RNA–Protein interactions for RNA: ENST00000475057.5

SUPT3H-205, Transcript of SPT3 homolog, SAGA and STAGA complex component, humanhuman

TSL 2

Gene SUPT3H, Length 1,377 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3H-205ENST00000475057 MACF1Q9UPN3 7388 aaKnown RBP3.2□□□□□ -1.9
SUPT3H-205ENST00000475057 KRTAP10-12P60413 245 aa3.19□□□□□ -1.9
SUPT3H-205ENST00000475057 LCE3CQ5T5A8 94 aa3.19□□□□□ -1.9
SUPT3H-205ENST00000475057 SPRR2GQ9BYE4 73 aa3.13□□□□□ -1.91
SUPT3H-205ENST00000475057 KRTAP6-3Q3LI67 103 aa3.12□□□□□ -1.91
SUPT3H-205ENST00000475057 INE1O15225 51 aa3.09□□□□□ -1.92
SUPT3H-205ENST00000475057 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.07□□□□□ -1.92
SUPT3H-205ENST00000475057 MT2AP02795 61 aa3.06□□□□□ -1.92
SUPT3H-205ENST00000475057 KRTAP20-1Q3LI63 56 aa3.06□□□□□ -1.92
SUPT3H-205ENST00000475057 PRO2289Q9P1D8 64 aa3.06□□□□□ -1.92
SUPT3H-205ENST00000475057 NEBP20929 6669 aa3.06□□□□□ -1.92
SUPT3H-205ENST00000475057 KRTAP19-6Q3LI70 58 aa3.05□□□□□ -1.92
SUPT3H-205ENST00000475057 MT1FP04733 61 aa3.04□□□□□ -1.92
SUPT3H-205ENST00000475057 KRTAP8-1Q8IUC2 63 aa3.03□□□□□ -1.92
SUPT3H-205ENST00000475057 MUC12Q9UKN1 5478 aa3.03□□□□□ -1.93
SUPT3H-205ENST00000475057 KRTAP10-10P60014 251 aa3□□□□□ -1.93
SUPT3H-205ENST00000475057 KRTAP19-8Q3LI54 63 aa2.99□□□□□ -1.93
SUPT3H-205ENST00000475057 LCE3AQ5TA76 89 aa2.99□□□□□ -1.93
SUPT3H-205ENST00000475057 KRTAP10-5P60370 271 aa2.95□□□□□ -1.94
SUPT3H-205ENST00000475057 LCE1EQ5T753 118 aa2.93□□□□□ -1.94
SUPT3H-205ENST00000475057 LCE3EQ5T5B0 92 aa2.92□□□□□ -1.94
SUPT3H-205ENST00000475057 KMT2DO14686 5537 aa2.91□□□□□ -1.94
SUPT3H-205ENST00000475057 KRTAP12-3P60328 96 aa2.91□□□□□ -1.94
SUPT3H-205ENST00000475057 MDN1Q9NU22 5596 aa2.91□□□□□ -1.94
SUPT3H-205ENST00000475057 KRTAP2-3P0C7H8 128 aa2.88□□□□□ -1.95
SUPT3H-205ENST00000475057 KRTAP10-7P60409 375 aaPredicted RBP2.88□□□□□ -1.95
SUPT3H-205ENST00000475057 KRTAP2-4Q9BYR9 128 aa2.88□□□□□ -1.95
SUPT3H-205ENST00000475057 MT1BP07438 61 aa2.87□□□□□ -1.95
SUPT3H-205ENST00000475057 MT1XP80297 61 aa2.87□□□□□ -1.95
SUPT3H-205ENST00000475057 KRTAP5-9P26371 169 aa2.83□□□□□ -1.96
SUPT3H-205ENST00000475057 KRTAP2-1Q9BYU5 128 aa2.77□□□□□ -1.97
SUPT3H-205ENST00000475057 GPR98Q8WXG9 6306 aa2.73□□□□□ -1.97
SUPT3H-205ENST00000475057 SPRR2EP22531 72 aa2.73□□□□□ -1.97
SUPT3H-205ENST00000475057 SPRR2BP35325 72 aa2.73□□□□□ -1.97
SUPT3H-205ENST00000475057 SPRR2AP35326 72 aa2.73□□□□□ -1.97
SUPT3H-205ENST00000475057 KRTAP19-5Q3LI72 72 aa2.7□□□□□ -1.98
SUPT3H-205ENST00000475057 SPRR2FQ96RM1 72 aa2.69□□□□□ -1.98
