RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 STATHP02808 62 aa0.24□□□□□ -2.37
SMC5-203ENST00000475540 H3BUA1 57 aa0.2□□□□□ -2.38
SMC5-203ENST00000475540 TMEM167BQ9NRX6 74 aa0.2□□□□□ -2.38
SMC5-203ENST00000475540 C9orf92A6NGG3 77 aa0.19□□□□□ -2.38
SMC5-203ENST00000475540 MT2AP02795 61 aa0.19□□□□□ -2.38
SMC5-203ENST00000475540 MT1FP04733 61 aa0.19□□□□□ -2.38
SMC5-203ENST00000475540 KRTAP8-1Q8IUC2 63 aa0.18□□□□□ -2.38
SMC5-203ENST00000475540 SPRR2GQ9BYE4 73 aa0.18□□□□□ -2.38
SMC5-203ENST00000475540 TIMM8BQ9Y5J9 83 aaPredicted RBP0.18□□□□□ -2.38
SMC5-203ENST00000475540 Q9Y3F1 56 aa0.17□□□□□ -2.38
SMC5-203ENST00000475540 H0YGX0 51 aa0.15□□□□□ -2.39
SMC5-203ENST00000475540 H3BNG1 76 aa0.15□□□□□ -2.39
SMC5-203ENST00000475540 LINC00308Q8TCZ7 52 aa0.13□□□□□ -2.39
SMC5-203ENST00000475540 DEFB108AA8MXU0 73 aa0.11□□□□□ -2.39
SMC5-203ENST00000475540 PLNP26678 52 aa0.11□□□□□ -2.39
SMC5-203ENST00000475540 CD52P31358 61 aa0.11□□□□□ -2.39
SMC5-203ENST00000475540 KRTAP6-2Q3LI66 62 aa0.09□□□□□ -2.4
SMC5-203ENST00000475540 MT1BP07438 61 aa0.08□□□□□ -2.4
SMC5-203ENST00000475540 NOP10Q9NPE3 64 aaKnown RBP0.08□□□□□ -2.4
SMC5-203ENST00000475540 ABRACLQ9P1F3 81 aa0.07□□□□□ -2.4
SMC5-203ENST00000475540 IGLV5-48A0A075B6I7 105 aa0.06□□□□□ -2.4
SMC5-203ENST00000475540 CMC2Q9NRP2 79 aa0.05□□□□□ -2.4
SMC5-203ENST00000475540 DEFB133Q30KQ1 61 aa0.04□□□□□ -2.4
SMC5-203ENST00000475540 SMIM27A0A1W2PRY6 76 aa0□□□□□ -2.41
SMC5-203ENST00000475540 MT1MQ8N339 61 aa-0.02□□□□□ -2.41
SMC5-203ENST00000475540 MT1AP04731 61 aa-0.03□□□□□ -2.41
SMC5-203ENST00000475540 KAAG1Q9UBP8 84 aa-0.03□□□□□ -2.41
SMC5-203ENST00000475540 MMP24-AS1A0A0U1RRL7 71 aa-0.04□□□□□ -2.42
SMC5-203ENST00000475540 SNRPGP15A8MWD9 76 aa-0.04□□□□□ -2.42
SMC5-203ENST00000475540 MT1GP13640 62 aa-0.04□□□□□ -2.42
SMC5-203ENST00000475540 DEFB108BQ8NET1 73 aa-0.04□□□□□ -2.42
SMC5-203ENST00000475540 DEFB110Q30KQ9 67 aa-0.06□□□□□ -2.42
SMC5-203ENST00000475540 KRTAP6-1Q3LI64 71 aa-0.06□□□□□ -2.42
SMC5-203ENST00000475540 MT1EP04732 61 aa-0.07□□□□□ -2.42
SMC5-203ENST00000475540 KRTAP19-8Q3LI54 63 aa-0.07□□□□□ -2.42
SMC5-203ENST00000475540 WFDC10BQ8IUB3 73 aa-0.07□□□□□ -2.42
SMC5-203ENST00000475540 H3BSH0 61 aa-0.09□□□□□ -2.42
SMC5-203ENST00000475540 M0QY20 66 aa-0.09□□□□□ -2.42
SMC5-203ENST00000475540 KRTAP19-7Q3SYF9 63 aa-0.09□□□□□ -2.42
SMC5-203ENST00000475540 TNP1P09430 55 aa-0.1□□□□□ -2.43
