RNA–Protein interactions for RNA: ENST00000476672.1

FXR1-212, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2

Gene FXR1, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-212ENST00000476672 KRTAP25-1Q3LHN0 102 aa3.16□□□□□ -1.9
FXR1-212ENST00000476672 CAMK2N1Q7Z7J9 78 aa3.16□□□□□ -1.9
FXR1-212ENST00000476672 KRTAP19-8Q3LI54 63 aa3.15□□□□□ -1.91
FXR1-212ENST00000476672 C10orf95Q9H7T3 257 aa3.15□□□□□ -1.91
FXR1-212ENST00000476672 PLAC4Q8WY50 150 aa3.14□□□□□ -1.91
FXR1-212ENST00000476672 MT1BP07438 61 aa3.08□□□□□ -1.92
FXR1-212ENST00000476672 TNP1P09430 55 aa3.04□□□□□ -1.92
FXR1-212ENST00000476672 KRTAP10-12P60413 245 aa3.01□□□□□ -1.93
FXR1-212ENST00000476672 PP632Q6XCG6 107 aa3.01□□□□□ -1.93
FXR1-212ENST00000476672 MT1XP80297 61 aa2.99□□□□□ -1.93
FXR1-212ENST00000476672 KRTAP5-8O75690 187 aa2.98□□□□□ -1.93
FXR1-212ENST00000476672 PRO2289Q9P1D8 64 aa2.96□□□□□ -1.94
FXR1-212ENST00000476672 USH2AO75445 5202 aa2.9□□□□□ -1.94
FXR1-212ENST00000476672 LCE3AQ5TA76 89 aa2.87□□□□□ -1.95
FXR1-212ENST00000476672 KRTAP8-1Q8IUC2 63 aa2.85□□□□□ -1.95
FXR1-212ENST00000476672 KRTAP19-6Q3LI70 58 aa2.84□□□□□ -1.95
FXR1-212ENST00000476672 SSPOA2VEC9 5147 aa2.8□□□□□ -1.96
FXR1-212ENST00000476672 MT3P25713 68 aa2.78□□□□□ -1.96
FXR1-212ENST00000476672 KRTAP12-3P60328 96 aa2.77□□□□□ -1.97
FXR1-212ENST00000476672 KRTAP19-5Q3LI72 72 aa2.72□□□□□ -1.97
FXR1-212ENST00000476672 SPRR5A0A1B0GTR4 108 aa2.7□□□□□ -1.98
FXR1-212ENST00000476672 FSIP2Q5CZC0 6907 aa2.68□□□□□ -1.98
FXR1-212ENST00000476672 KRTAP19-7Q3SYF9 63 aa2.68□□□□□ -1.98
FXR1-212ENST00000476672 FCGBPQ9Y6R7 5405 aaPredicted RBP2.65□□□□□ -1.99
FXR1-212ENST00000476672 KMT2DO14686 5537 aa2.64□□□□□ -1.99
FXR1-212ENST00000476672 MT1EP04732 61 aa2.62□□□□□ -1.99
FXR1-212ENST00000476672 LUZP6Q538Z0 58 aa2.62□□□□□ -1.99
FXR1-212ENST00000476672 NDUFAF8A1L188 74 aa2.61□□□□□ -1.99
FXR1-212ENST00000476672 LCE3CQ5T5A8 94 aa2.61□□□□□ -1.99
FXR1-212ENST00000476672 CRCT1Q9UGL9 99 aa2.6□□□□□ -1.99
FXR1-212ENST00000476672 MT1LQ93083 61 aa2.58□□□□□ -2
FXR1-212ENST00000476672 KRTAP5-5Q701N2 237 aaPredicted RBP2.55□□□□□ -2
FXR1-212ENST00000476672 MT1GP13640 62 aa2.51□□□□□ -2.01
FXR1-212ENST00000476672 MACF1Q9UPN3 7388 aaKnown RBP2.51□□□□□ -2.01
FXR1-212ENST00000476672 KRTAP19-3Q7Z4W3 81 aa2.5□□□□□ -2.01
FXR1-212ENST00000476672 LCE1CQ5T751 118 aa2.49□□□□□ -2.01
FXR1-212ENST00000476672 LCE1BQ5T7P3 118 aa2.49□□□□□ -2.01
FXR1-212ENST00000476672 SPRR2FQ96RM1 72 aa2.49□□□□□ -2.01
