RNA–Protein interactions for RNA: ENST00000484822.1

RXRA-203, Transcript of retinoid X receptor alpha, humanhuman

TSL 2

Gene RXRA, Length 5,215 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-203ENST00000484822 LCE2DQ5TA82 110 aaPredicted RBP4.96□□□□□ -1.61
RXRA-203ENST00000484822 RNF213Q63HN8 5207 aa4.93□□□□□ -1.62
RXRA-203ENST00000484822 KRTAP19-3Q7Z4W3 81 aa4.93□□□□□ -1.62
RXRA-203ENST00000484822 MUC2Q02817 5179 aa4.92□□□□□ -1.62
RXRA-203ENST00000484822 FAT4Q6V0I7 4981 aa4.92□□□□□ -1.62
RXRA-203ENST00000484822 KRTAP9-6A0A140TA67 174 aa4.89□□□□□ -1.63
RXRA-203ENST00000484822 MT1EP04732 61 aa4.87□□□□□ -1.63
RXRA-203ENST00000484822 MT1LQ93083 61 aa4.87□□□□□ -1.63
RXRA-203ENST00000484822 HMCN2Q8NDA2 5059 aa4.81□□□□□ -1.64
RXRA-203ENST00000484822 PRM1P04553 51 aa4.75□□□□□ -1.65
RXRA-203ENST00000484822 MT3P25713 68 aa4.7□□□□□ -1.66
RXRA-203ENST00000484822 MT1MQ8N339 61 aa4.69□□□□□ -1.66
RXRA-203ENST00000484822 KRTAP20-1Q3LI63 56 aa4.68□□□□□ -1.66
RXRA-203ENST00000484822 LOC100996750A0A140TA64 210 aa4.66□□□□□ -1.66
RXRA-203ENST00000484822 MT4P47944 62 aa4.66□□□□□ -1.66
RXRA-203ENST00000484822 KRTAP19-7Q3SYF9 63 aa4.59□□□□□ -1.68
RXRA-203ENST00000484822 KRTAP4-3Q9BYR4 195 aa4.58□□□□□ -1.68
RXRA-203ENST00000484822 KRTAP9-7A8MTY7 169 aa4.56□□□□□ -1.68
RXRA-203ENST00000484822 KRTAP6-3Q3LI67 103 aa4.53□□□□□ -1.68
RXRA-203ENST00000484822 KRTAP2-3P0C7H8 128 aa4.49□□□□□ -1.69
RXRA-203ENST00000484822 KRTAP2-4Q9BYR9 128 aa4.49□□□□□ -1.69
RXRA-203ENST00000484822 LCE1AQ5T7P2 110 aa4.47□□□□□ -1.69
RXRA-203ENST00000484822 KRTAP4-9Q9BYQ8 210 aa4.46□□□□□ -1.7
RXRA-203ENST00000484822 OBSCNQ5VST9 7968 aa4.43□□□□□ -1.7
RXRA-203ENST00000484822 KRTAP2-1Q9BYU5 128 aa4.42□□□□□ -1.7
RXRA-203ENST00000484822 SYNE2Q8WXH0 6885 aaKnown RBP4.41□□□□□ -1.7
RXRA-203ENST00000484822 LCE1BQ5T7P3 118 aa4.38□□□□□ -1.71
RXRA-203ENST00000484822 LCE1DQ5T752 114 aa4.37□□□□□ -1.71
RXRA-203ENST00000484822 MT1AP04731 61 aa4.35□□□□□ -1.71
RXRA-203ENST00000484822 LCE4AQ5TA78 99 aa4.33□□□□□ -1.72
RXRA-203ENST00000484822 USH2AO75445 5202 aa4.31□□□□□ -1.72
RXRA-203ENST00000484822 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.31□□□□□ -1.72
RXRA-203ENST00000484822 KRTAP2-2Q9BYT5 123 aa4.3□□□□□ -1.72
RXRA-203ENST00000484822 KRTAP9-6A8MVA2 160 aa4.26□□□□□ -1.73
RXRA-203ENST00000484822 DSTQ03001 7570 aaKnown RBP4.26□□□□□ -1.73
RXRA-203ENST00000484822 FCGBPQ9Y6R7 5405 aaPredicted RBP4.25□□□□□ -1.73
RXRA-203ENST00000484822 LCE5AQ5TCM9 118 aa4.24□□□□□ -1.73
RXRA-203ENST00000484822 KMT2DO14686 5537 aa4.19□□□□□ -1.74
