RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 M0QY20 66 aa0.45□□□□□ -2.34
SMARCA1-204ENST00000478420 RPL39P62891 51 aaKnown RBP0.45□□□□□ -2.34
SMARCA1-204ENST00000478420 CLPSL2Q6UWE3 100 aa0.45□□□□□ -2.34
SMARCA1-204ENST00000478420 VPS13DQ5THJ4 4388 aa0.45□□□□□ -2.34
SMARCA1-204ENST00000478420 PKD1P98161 4303 aa0.44□□□□□ -2.34
SMARCA1-204ENST00000478420 C9orf92A6NGG3 77 aa0.44□□□□□ -2.34
SMARCA1-204ENST00000478420 SPRR2DP22532 72 aa0.44□□□□□ -2.34
SMARCA1-204ENST00000478420 M0QZ58 72 aa0.43□□□□□ -2.34
SMARCA1-204ENST00000478420 DNAH3Q8TD57 4116 aa0.43□□□□□ -2.34
SMARCA1-204ENST00000478420 VPS13BQ7Z7G8 4022 aa0.42□□□□□ -2.34
SMARCA1-204ENST00000478420 DEFB104AQ8WTQ1 72 aa0.42□□□□□ -2.34
SMARCA1-204ENST00000478420 SMR3BP02814 79 aaPredicted RBP0.41□□□□□ -2.34
SMARCA1-204ENST00000478420 KRTAP19-6Q3LI70 58 aa0.41□□□□□ -2.34
SMARCA1-204ENST00000478420 RPL39LQ96EH5 51 aaKnown RBP0.41□□□□□ -2.34
SMARCA1-204ENST00000478420 SPRR2EP22531 72 aa0.4□□□□□ -2.35
SMARCA1-204ENST00000478420 SPRR2BP35325 72 aa0.4□□□□□ -2.35
SMARCA1-204ENST00000478420 SPRR2AP35326 72 aa0.4□□□□□ -2.35
SMARCA1-204ENST00000478420 DNAH17Q9UFH2 4485 aa0.4□□□□□ -2.35
SMARCA1-204ENST00000478420 MUC17Q685J3 4493 aa0.39□□□□□ -2.35
SMARCA1-204ENST00000478420 DNAH2Q9P225 4427 aa0.39□□□□□ -2.35
SMARCA1-204ENST00000478420 PHGR1C9JFL3 82 aa0.39□□□□□ -2.35
SMARCA1-204ENST00000478420 H3BNG1 76 aa0.39□□□□□ -2.35
SMARCA1-204ENST00000478420 FLGP20930 4061 aaPredicted RBP0.39□□□□□ -2.35
SMARCA1-204ENST00000478420 TNP1P09430 55 aa0.38□□□□□ -2.35
SMARCA1-204ENST00000478420 ARHGAP5-AS1Q96IT6 56 aa0.38□□□□□ -2.35
SMARCA1-204ENST00000478420 LEAP2Q969E1 77 aa0.37□□□□□ -2.35
SMARCA1-204ENST00000478420 Q9Y3F1 56 aa0.37□□□□□ -2.35
SMARCA1-204ENST00000478420 STATHP02808 62 aa0.36□□□□□ -2.35
SMARCA1-204ENST00000478420 TOMM7Q9P0U1 55 aa0.36□□□□□ -2.35
SMARCA1-204ENST00000478420 DNAH8Q96JB1 4490 aa0.35□□□□□ -2.35
SMARCA1-204ENST00000478420 MT4P47944 62 aa0.35□□□□□ -2.35
SMARCA1-204ENST00000478420 SPRR2FQ96RM1 72 aa0.33□□□□□ -2.36
SMARCA1-204ENST00000478420 MT1AP04731 61 aa0.32□□□□□ -2.36
SMARCA1-204ENST00000478420 DEFB110Q30KQ9 67 aa0.32□□□□□ -2.36
SMARCA1-204ENST00000478420 SPART-AS1P0CW21 52 aa0.31□□□□□ -2.36
SMARCA1-204ENST00000478420 MT1HL1P0DM35 61 aa0.3□□□□□ -2.36
SMARCA1-204ENST00000478420 CD52P31358 61 aa0.3□□□□□ -2.36
SMARCA1-204ENST00000478420 MT1HP80294 61 aa0.3□□□□□ -2.36
SMARCA1-204ENST00000478420 KRTAP6-2Q3LI66 62 aa0.3□□□□□ -2.36
