RNA–Protein interactions for RNA: ENST00000486556.1

TRADD-202, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2 BASIC

Gene TRADD, Length 1,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-202ENST00000486556 LCE3CQ5T5A8 94 aa7.68□□□□□ -1.18
TRADD-202ENST00000486556 KRTAP6-3Q3LI67 103 aa7.68□□□□□ -1.18
TRADD-202ENST00000486556 MT1LQ93083 61 aa7.68□□□□□ -1.18
TRADD-202ENST00000486556 SPRR2FQ96RM1 72 aa7.57□□□□□ -1.2
TRADD-202ENST00000486556 KRTAP19-3Q7Z4W3 81 aa7.51□□□□□ -1.21
TRADD-202ENST00000486556 MT1GP13640 62 aa7.48□□□□□ -1.21
TRADD-202ENST00000486556 KRTAP5-9P26371 169 aa7.48□□□□□ -1.21
TRADD-202ENST00000486556 MUC12Q9UKN1 5478 aa7.44□□□□□ -1.22
TRADD-202ENST00000486556 A0A0A0MQY5 61 aa7.43□□□□□ -1.22
TRADD-202ENST00000486556 KRTAP4-7Q9BYR0 210 aa7.42□□□□□ -1.22
TRADD-202ENST00000486556 LCE5AQ5TCM9 118 aa7.36□□□□□ -1.23
TRADD-202ENST00000486556 MT1MQ8N339 61 aa7.35□□□□□ -1.23
TRADD-202ENST00000486556 NEBP20929 6669 aa7.24□□□□□ -1.25
TRADD-202ENST00000486556 KRTAP9-6A8MVA2 160 aa7.23□□□□□ -1.25
TRADD-202ENST00000486556 LCE1AQ5T7P2 110 aa7.23□□□□□ -1.25
TRADD-202ENST00000486556 MDN1Q9NU22 5596 aa7.2□□□□□ -1.26
TRADD-202ENST00000486556 KRTAP4-3Q9BYR4 195 aa7.17□□□□□ -1.26
TRADD-202ENST00000486556 SPRR2EP22531 72 aa7.15□□□□□ -1.26
TRADD-202ENST00000486556 SPRR2BP35325 72 aa7.15□□□□□ -1.26
TRADD-202ENST00000486556 SPRR2AP35326 72 aa7.15□□□□□ -1.26
TRADD-202ENST00000486556 KRTAP20-1Q3LI63 56 aa6.99□□□□□ -1.29
TRADD-202ENST00000486556 LOC100996750A0A140TA64 210 aa6.97□□□□□ -1.29
TRADD-202ENST00000486556 DSTQ03001 7570 aaKnown RBP6.91□□□□□ -1.3
TRADD-202ENST00000486556 KRTAP2-3P0C7H8 128 aa6.89□□□□□ -1.31
TRADD-202ENST00000486556 SPRR2DP22532 72 aa6.89□□□□□ -1.31
TRADD-202ENST00000486556 KRTAP2-4Q9BYR9 128 aa6.89□□□□□ -1.31
TRADD-202ENST00000486556 INE1O15225 51 aa6.84□□□□□ -1.31
TRADD-202ENST00000486556 KRTAP2-1Q9BYU5 128 aa6.77□□□□□ -1.33
TRADD-202ENST00000486556 KRTAP2-2Q9BYT5 123 aa6.69□□□□□ -1.34
TRADD-202ENST00000486556 LCE3BQ5TA77 95 aa6.65□□□□□ -1.34
TRADD-202ENST00000486556 KRTAP5-5Q701N2 237 aaPredicted RBP6.63□□□□□ -1.35
TRADD-202ENST00000486556 MT1AP04731 61 aa6.53□□□□□ -1.36
TRADD-202ENST00000486556 KRTAP6-1Q3LI64 71 aa6.46□□□□□ -1.38
TRADD-202ENST00000486556 KRTAP5-4Q6L8H1 288 aa6.28□□□□□ -1.4
TRADD-202ENST00000486556 SYNE1Q8NF91 8797 aaKnown RBP6.25□□□□□ -1.41
TRADD-202ENST00000486556 KRTAP9-4Q9BYQ2 154 aa6.22□□□□□ -1.41
TRADD-202ENST00000486556 KRTAP12-4P60329 112 aa6.16□□□□□ -1.42
TRADD-202ENST00000486556 LCE4AQ5TA78 99 aa6.15□□□□□ -1.43