SMC5-203ENST00000475540 MT1XP80297 61 aa-0.11□□□□□ -2.43
SMC5-203ENST00000475540 LINC01546A6NGU7 62 aa-0.12□□□□□ -2.43
SMC5-203ENST00000475540 A8MTW9 85 aa-0.14□□□□□ -2.43
SMC5-203ENST00000475540 DEFB136Q30KP8 78 aa-0.14□□□□□ -2.43
SMC5-203ENST00000475540 DEFB4AO15263 64 aa-0.16□□□□□ -2.44
SMC5-203ENST00000475540 MT1LQ93083 61 aa-0.16□□□□□ -2.44
SMC5-203ENST00000475540 SMIM2Q9BVW6 85 aa-0.16□□□□□ -2.44
SMC5-203ENST00000475540 H3BUX3 64 aa-0.17□□□□□ -2.44
SMC5-203ENST00000475540 M0QZ58 72 aa-0.18□□□□□ -2.44
SMC5-203ENST00000475540 RPS29P62273 56 aaKnown RBP-0.18□□□□□ -2.44
SMC5-203ENST00000475540 DEFB131AP59861 70 aa-0.19□□□□□ -2.44
SMC5-203ENST00000475540 TTTY10Q9BZA0 68 aa-0.22□□□□□ -2.44
SMC5-203ENST00000475540 COX14Q96I36 57 aa-0.23□□□□□ -2.45
SMC5-203ENST00000475540 HTN3P15516 51 aa-0.26□□□□□ -2.45
SMC5-203ENST00000475540 KRTAP19-5Q3LI72 72 aa-0.26□□□□□ -2.45
SMC5-203ENST00000475540 CLPSL2Q6UWE3 100 aa-0.26□□□□□ -2.45
SMC5-203ENST00000475540 SPART-AS1P0CW21 52 aa-0.3□□□□□ -2.46
SMC5-203ENST00000475540 NDUFA1O15239 70 aa-0.33□□□□□ -2.46
SMC5-203ENST00000475540 TOMM5Q8N4H5 51 aa-0.33□□□□□ -2.46
SMC5-203ENST00000475540 LEAP2Q969E1 77 aa-0.35□□□□□ -2.47
SMC5-203ENST00000475540 A0A096LPF7 62 aa-0.36□□□□□ -2.47
SMC5-203ENST00000475540 LINC01556Q5JQF7 62 aa-0.36□□□□□ -2.47
SMC5-203ENST00000475540 DEFB1P60022 68 aa-0.39□□□□□ -2.47
SMC5-203ENST00000475540 APELAP0DMC3 54 aa-0.4□□□□□ -2.47
SMC5-203ENST00000475540 POLR2KP53803 58 aaKnown RBP-0.4□□□□□ -2.47
SMC5-203ENST00000475540 A0A096LNI7 61 aa-0.41□□□□□ -2.48
SMC5-203ENST00000475540 HTN1P15515 57 aa-0.54□□□□□ -2.5
SMC5-203ENST00000475540 RHPN1-AS1Q9BWJ2 59 aa-0.56□□□□□ -2.5
SMC5-203ENST00000475540 TMEM167AQ8TBQ9 72 aa-0.61□□□□□ -2.51
SMC5-203ENST00000475540 PRCDQ00LT1 54 aa-0.64□□□□□ -2.51
SMC5-203ENST00000475540 K7EIM0 57 aa-0.73□□□□□ -2.53
SMC5-203ENST00000475540 RPL39P5Q59GN2 51 aa-0.75□□□□□ -2.53
SMC5-203ENST00000475540 TOMM7Q9P0U1 55 aa-0.75□□□□□ -2.53
SMC5-203ENST00000475540 RPL39P62891 51 aaKnown RBP-0.77□□□□□ -2.53
SMC5-203ENST00000475540 LINC01590Q5TEZ4 76 aa-0.81□□□□□ -2.54
SMC5-203ENST00000475540 ARHGAP5-AS1Q96IT6 56 aa-0.86□□□□□ -2.55
SMC5-203ENST00000475540 SNRPGP62308 76 aaKnown RBP-0.89□□□□□ -2.55
SMC5-203ENST00000475540 RPL39LQ96EH5 51 aaKnown RBP-0.89□□□□□ -2.55
Retrieved 78 of 20,778 RNA–protein pairs in 15.2 ms