RXRA-203ENST00000484822 KRTAP6-2Q3LI66 62 aa4.14□□□□□ -1.75
RXRA-203ENST00000484822 KRTAP6-1Q3LI64 71 aa4.08□□□□□ -1.76
RXRA-203ENST00000484822 KRTAP9-4Q9BYQ2 154 aa4□□□□□ -1.77
RXRA-203ENST00000484822 MUC12Q9UKN1 5478 aa3.94□□□□□ -1.78
RXRA-203ENST00000484822 MACF1Q9UPN3 7388 aaKnown RBP3.91□□□□□ -1.78
RXRA-203ENST00000484822 KRTAP5-9P26371 169 aa3.91□□□□□ -1.78
RXRA-203ENST00000484822 SSPOA2VEC9 5147 aa3.89□□□□□ -1.79
RXRA-203ENST00000484822 LCE1CQ5T751 118 aa3.86□□□□□ -1.79
RXRA-203ENST00000484822 LCE1EQ5T753 118 aa3.86□□□□□ -1.79
RXRA-203ENST00000484822 LCE1FQ5T754 118 aa3.86□□□□□ -1.79
RXRA-203ENST00000484822 MUC19Q7Z5P9 8384 aa3.82□□□□□ -1.8
RXRA-203ENST00000484822 KRTAP9-9Q9BYP9 154 aa3.82□□□□□ -1.8
RXRA-203ENST00000484822 NEBP20929 6669 aa3.75□□□□□ -1.81
RXRA-203ENST00000484822 MDN1Q9NU22 5596 aa3.65□□□□□ -1.83
RXRA-203ENST00000484822 GPR98Q8WXG9 6306 aa3.64□□□□□ -1.83
RXRA-203ENST00000484822 KRTAP4-11Q9BYQ6 195 aa3.52□□□□□ -1.85
RXRA-203ENST00000484822 KRTAP4-6Q9BYQ5 205 aa3.48□□□□□ -1.85
RXRA-203ENST00000484822 KRTAP20-2Q3LI61 65 aa3.48□□□□□ -1.85
RXRA-203ENST00000484822 KRTAP5-4Q6L8H1 288 aa3.31□□□□□ -1.88
RXRA-203ENST00000484822 KRTAP5-5Q701N2 237 aaPredicted RBP3.25□□□□□ -1.89
RXRA-203ENST00000484822 KRTAP4-4Q9BYR3 166 aa3.14□□□□□ -1.91
RXRA-203ENST00000484822 KRTAP4-12Q9BQ66 201 aa2.97□□□□□ -1.93
RXRA-203ENST00000484822 KRTAP4-2Q9BYR5 136 aa2.97□□□□□ -1.93
RXRA-203ENST00000484822 MUC5ACP98088 5654 aa2.94□□□□□ -1.94
RXRA-203ENST00000484822 AHNAK2Q8IVF2 5795 aa2.93□□□□□ -1.94
RXRA-203ENST00000484822 KRTAP5-3Q6L8H2 238 aa2.91□□□□□ -1.94
RXRA-203ENST00000484822 HMCN1Q96RW7 5635 aa2.82□□□□□ -1.96
RXRA-203ENST00000484822 KRTAP5-2Q701N4 177 aa2.74□□□□□ -1.97
RXRA-203ENST00000484822 KRTAP5-8O75690 187 aa2.64□□□□□ -1.99
RXRA-203ENST00000484822 KRTAP5-10Q6L8G5 202 aa2.52□□□□□ -2.01
RXRA-203ENST00000484822 PHGR1C9JFL3 82 aa2.48□□□□□ -2.01
RXRA-203ENST00000484822 KRTAP5-1Q6L8H4 278 aa2.38□□□□□ -2.03
RXRA-203ENST00000484822 AHNAKQ09666 5890 aaKnown RBP2.36□□□□□ -2.03
RXRA-203ENST00000484822 KRTAP5-11Q6L8G4 156 aa2.36□□□□□ -2.03
RXRA-203ENST00000484822 MUC5BQ9HC84 5762 aaPredicted RBP2.35□□□□□ -2.03
RXRA-203ENST00000484822 KRTAP21-2Q3LI59 83 aa2.2□□□□□ -2.06
RXRA-203ENST00000484822 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.18□□□□□ -2.06
RXRA-203ENST00000484822 KRTAP5-7Q6L8G8 165 aa2.11□□□□□ -2.07
RXRA-203ENST00000484822 KRTAP21-1Q3LI58 79 aa2.04□□□□□ -2.08
RXRA-203ENST00000484822 MUC16Q8WXI7 14507 aa1.34□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 12.5 ms