RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 PRR15LQ9BU68 103 aa2.75□□□□□ -1.97
GAPVD1-217ENST00000479511 C9orf92A6NGG3 77 aa2.73□□□□□ -1.97
GAPVD1-217ENST00000479511 SYNE2Q8WXH0 6885 aaKnown RBP2.72□□□□□ -1.97
GAPVD1-217ENST00000479511 KRTAP12-4P60329 112 aa2.72□□□□□ -1.97
GAPVD1-217ENST00000479511 LINC01558Q9Y6Z2 57 aa2.71□□□□□ -1.98
GAPVD1-217ENST00000479511 M0R2T5 61 aa2.7□□□□□ -1.98
GAPVD1-217ENST00000479511 SPINK7P58062 85 aa2.7□□□□□ -1.98
GAPVD1-217ENST00000479511 USH2AO75445 5202 aa2.7□□□□□ -1.98
GAPVD1-217ENST00000479511 KRTAP2-3P0C7H8 128 aa2.69□□□□□ -1.98
GAPVD1-217ENST00000479511 KRTAP2-4Q9BYR9 128 aa2.69□□□□□ -1.98
GAPVD1-217ENST00000479511 FCGBPQ9Y6R7 5405 aaPredicted RBP2.68□□□□□ -1.98
GAPVD1-217ENST00000479511 MACF1Q9UPN3 7388 aaKnown RBP2.68□□□□□ -1.98
GAPVD1-217ENST00000479511 A0A1B0GU69 56 aa2.67□□□□□ -1.98
GAPVD1-217ENST00000479511 RPL37P61927 97 aaKnown RBP2.67□□□□□ -1.98
GAPVD1-217ENST00000479511 MT1HP80294 61 aa2.66□□□□□ -1.98
GAPVD1-217ENST00000479511 NEBP20929 6669 aa2.65□□□□□ -1.99
GAPVD1-217ENST00000479511 Q5VV11 94 aa2.65□□□□□ -1.99
GAPVD1-217ENST00000479511 COX6B2Q6YFQ2 88 aa2.65□□□□□ -1.99
GAPVD1-217ENST00000479511 UQCR11O14957 56 aa2.63□□□□□ -1.99
GAPVD1-217ENST00000479511 KRTAP4-1Q9BYQ7 146 aa2.59□□□□□ -1.99
GAPVD1-217ENST00000479511 H1FX-AS1Q4G0G2 97 aa2.58□□□□□ -2
GAPVD1-217ENST00000479511 KRTAP2-1Q9BYU5 128 aa2.57□□□□□ -2
GAPVD1-217ENST00000479511 S4R3F8 94 aa2.57□□□□□ -2
GAPVD1-217ENST00000479511 KRTAP5-8O75690 187 aa2.56□□□□□ -2
GAPVD1-217ENST00000479511 SPATA8Q6RVD6 105 aa2.56□□□□□ -2
GAPVD1-217ENST00000479511 FLGP20930 4061 aaPredicted RBP2.56□□□□□ -2
GAPVD1-217ENST00000479511 KRTAP19-6Q3LI70 58 aa2.54□□□□□ -2
GAPVD1-217ENST00000479511 KRTAP19-2Q3LHN2 52 aa2.53□□□□□ -2
GAPVD1-217ENST00000479511 GPR98Q8WXG9 6306 aa2.5□□□□□ -2.01
GAPVD1-217ENST00000479511 H0YAA0 97 aa2.47□□□□□ -2.01
GAPVD1-217ENST00000479511 M0QZ58 72 aa2.47□□□□□ -2.01
GAPVD1-217ENST00000479511 MUC12Q9UKN1 5478 aa2.47□□□□□ -2.01
GAPVD1-217ENST00000479511 KMT2DO14686 5537 aa2.46□□□□□ -2.02
GAPVD1-217ENST00000479511 A0A0D9SG42 100 aa2.39□□□□□ -2.03
GAPVD1-217ENST00000479511 CRIPTQ9P021 101 aa2.39□□□□□ -2.03
GAPVD1-217ENST00000479511 MT2AP02795 61 aa2.36□□□□□ -2.03
GAPVD1-217ENST00000479511 SPRR2EP22531 72 aa2.35□□□□□ -2.03
GAPVD1-217ENST00000479511 SPRR2BP35325 72 aa2.35□□□□□ -2.03
GAPVD1-217ENST00000479511 SPRR2AP35326 72 aa2.35□□□□□ -2.03