SMARCA1-204ENST00000478420 KRTAP8-1Q8IUC2 63 aa0.29□□□□□ -2.36
SMARCA1-204ENST00000478420 LINC01590Q5TEZ4 76 aa0.28□□□□□ -2.36
SMARCA1-204ENST00000478420 PRCDQ00LT1 54 aa0.27□□□□□ -2.37
SMARCA1-204ENST00000478420 K7EIM0 57 aa0.26□□□□□ -2.37
SMARCA1-204ENST00000478420 DEFB133Q30KQ1 61 aa0.26□□□□□ -2.37
SMARCA1-204ENST00000478420 TTTY10Q9BZA0 68 aa0.26□□□□□ -2.37
SMARCA1-204ENST00000478420 DEFB108AA8MXU0 73 aa0.25□□□□□ -2.37
SMARCA1-204ENST00000478420 KRTAP20-2Q3LI61 65 aa0.25□□□□□ -2.37
SMARCA1-204ENST00000478420 KRTAP19-5Q3LI72 72 aa0.23□□□□□ -2.37
SMARCA1-204ENST00000478420 H3BSH0 61 aa0.22□□□□□ -2.37
SMARCA1-204ENST00000478420 MT2AP02795 61 aa0.19□□□□□ -2.38
SMARCA1-204ENST00000478420 KRTAP19-2Q3LHN2 52 aa0.19□□□□□ -2.38
SMARCA1-204ENST00000478420 MT1FP04733 61 aa0.18□□□□□ -2.38
SMARCA1-204ENST00000478420 DEFB108BQ8NET1 73 aa0.17□□□□□ -2.38
SMARCA1-204ENST00000478420 TMEM167AQ8TBQ9 72 aa0.17□□□□□ -2.38
SMARCA1-204ENST00000478420 MT1BP07438 61 aa0.15□□□□□ -2.39
SMARCA1-204ENST00000478420 DEFB1P60022 68 aa0.15□□□□□ -2.39
SMARCA1-204ENST00000478420 RHPN1-AS1Q9BWJ2 59 aa0.15□□□□□ -2.39
SMARCA1-204ENST00000478420 SPRR2GQ9BYE4 73 aa0.15□□□□□ -2.39
SMARCA1-204ENST00000478420 H3BUX3 64 aa0.13□□□□□ -2.39
SMARCA1-204ENST00000478420 COX14Q96I36 57 aa0.13□□□□□ -2.39
SMARCA1-204ENST00000478420 A0A096LNI7 61 aa0.11□□□□□ -2.39
SMARCA1-204ENST00000478420 MT1EP04732 61 aa0.1□□□□□ -2.39
SMARCA1-204ENST00000478420 DEFB136Q30KP8 78 aa0.1□□□□□ -2.39
SMARCA1-204ENST00000478420 RPL39P5Q59GN2 51 aa0.1□□□□□ -2.39
SMARCA1-204ENST00000478420 DEFB4AO15263 64 aa0.09□□□□□ -2.4
SMARCA1-204ENST00000478420 MT1GP13640 62 aa0.09□□□□□ -2.4
SMARCA1-204ENST00000478420 RPS29P62273 56 aaKnown RBP0.09□□□□□ -2.4
SMARCA1-204ENST00000478420 HTN3P15516 51 aa0.08□□□□□ -2.4
SMARCA1-204ENST00000478420 MT1LQ93083 61 aa0.06□□□□□ -2.4
SMARCA1-204ENST00000478420 KRTAP19-8Q3LI54 63 aa0.05□□□□□ -2.4
SMARCA1-204ENST00000478420 MT1MQ8N339 61 aa0.05□□□□□ -2.4
SMARCA1-204ENST00000478420 KRTAP6-1Q3LI64 71 aa0.04□□□□□ -2.4
SMARCA1-204ENST00000478420 MT1XP80297 61 aa0.03□□□□□ -2.4
SMARCA1-204ENST00000478420 KRTAP19-7Q3SYF9 63 aa0.03□□□□□ -2.4
SMARCA1-204ENST00000478420 HTN1P15515 57 aa0.02□□□□□ -2.41
SMARCA1-204ENST00000478420 LINC01556Q5JQF7 62 aa0□□□□□ -2.41
SMARCA1-204ENST00000478420 APELAP0DMC3 54 aa-0.01□□□□□ -2.41
SMARCA1-204ENST00000478420 A0A096LPF7 62 aa-0.03□□□□□ -2.41
Retrieved 78 of 20,778 RNA–protein pairs in 123 ms