SUPT3H-205ENST00000475057 KRTAP9-6A8MVA2 160 aa2.66□□□□□ -1.98
SUPT3H-205ENST00000475057 SPRR2DP22532 72 aa2.64□□□□□ -1.99
SUPT3H-205ENST00000475057 KRTAP5-11Q6L8G4 156 aa2.63□□□□□ -1.99
SUPT3H-205ENST00000475057 KRTAP5-4Q6L8H1 288 aa2.62□□□□□ -1.99
SUPT3H-205ENST00000475057 LCE3DQ9BYE3 92 aa2.6□□□□□ -1.99
SUPT3H-205ENST00000475057 KRTAP19-7Q3SYF9 63 aa2.56□□□□□ -2
SUPT3H-205ENST00000475057 KRTAP5-1Q6L8H4 278 aa2.54□□□□□ -2
SUPT3H-205ENST00000475057 KRTAP4-4Q9BYR3 166 aa2.54□□□□□ -2
SUPT3H-205ENST00000475057 DSTQ03001 7570 aaKnown RBP2.52□□□□□ -2.01
SUPT3H-205ENST00000475057 MT1LQ93083 61 aa2.5□□□□□ -2.01
SUPT3H-205ENST00000475057 MT1EP04732 61 aa2.49□□□□□ -2.01
SUPT3H-205ENST00000475057 AHNAK2Q8IVF2 5795 aa2.45□□□□□ -2.02
SUPT3H-205ENST00000475057 HMCN1Q96RW7 5635 aa2.43□□□□□ -2.02
SUPT3H-205ENST00000475057 KRTAP5-10Q6L8G5 202 aa2.42□□□□□ -2.02
SUPT3H-205ENST00000475057 MT1GP13640 62 aa2.39□□□□□ -2.03
SUPT3H-205ENST00000475057 MT4P47944 62 aa2.36□□□□□ -2.03
SUPT3H-205ENST00000475057 KRTAP5-2Q701N4 177 aa2.36□□□□□ -2.03
SUPT3H-205ENST00000475057 KRTAP5-7Q6L8G8 165 aa2.36□□□□□ -2.03
SUPT3H-205ENST00000475057 KRTAP12-4P60329 112 aa2.32□□□□□ -2.04
SUPT3H-205ENST00000475057 MT1MQ8N339 61 aa2.32□□□□□ -2.04
SUPT3H-205ENST00000475057 KRTAP19-3Q7Z4W3 81 aa2.31□□□□□ -2.04
SUPT3H-205ENST00000475057 MT1AP04731 61 aa2.29□□□□□ -2.04
SUPT3H-205ENST00000475057 KRTAP4-3Q9BYR4 195 aa2.25□□□□□ -2.05
SUPT3H-205ENST00000475057 KRTAP5-8O75690 187 aa2.1□□□□□ -2.07
SUPT3H-205ENST00000475057 KRTAP20-2Q3LI61 65 aa2.1□□□□□ -2.07
SUPT3H-205ENST00000475057 AHNAKQ09666 5890 aaKnown RBP2.1□□□□□ -2.07
SUPT3H-205ENST00000475057 KRTAP6-1Q3LI64 71 aa2.1□□□□□ -2.07
SUPT3H-205ENST00000475057 KRTAP5-5Q701N2 237 aaPredicted RBP2.1□□□□□ -2.07
SUPT3H-205ENST00000475057 MUC5ACP98088 5654 aa2.06□□□□□ -2.08
SUPT3H-205ENST00000475057 MUC5BQ9HC84 5762 aaPredicted RBP2.05□□□□□ -2.08
SUPT3H-205ENST00000475057 OBSCNQ5VST9 7968 aa2.03□□□□□ -2.09
SUPT3H-205ENST00000475057 PRM1P04553 51 aa2.02□□□□□ -2.09
SUPT3H-205ENST00000475057 SYNE1Q8NF91 8797 aaKnown RBP2□□□□□ -2.09
SUPT3H-205ENST00000475057 LCE1CQ5T751 118 aa1.98□□□□□ -2.09
SUPT3H-205ENST00000475057 LCE1BQ5T7P3 118 aa1.98□□□□□ -2.09
SUPT3H-205ENST00000475057 KRTAP6-2Q3LI66 62 aa1.93□□□□□ -2.1
SUPT3H-205ENST00000475057 MUC19Q7Z5P9 8384 aa1.48□□□□□ -2.17
SUPT3H-205ENST00000475057 PHGR1C9JFL3 82 aa1.43□□□□□ -2.18
SUPT3H-205ENST00000475057 KRTAP21-2Q3LI59 83 aa1.37□□□□□ -2.19
SUPT3H-205ENST00000475057 KRTAP21-1Q3LI58 79 aa1.35□□□□□ -2.19
SUPT3H-205ENST00000475057 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 731.5 ms