RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 M0QZ58 72 aa0.35□□□□□ -2.35
LAPTM4A-202ENST00000483117 ACACAQ13085 2346 aa0.35□□□□□ -2.35
LAPTM4A-202ENST00000483117 DNAH17Q9UFH2 4485 aa0.34□□□□□ -2.35
LAPTM4A-202ENST00000483117 H3BNG1 76 aa0.34□□□□□ -2.36
LAPTM4A-202ENST00000483117 MUC17Q685J3 4493 aa0.33□□□□□ -2.36
LAPTM4A-202ENST00000483117 VPS13BQ7Z7G8 4022 aa0.33□□□□□ -2.36
LAPTM4A-202ENST00000483117 SRRM2Q9UQ35 2752 aaKnown RBP0.33□□□□□ -2.36
LAPTM4A-202ENST00000483117 TNP1P09430 55 aa0.32□□□□□ -2.36
LAPTM4A-202ENST00000483117 DNAH8Q96JB1 4490 aa0.31□□□□□ -2.36
LAPTM4A-202ENST00000483117 SPRR2AP35326 72 aa0.31□□□□□ -2.36
LAPTM4A-202ENST00000483117 SNRPGP62308 76 aaKnown RBP0.29□□□□□ -2.36
LAPTM4A-202ENST00000483117 HRNRQ86YZ3 2850 aaPredicted RBP0.28□□□□□ -2.36
LAPTM4A-202ENST00000483117 DUOX1Q9NRD9 1551 aa0.28□□□□□ -2.37
LAPTM4A-202ENST00000483117 PHGR1C9JFL3 82 aa0.27□□□□□ -2.37
LAPTM4A-202ENST00000483117 DEFB110Q30KQ9 67 aa0.26□□□□□ -2.37
LAPTM4A-202ENST00000483117 MT1AP04731 61 aa0.25□□□□□ -2.37
LAPTM4A-202ENST00000483117 DEFB124Q8NES8 71 aa0.25□□□□□ -2.37
LAPTM4A-202ENST00000483117 POLR2KP53803 58 aaKnown RBP0.24□□□□□ -2.37
LAPTM4A-202ENST00000483117 CLPSL2Q6UWE3 100 aa0.24□□□□□ -2.37
LAPTM4A-202ENST00000483117 FLGP20930 4061 aaPredicted RBP0.24□□□□□ -2.37
LAPTM4A-202ENST00000483117 GCC2Q8IWJ2 1684 aa0.22□□□□□ -2.37
LAPTM4A-202ENST00000483117 SPRR2EP22531 72 aa0.22□□□□□ -2.37
LAPTM4A-202ENST00000483117 KRTAP6-2Q3LI66 62 aa0.22□□□□□ -2.37
LAPTM4A-202ENST00000483117 KRTAP19-6Q3LI70 58 aa0.21□□□□□ -2.38
LAPTM4A-202ENST00000483117 SPART-AS1P0CW21 52 aa0.19□□□□□ -2.38
LAPTM4A-202ENST00000483117 KRTAP8-1Q8IUC2 63 aa0.19□□□□□ -2.38
LAPTM4A-202ENST00000483117 RPL39P62891 51 aaKnown RBP0.18□□□□□ -2.38
LAPTM4A-202ENST00000483117 SPRR2FQ96RM1 72 aa0.18□□□□□ -2.38
LAPTM4A-202ENST00000483117 MT4P47944 62 aa0.17□□□□□ -2.38
LAPTM4A-202ENST00000483117 MT1HL1P0DM35 61 aa0.16□□□□□ -2.38
LAPTM4A-202ENST00000483117 MT1HP80294 61 aa0.15□□□□□ -2.39
LAPTM4A-202ENST00000483117 KRTAP19-2Q3LHN2 52 aa0.15□□□□□ -2.39
LAPTM4A-202ENST00000483117 TOMM7Q9P0U1 55 aa0.15□□□□□ -2.39
LAPTM4A-202ENST00000483117 SMR3BP02814 79 aaPredicted RBP0.13□□□□□ -2.39
LAPTM4A-202ENST00000483117 KRTAP20-2Q3LI61 65 aa0.13□□□□□ -2.39
LAPTM4A-202ENST00000483117 RPL39LQ96EH5 51 aaKnown RBP0.13□□□□□ -2.39
LAPTM4A-202ENST00000483117 LINC01590Q5TEZ4 76 aa0.12□□□□□ -2.39
LAPTM4A-202ENST00000483117 SPRR2GQ9BYE4 73 aa0.12□□□□□ -2.39
