RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 MT1HP80294 61 aa2.33□□□□□ -2.04
RTF1-203ENST00000473214 KRTAP19-2Q3LHN2 52 aa2.33□□□□□ -2.04
RTF1-203ENST00000473214 WFDC13Q8IUB5 93 aa2.33□□□□□ -2.04
RTF1-203ENST00000473214 KRTAP12-4P60329 112 aa2.32□□□□□ -2.04
RTF1-203ENST00000473214 DEFB105AQ8NG35 78 aa2.32□□□□□ -2.04
RTF1-203ENST00000473214 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
RTF1-203ENST00000473214 CLPSL2Q6UWE3 100 aa2.3□□□□□ -2.04
RTF1-203ENST00000473214 LCE3DQ9BYE3 92 aa2.3□□□□□ -2.04
RTF1-203ENST00000473214 SYNE2Q8WXH0 6885 aaKnown RBP2.3□□□□□ -2.04
RTF1-203ENST00000473214 MACF1Q9UPN3 7388 aaKnown RBP2.29□□□□□ -2.04
RTF1-203ENST00000473214 A0A096LNI7 61 aa2.29□□□□□ -2.04
RTF1-203ENST00000473214 SPRR1BP22528 89 aa2.27□□□□□ -2.05
RTF1-203ENST00000473214 A0A0D9SG42 100 aa2.24□□□□□ -2.05
RTF1-203ENST00000473214 FLGP20930 4061 aaPredicted RBP2.23□□□□□ -2.05
RTF1-203ENST00000473214 NEBP20929 6669 aa2.2□□□□□ -2.06
RTF1-203ENST00000473214 KRTAP20-1Q3LI63 56 aa2.19□□□□□ -2.06
RTF1-203ENST00000473214 M0R2T5 61 aa2.16□□□□□ -2.06
RTF1-203ENST00000473214 KRTAP5-7Q6L8G8 165 aa2.16□□□□□ -2.06
RTF1-203ENST00000473214 IGLV5-48A0A075B6I7 105 aa2.14□□□□□ -2.07
RTF1-203ENST00000473214 KRTAP12-3P60328 96 aa2.13□□□□□ -2.07
RTF1-203ENST00000473214 MUC12Q9UKN1 5478 aa2.12□□□□□ -2.07
RTF1-203ENST00000473214 POLR2KP53803 58 aaKnown RBP2.12□□□□□ -2.07
RTF1-203ENST00000473214 RPL39P62891 51 aaKnown RBP2.11□□□□□ -2.07
RTF1-203ENST00000473214 PRLHP81277 87 aa2.11□□□□□ -2.07
RTF1-203ENST00000473214 MT2AP02795 61 aa2.1□□□□□ -2.07
RTF1-203ENST00000473214 MT1FP04733 61 aa2.1□□□□□ -2.07
RTF1-203ENST00000473214 KRTAP19-6Q3LI70 58 aa2.1□□□□□ -2.07
RTF1-203ENST00000473214 M0QY20 66 aa2.07□□□□□ -2.08
RTF1-203ENST00000473214 S4R3F8 94 aa2.07□□□□□ -2.08
RTF1-203ENST00000473214 MMP24-AS1A0A0U1RRL7 71 aa2.06□□□□□ -2.08
RTF1-203ENST00000473214 RPL39LQ96EH5 51 aaKnown RBP2.06□□□□□ -2.08
RTF1-203ENST00000473214 KMT2DO14686 5537 aa2.06□□□□□ -2.08
RTF1-203ENST00000473214 C9orf92A6NGG3 77 aa2.02□□□□□ -2.09
RTF1-203ENST00000473214 KRTAP2-3P0C7H8 128 aa2.02□□□□□ -2.09
RTF1-203ENST00000473214 KRTAP2-4Q9BYR9 128 aa2.02□□□□□ -2.09
RTF1-203ENST00000473214 GPR98Q8WXG9 6306 aa2.01□□□□□ -2.09
RTF1-203ENST00000473214 MDN1Q9NU22 5596 aa2□□□□□ -2.09
RTF1-203ENST00000473214 SPINK1P00995 79 aa1.95□□□□□ -2.1
RTF1-203ENST00000473214 KRTAP21-2Q3LI59 83 aa1.93□□□□□ -2.1