FXR1-212ENST00000476672 MT1MQ8N339 61 aa2.46□□□□□ -2.02
FXR1-212ENST00000476672 SYNE2Q8WXH0 6885 aaKnown RBP2.45□□□□□ -2.02
FXR1-212ENST00000476672 LCE1FQ5T754 118 aa2.44□□□□□ -2.02
FXR1-212ENST00000476672 MUC12Q9UKN1 5478 aa2.41□□□□□ -2.02
FXR1-212ENST00000476672 KRTAP6-3Q3LI67 103 aa2.41□□□□□ -2.02
FXR1-212ENST00000476672 SPRR2EP22531 72 aa2.35□□□□□ -2.03
FXR1-212ENST00000476672 SPRR2BP35325 72 aa2.35□□□□□ -2.03
FXR1-212ENST00000476672 SPRR2AP35326 72 aa2.35□□□□□ -2.03
FXR1-212ENST00000476672 KRTAP2-3P0C7H8 128 aa2.33□□□□□ -2.04
FXR1-212ENST00000476672 KRTAP2-4Q9BYR9 128 aa2.33□□□□□ -2.04
FXR1-212ENST00000476672 KRTAP2-1Q9BYU5 128 aa2.33□□□□□ -2.04
FXR1-212ENST00000476672 MDN1Q9NU22 5596 aa2.3□□□□□ -2.04
FXR1-212ENST00000476672 SPRR2DP22532 72 aa2.26□□□□□ -2.05
FXR1-212ENST00000476672 NEBP20929 6669 aa2.23□□□□□ -2.05
FXR1-212ENST00000476672 DSTQ03001 7570 aaKnown RBP2.22□□□□□ -2.05
FXR1-212ENST00000476672 MT1AP04731 61 aa2.2□□□□□ -2.06
FXR1-212ENST00000476672 INE1O15225 51 aa2.19□□□□□ -2.06
FXR1-212ENST00000476672 KRTAP6-1Q3LI64 71 aa2.16□□□□□ -2.06
FXR1-212ENST00000476672 HMCN1Q96RW7 5635 aa2.16□□□□□ -2.06
FXR1-212ENST00000476672 MUC19Q7Z5P9 8384 aa2.15□□□□□ -2.07
FXR1-212ENST00000476672 LCE3EQ5T5B0 92 aa2.14□□□□□ -2.07
FXR1-212ENST00000476672 SYNE1Q8NF91 8797 aaKnown RBP2.08□□□□□ -2.08
FXR1-212ENST00000476672 KRTAP12-4P60329 112 aa2.04□□□□□ -2.08
FXR1-212ENST00000476672 KRTAP20-1Q3LI63 56 aa2□□□□□ -2.09
FXR1-212ENST00000476672 KRTAP5-7Q6L8G8 165 aa2□□□□□ -2.09
FXR1-212ENST00000476672 KRTAP6-2Q3LI66 62 aa1.98□□□□□ -2.09
FXR1-212ENST00000476672 LCE3DQ9BYE3 92 aa1.96□□□□□ -2.1
FXR1-212ENST00000476672 MT4P47944 62 aa1.95□□□□□ -2.1
FXR1-212ENST00000476672 KRTAP20-2Q3LI61 65 aa1.93□□□□□ -2.1
FXR1-212ENST00000476672 KRTAP21-2Q3LI59 83 aa1.85□□□□□ -2.11
FXR1-212ENST00000476672 GPR98Q8WXG9 6306 aa1.72□□□□□ -2.13
FXR1-212ENST00000476672 PRM1P04553 51 aa1.69□□□□□ -2.14
FXR1-212ENST00000476672 AHNAK2Q8IVF2 5795 aa1.63□□□□□ -2.15
FXR1-212ENST00000476672 KRTAP5-10Q6L8G5 202 aa1.62□□□□□ -2.15
FXR1-212ENST00000476672 MUC5ACP98088 5654 aa1.57□□□□□ -2.16
FXR1-212ENST00000476672 MUC5BQ9HC84 5762 aaPredicted RBP1.36□□□□□ -2.19
FXR1-212ENST00000476672 AHNAKQ09666 5890 aaKnown RBP1.31□□□□□ -2.2
FXR1-212ENST00000476672 PHGR1C9JFL3 82 aa1.2□□□□□ -2.22
FXR1-212ENST00000476672 KRTAP21-1Q3LI58 79 aa1.08□□□□□ -2.24
FXR1-212ENST00000476672 MUC16Q8WXI7 14507 aa0.74□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 130.2 ms