR2BP35325 72 aa2.06□□□□□ -2.08
HDLBP-243ENST00000488923 SPRR2AP35326 72 aa2.06□□□□□ -2.08
HDLBP-243ENST00000488923 KRTAP20-1Q3LI63 56 aa2.06□□□□□ -2.08
HDLBP-243ENST00000488923 MT1AP04731 61 aa2□□□□□ -2.09
HDLBP-243ENST00000488923 SPRR2DP22532 72 aa1.99□□□□□ -2.09
HDLBP-243ENST00000488923 MUC19Q7Z5P9 8384 aa1.99□□□□□ -2.09
HDLBP-243ENST00000488923 MDN1Q9NU22 5596 aa1.98□□□□□ -2.09
HDLBP-243ENST00000488923 GPR98Q8WXG9 6306 aa1.95□□□□□ -2.1
HDLBP-243ENST00000488923 DSTQ03001 7570 aaKnown RBP1.94□□□□□ -2.1
HDLBP-243ENST00000488923 KRTAP6-1Q3LI64 71 aa1.93□□□□□ -2.1
HDLBP-243ENST00000488923 KRTAP5-7Q6L8G8 165 aa1.89□□□□□ -2.11
HDLBP-243ENST00000488923 KRTAP12-4P60329 112 aa1.88□□□□□ -2.11
HDLBP-243ENST00000488923 LCE3DQ9BYE3 92 aa1.84□□□□□ -2.11
HDLBP-243ENST00000488923 SYNE1Q8NF91 8797 aaKnown RBP1.82□□□□□ -2.12
HDLBP-243ENST00000488923 KRTAP6-2Q3LI66 62 aa1.76□□□□□ -2.13
HDLBP-243ENST00000488923 KRTAP21-2Q3LI59 83 aa1.69□□□□□ -2.14
HDLBP-243ENST00000488923 KRTAP20-2Q3LI61 65 aa1.69□□□□□ -2.14
HDLBP-243ENST00000488923 MT4P47944 62 aa1.68□□□□□ -2.14
HDLBP-243ENST00000488923 KRTAP5-10Q6L8G5 202 aa1.68□□□□□ -2.14
HDLBP-243ENST00000488923 AHNAK2Q8IVF2 5795 aa1.67□□□□□ -2.14
HDLBP-243ENST00000488923 PRM1P04553 51 aa1.61□□□□□ -2.15
HDLBP-243ENST00000488923 HMCN1Q96RW7 5635 aa1.59□□□□□ -2.15
HDLBP-243ENST00000488923 AHNAKQ09666 5890 aaKnown RBP1.45□□□□□ -2.18
HDLBP-243ENST00000488923 MUC5ACP98088 5654 aa1.42□□□□□ -2.18
HDLBP-243ENST00000488923 MUC5BQ9HC84 5762 aaPredicted RBP1.39□□□□□ -2.19
HDLBP-243ENST00000488923 PHGR1C9JFL3 82 aa1.07□□□□□ -2.24
HDLBP-243ENST00000488923 KRTAP21-1Q3LI58 79 aa1.07□□□□□ -2.24
HDLBP-243ENST00000488923 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 496.5 ms