GAPVD1-217ENST00000479511 KRTAP5-7Q6L8G8 165 aa2.34□□□□□ -2.03
GAPVD1-217ENST00000479511 MDN1Q9NU22 5596 aa2.34□□□□□ -2.04
GAPVD1-217ENST00000479511 MT1FP04733 61 aa2.33□□□□□ -2.04
GAPVD1-217ENST00000479511 MUC19Q7Z5P9 8384 aa2.33□□□□□ -2.04
GAPVD1-217ENST00000479511 SPRR2DP22532 72 aa2.29□□□□□ -2.04
GAPVD1-217ENST00000479511 PLAC4Q8WY50 150 aa2.26□□□□□ -2.05
GAPVD1-217ENST00000479511 KRTAP5-10Q6L8G5 202 aa2.24□□□□□ -2.05
GAPVD1-217ENST00000479511 SPRR2FQ96RM1 72 aa2.23□□□□□ -2.05
GAPVD1-217ENST00000479511 SPRR2GQ9BYE4 73 aa2.21□□□□□ -2.06
GAPVD1-217ENST00000479511 TNP1P09430 55 aa2.19□□□□□ -2.06
GAPVD1-217ENST00000479511 C10orf95Q9H7T3 257 aa2.16□□□□□ -2.06
GAPVD1-217ENST00000479511 AHNAK2Q8IVF2 5795 aa2.15□□□□□ -2.07
GAPVD1-217ENST00000479511 KRTAP19-8Q3LI54 63 aa2.12□□□□□ -2.07
GAPVD1-217ENST00000479511 MT1BP07438 61 aa2.11□□□□□ -2.07
GAPVD1-217ENST00000479511 DSTQ03001 7570 aaKnown RBP2.11□□□□□ -2.07
GAPVD1-217ENST00000479511 KRTAP8-1Q8IUC2 63 aa2.06□□□□□ -2.08
GAPVD1-217ENST00000479511 KRTAP21-2Q3LI59 83 aa2.05□□□□□ -2.08
GAPVD1-217ENST00000479511 HMCN1Q96RW7 5635 aa2.04□□□□□ -2.08
GAPVD1-217ENST00000479511 MT4P47944 62 aa2□□□□□ -2.09
GAPVD1-217ENST00000479511 MT1XP80297 61 aa2□□□□□ -2.09
GAPVD1-217ENST00000479511 AHNAKQ09666 5890 aaKnown RBP1.9□□□□□ -2.11
GAPVD1-217ENST00000479511 MUC5ACP98088 5654 aa1.85□□□□□ -2.11
GAPVD1-217ENST00000479511 KRTAP19-5Q3LI72 72 aa1.85□□□□□ -2.11
GAPVD1-217ENST00000479511 MUC5BQ9HC84 5762 aaPredicted RBP1.85□□□□□ -2.11
GAPVD1-217ENST00000479511 KRTAP19-3Q7Z4W3 81 aa1.78□□□□□ -2.12
GAPVD1-217ENST00000479511 KRTAP19-7Q3SYF9 63 aa1.77□□□□□ -2.13
GAPVD1-217ENST00000479511 MT1EP04732 61 aa1.76□□□□□ -2.13
GAPVD1-217ENST00000479511 MT1LQ93083 61 aa1.74□□□□□ -2.13
GAPVD1-217ENST00000479511 MT1GP13640 62 aa1.73□□□□□ -2.13
GAPVD1-217ENST00000479511 KRTAP20-2Q3LI61 65 aa1.73□□□□□ -2.13
GAPVD1-217ENST00000479511 MT1MQ8N339 61 aa1.68□□□□□ -2.14
GAPVD1-217ENST00000479511 SYNE1Q8NF91 8797 aaKnown RBP1.52□□□□□ -2.17
GAPVD1-217ENST00000479511 MT1AP04731 61 aa1.49□□□□□ -2.17
GAPVD1-217ENST00000479511 KRTAP6-1Q3LI64 71 aa1.44□□□□□ -2.18
GAPVD1-217ENST00000479511 PHGR1C9JFL3 82 aa1.38□□□□□ -2.19
GAPVD1-217ENST00000479511 KRTAP6-2Q3LI66 62 aa1.36□□□□□ -2.19
GAPVD1-217ENST00000479511 MUC16Q8WXI7 14507 aa1.2□□□□□ -2.22
GAPVD1-217ENST00000479511 PRM1P04553 51 aa1.19□□□□□ -2.22
GAPVD1-217ENST00000479511 KRTAP21-1Q3LI58 79 aa1.1□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 6.5 ms