TRADD-202ENST00000486556 KRTAP4-9Q9BYQ8 210 aa6.14□□□□□ -1.43
TRADD-202ENST00000486556 LCE1DQ5T752 114 aa6.02□□□□□ -1.45
TRADD-202ENST00000486556 MT4P47944 62 aa5.98□□□□□ -1.45
TRADD-202ENST00000486556 MT3P25713 68 aa5.95□□□□□ -1.46
TRADD-202ENST00000486556 KRTAP4-6Q9BYQ5 205 aa5.94□□□□□ -1.46
TRADD-202ENST00000486556 KRTAP6-2Q3LI66 62 aa5.92□□□□□ -1.46
TRADD-202ENST00000486556 HMCN1Q96RW7 5635 aa5.88□□□□□ -1.47
TRADD-202ENST00000486556 KRTAP20-2Q3LI61 65 aa5.85□□□□□ -1.47
TRADD-202ENST00000486556 LCE3DQ9BYE3 92 aa5.81□□□□□ -1.48
TRADD-202ENST00000486556 KRTAP5-2Q701N4 177 aa5.71□□□□□ -1.5
TRADD-202ENST00000486556 LCE3EQ5T5B0 92 aa5.66□□□□□ -1.5
TRADD-202ENST00000486556 KRTAP5-3Q6L8H2 238 aa5.64□□□□□ -1.51
TRADD-202ENST00000486556 GPR98Q8WXG9 6306 aa5.62□□□□□ -1.51
TRADD-202ENST00000486556 AHNAK2Q8IVF2 5795 aa5.55□□□□□ -1.52
TRADD-202ENST00000486556 KRTAP5-10Q6L8G5 202 aa5.47□□□□□ -1.53
TRADD-202ENST00000486556 OBSCNQ5VST9 7968 aa5.43□□□□□ -1.54
TRADD-202ENST00000486556 KRTAP5-7Q6L8G8 165 aa5.23□□□□□ -1.57
TRADD-202ENST00000486556 LCE1EQ5T753 118 aa5.15□□□□□ -1.59
TRADD-202ENST00000486556 KRTAP4-11Q9BYQ6 195 aa5.11□□□□□ -1.59
TRADD-202ENST00000486556 PRM1P04553 51 aa5.08□□□□□ -1.6
TRADD-202ENST00000486556 KRTAP5-8O75690 187 aa4.94□□□□□ -1.62
TRADD-202ENST00000486556 KRTAP5-1Q6L8H4 278 aa4.93□□□□□ -1.62
TRADD-202ENST00000486556 LCE1CQ5T751 118 aa4.79□□□□□ -1.64
TRADD-202ENST00000486556 LCE1BQ5T7P3 118 aa4.79□□□□□ -1.64
TRADD-202ENST00000486556 KRTAP4-2Q9BYR5 136 aa4.75□□□□□ -1.65
TRADD-202ENST00000486556 MUC5ACP98088 5654 aa4.73□□□□□ -1.65
TRADD-202ENST00000486556 KRTAP9-9Q9BYP9 154 aa4.62□□□□□ -1.67
TRADD-202ENST00000486556 MUC5BQ9HC84 5762 aaPredicted RBP4.54□□□□□ -1.68
TRADD-202ENST00000486556 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.5□□□□□ -1.69
TRADD-202ENST00000486556 AHNAKQ09666 5890 aaKnown RBP4.45□□□□□ -1.7
TRADD-202ENST00000486556 KRTAP21-2Q3LI59 83 aa4.24□□□□□ -1.73
TRADD-202ENST00000486556 KRTAP5-11Q6L8G4 156 aa4.2□□□□□ -1.74
TRADD-202ENST00000486556 KRTAP4-12Q9BQ66 201 aa3.88□□□□□ -1.79
TRADD-202ENST00000486556 LCE1FQ5T754 118 aa3.79□□□□□ -1.8
TRADD-202ENST00000486556 KRTAP4-4Q9BYR3 166 aa3.72□□□□□ -1.81
TRADD-202ENST00000486556 PHGR1C9JFL3 82 aa3.6□□□□□ -1.83
TRADD-202ENST00000486556 KRTAP21-1Q3LI58 79 aa3.23□□□□□ -1.89
TRADD-202ENST00000486556 MUC19Q7Z5P9 8384 aa3.21□□□□□ -1.9
TRADD-202ENST00000486556 MUC16Q8WXI7 14507 aa2.37□□□□□ -2.03
Retrieved 77 of 20,778 RNA–protein pairs in 6.2 ms