RTF1-203ENST00000473214 KRTAP2-1Q9BYU5 128 aa1.93□□□□□ -2.1
RTF1-203ENST00000473214 RPS29P62273 56 aaKnown RBP1.91□□□□□ -2.1
RTF1-203ENST00000473214 SPRR2EP22531 72 aa1.9□□□□□ -2.11
RTF1-203ENST00000473214 SPRR2BP35325 72 aa1.9□□□□□ -2.11
RTF1-203ENST00000473214 SPRR2AP35326 72 aa1.9□□□□□ -2.11
RTF1-203ENST00000473214 TOMM7Q9P0U1 55 aa1.9□□□□□ -2.11
RTF1-203ENST00000473214 SPRR2FQ96RM1 72 aa1.85□□□□□ -2.11
RTF1-203ENST00000473214 MT1BP07438 61 aa1.84□□□□□ -2.11
RTF1-203ENST00000473214 SPRR2DP22532 72 aa1.83□□□□□ -2.12
RTF1-203ENST00000473214 DSTQ03001 7570 aaKnown RBP1.77□□□□□ -2.13
RTF1-203ENST00000473214 AHNAK2Q8IVF2 5795 aa1.77□□□□□ -2.13
RTF1-203ENST00000473214 KRTAP5-10Q6L8G5 202 aa1.76□□□□□ -2.13
RTF1-203ENST00000473214 HMCN1Q96RW7 5635 aa1.72□□□□□ -2.13
RTF1-203ENST00000473214 KRTAP19-8Q3LI54 63 aa1.72□□□□□ -2.13
RTF1-203ENST00000473214 KRTAP8-1Q8IUC2 63 aa1.7□□□□□ -2.14
RTF1-203ENST00000473214 M0QZ58 72 aa1.67□□□□□ -2.14
RTF1-203ENST00000473214 MT4P47944 62 aa1.66□□□□□ -2.14
RTF1-203ENST00000473214 SPRR2GQ9BYE4 73 aa1.66□□□□□ -2.14
RTF1-203ENST00000473214 MT1XP80297 61 aa1.63□□□□□ -2.15
RTF1-203ENST00000473214 AHNAKQ09666 5890 aaKnown RBP1.53□□□□□ -2.16
RTF1-203ENST00000473214 TNP1P09430 55 aa1.52□□□□□ -2.17
RTF1-203ENST00000473214 MUC5ACP98088 5654 aa1.51□□□□□ -2.17
RTF1-203ENST00000473214 MUC5BQ9HC84 5762 aaPredicted RBP1.51□□□□□ -2.17
RTF1-203ENST00000473214 KRTAP19-3Q7Z4W3 81 aa1.48□□□□□ -2.17
RTF1-203ENST00000473214 PRM1P04553 51 aa1.47□□□□□ -2.17
RTF1-203ENST00000473214 KRTAP20-2Q3LI61 65 aa1.47□□□□□ -2.17
RTF1-203ENST00000473214 KRTAP19-7Q3SYF9 63 aa1.47□□□□□ -2.17
RTF1-203ENST00000473214 MT1EP04732 61 aa1.45□□□□□ -2.18
RTF1-203ENST00000473214 MT1MQ8N339 61 aa1.41□□□□□ -2.18
RTF1-203ENST00000473214 MT1GP13640 62 aa1.37□□□□□ -2.19
RTF1-203ENST00000473214 MT1LQ93083 61 aa1.34□□□□□ -2.19
RTF1-203ENST00000473214 KRTAP19-5Q3LI72 72 aa1.33□□□□□ -2.2
RTF1-203ENST00000473214 SYNE1Q8NF91 8797 aaKnown RBP1.31□□□□□ -2.2
RTF1-203ENST00000473214 KRTAP6-1Q3LI64 71 aa1.17□□□□□ -2.22
RTF1-203ENST00000473214 KRTAP6-2Q3LI66 62 aa1.17□□□□□ -2.22
RTF1-203ENST00000473214 KRTAP21-1Q3LI58 79 aa1.14□□□□□ -2.23
RTF1-203ENST00000473214 MT1AP04731 61 aa1.1□□□□□ -2.23
RTF1-203ENST00000473214 PHGR1C9JFL3 82 aa1.02□□□□□ -2.25
RTF1-203ENST00000473214 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 111.9 ms