LAPTM4A-202ENST00000483117 KRTAP19-5Q3LI72 72 aa0.1□□□□□ -2.39
LAPTM4A-202ENST00000483117 DEFB104AQ8WTQ1 72 aa0.1□□□□□ -2.39
LAPTM4A-202ENST00000483117 Q9Y3F1 56 aa0.1□□□□□ -2.39
LAPTM4A-202ENST00000483117 MT2AP02795 61 aa0.09□□□□□ -2.4
LAPTM4A-202ENST00000483117 STATHP02808 62 aa0.09□□□□□ -2.4
LAPTM4A-202ENST00000483117 MT1FP04733 61 aa0.09□□□□□ -2.4
LAPTM4A-202ENST00000483117 DEFB1P60022 68 aa0.09□□□□□ -2.4
LAPTM4A-202ENST00000483117 CD52P31358 61 aa0.07□□□□□ -2.4
LAPTM4A-202ENST00000483117 DEFB108AA8MXU0 73 aa0.06□□□□□ -2.4
LAPTM4A-202ENST00000483117 LEAP2Q969E1 77 aa0.06□□□□□ -2.4
LAPTM4A-202ENST00000483117 MT1BP07438 61 aa0.04□□□□□ -2.4
LAPTM4A-202ENST00000483117 ARHGAP5-AS1Q96IT6 56 aa0.04□□□□□ -2.4
LAPTM4A-202ENST00000483117 DEFB133Q30KQ1 61 aa0.03□□□□□ -2.4
LAPTM4A-202ENST00000483117 DEFB136Q30KP8 78 aa0□□□□□ -2.41
LAPTM4A-202ENST00000483117 KRTAP6-1Q3LI64 71 aa0□□□□□ -2.41
LAPTM4A-202ENST00000483117 KRTAP19-7Q3SYF9 63 aa0□□□□□ -2.41
LAPTM4A-202ENST00000483117 MT1MQ8N339 61 aa0□□□□□ -2.41
LAPTM4A-202ENST00000483117 DEFB108BQ8NET1 73 aa0□□□□□ -2.41
LAPTM4A-202ENST00000483117 RHPN1-AS1Q9BWJ2 59 aa0□□□□□ -2.41
LAPTM4A-202ENST00000483117 MT1EP04732 61 aa-0.01□□□□□ -2.41
LAPTM4A-202ENST00000483117 MT1GP13640 62 aa-0.01□□□□□ -2.41
LAPTM4A-202ENST00000483117 PRCDQ00LT1 54 aa-0.01□□□□□ -2.41
LAPTM4A-202ENST00000483117 KRTAP19-8Q3LI54 63 aa-0.01□□□□□ -2.41
LAPTM4A-202ENST00000483117 MT1XP80297 61 aa-0.02□□□□□ -2.41
LAPTM4A-202ENST00000483117 K7EIM0 57 aa-0.03□□□□□ -2.41
LAPTM4A-202ENST00000483117 H3BSH0 61 aa-0.05□□□□□ -2.42
LAPTM4A-202ENST00000483117 MT1LQ93083 61 aa-0.05□□□□□ -2.42
LAPTM4A-202ENST00000483117 DEFB4AO15263 64 aa-0.06□□□□□ -2.42
LAPTM4A-202ENST00000483117 H3BUX3 64 aa-0.07□□□□□ -2.42
LAPTM4A-202ENST00000483117 RPS29P62273 56 aaKnown RBP-0.09□□□□□ -2.42
LAPTM4A-202ENST00000483117 COX14Q96I36 57 aa-0.09□□□□□ -2.42
LAPTM4A-202ENST00000483117 HTN3P15516 51 aa-0.12□□□□□ -2.43
LAPTM4A-202ENST00000483117 A0A096LPF7 62 aa-0.13□□□□□ -2.43
LAPTM4A-202ENST00000483117 TMEM167AQ8TBQ9 72 aa-0.13□□□□□ -2.43
LAPTM4A-202ENST00000483117 TTTY10Q9BZA0 68 aa-0.13□□□□□ -2.43
LAPTM4A-202ENST00000483117 A0A096LNI7 61 aa-0.15□□□□□ -2.43
LAPTM4A-202ENST00000483117 LINC01556Q5JQF7 62 aa-0.15□□□□□ -2.43
LAPTM4A-202ENST00000483117 APELAP0DMC3 54 aa-0.16□□□□□ -2.44
LAPTM4A-202ENST00000483117 HTN1P15515 57 aa-0.19□□□□□ -2.44
LAPTM4A-202ENST00000483117 RPL39P5Q59GN2 51 aa-0.25□□□□□ -2.45
Retrieved 78 of 20,778 RNA–protein pairs in 12 ms