RNA–Protein interactions for RNA: ENST00000472564.1

LAMP1-203, Transcript of lysosomal associated membrane protein 1, humanhuman

TSL 2

Gene LAMP1, Length 5,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-203ENST00000472564 FSIP2Q5CZC0 6907 aa5.41□□□□□ -1.54
LAMP1-203ENST00000472564 MT1MQ8N339 61 aa5.39□□□□□ -1.55
LAMP1-203ENST00000472564 RNF213Q63HN8 5207 aa5.38□□□□□ -1.55
LAMP1-203ENST00000472564 HMCN2Q8NDA2 5059 aa5.38□□□□□ -1.55
LAMP1-203ENST00000472564 LOC100996750A0A140TA64 210 aa5.32□□□□□ -1.56
LAMP1-203ENST00000472564 KRTAP19-6Q3LI70 58 aa5.31□□□□□ -1.56
LAMP1-203ENST00000472564 KRTAP19-7Q3SYF9 63 aa5.3□□□□□ -1.56
LAMP1-203ENST00000472564 KRTAP4-3Q9BYR4 195 aa5.3□□□□□ -1.56
LAMP1-203ENST00000472564 MUC2Q02817 5179 aa5.19□□□□□ -1.58
LAMP1-203ENST00000472564 LCE2AQ5TA79 106 aaPredicted RBP5.18□□□□□ -1.58
LAMP1-203ENST00000472564 MT3P25713 68 aa5.16□□□□□ -1.58
LAMP1-203ENST00000472564 PRM1P04553 51 aa5.13□□□□□ -1.59
LAMP1-203ENST00000472564 KRTAP2-3P0C7H8 128 aa5.13□□□□□ -1.59
LAMP1-203ENST00000472564 KRTAP2-4Q9BYR9 128 aa5.13□□□□□ -1.59
LAMP1-203ENST00000472564 KRTAP2-1Q9BYU5 128 aa5.13□□□□□ -1.59
LAMP1-203ENST00000472564 LCE2DQ5TA82 110 aaPredicted RBP5.08□□□□□ -1.6
LAMP1-203ENST00000472564 OBSCNQ5VST9 7968 aa5.05□□□□□ -1.6
LAMP1-203ENST00000472564 KRTAP9-6A8MVA2 160 aa5.01□□□□□ -1.61
LAMP1-203ENST00000472564 MT1AP04731 61 aa5□□□□□ -1.61
LAMP1-203ENST00000472564 KRTAP4-9Q9BYQ8 210 aa4.98□□□□□ -1.61
LAMP1-203ENST00000472564 MT4P47944 62 aa4.95□□□□□ -1.62
LAMP1-203ENST00000472564 KRTAP9-2Q9BYQ4 174 aa4.93□□□□□ -1.62
LAMP1-203ENST00000472564 SYNE2Q8WXH0 6885 aaKnown RBP4.87□□□□□ -1.63
LAMP1-203ENST00000472564 FCGBPQ9Y6R7 5405 aaPredicted RBP4.86□□□□□ -1.63
LAMP1-203ENST00000472564 LCE1DQ5T752 114 aa4.81□□□□□ -1.64
LAMP1-203ENST00000472564 LCE1BQ5T7P3 118 aa4.8□□□□□ -1.64
LAMP1-203ENST00000472564 KRTAP6-1Q3LI64 71 aa4.75□□□□□ -1.65
LAMP1-203ENST00000472564 USH2AO75445 5202 aa4.74□□□□□ -1.65
LAMP1-203ENST00000472564 LCE5AQ5TCM9 118 aa4.72□□□□□ -1.65
LAMP1-203ENST00000472564 DSTQ03001 7570 aaKnown RBP4.7□□□□□ -1.66
LAMP1-203ENST00000472564 LCE1AQ5T7P2 110 aa4.66□□□□□ -1.66
LAMP1-203ENST00000472564 KRTAP6-2Q3LI66 62 aa4.61□□□□□ -1.67
LAMP1-203ENST00000472564 KRTAP9-4Q9BYQ2 154 aa4.58□□□□□ -1.68
LAMP1-203ENST00000472564 KMT2DO14686 5537 aa4.54□□□□□ -1.68
LAMP1-203ENST00000472564 KRTAP9-6A0A140TA67 174 aa4.5□□□□□ -1.69
LAMP1-203ENST00000472564 KRTAP9-7A8MTY7 169 aa4.5□□□□□ -1.69
LAMP1-203ENST00000472564 KRTAP6-3Q3LI67 103 aa4.46□□□□□ -1.7
LAMP1-203ENST00000472564 MACF1Q9UPN3 7388 aaKnown RBP4.34□□□□□ -1.72
LAMP1-203ENST00000472564 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.3□□□□□ -1.72
LAMP1-203ENST00000472564 LCE4AQ5TA78 99 aa4.3□□□□□ -1.72
LAMP1-203ENST00000472564 MUC12Q9UKN1 5478 aa4.29□□□□□ -1.72
LAMP1-203ENST00000472564 KRTAP20-1Q3LI63 56 aa4.28□□□□□ -1.72
LAMP1-203ENST00000472564 SSPOA2VEC9 5147 aa4.19□□□□□ -1.74
LAMP1-203ENST00000472564 KRTAP2-2Q9BYT5 123 aa4.16□□□□□ -1.74
LAMP1-203ENST00000472564 MUC19Q7Z5P9 8384 aa4.09□□□□□ -1.75
LAMP1-203ENST00000472564 MDN1Q9NU22 5596 aa4.06□□□□□ -1.76
LAMP1-203ENST00000472564 KRTAP5-9P26371 169 aa4.01□□□□□ -1.77
LAMP1-203ENST00000472564 LCE1CQ5T751 118 aa3.92□□□□□ -1.78
LAMP1-203ENST00000472564 LCE1EQ5T753 118 aa3.92□□□□□ -1.78
LAMP1-203ENST00000472564 LCE1FQ5T754 118 aa3.92□□□□□ -1.78
LAMP1-203ENST00000472564 NEBP20929 6669 aa3.88□□□□□ -1.79
LAMP1-203ENST00000472564 KRTAP4-6Q9BYQ5 205 aa3.86□□□□□ -1.79
LAMP1-203ENST00000472564 KRTAP4-11Q9BYQ6 195 aa3.8□□□□□ -1.8
LAMP1-203ENST00000472564 KRTAP20-2Q3LI61 65 aa3.77□□□□□ -1.81
LAMP1-203ENST00000472564 KRTAP5-5Q701N2 237 aaPredicted RBP3.73□□□□□ -1.81
LAMP1-203ENST00000472564 KRTAP9-9Q9BYP9 154 aa3.61□□□□□ -1.83
LAMP1-203ENST00000472564 GPR98Q8WXG9 6306 aa3.46□□□□□ -1.86
LAMP1-203ENST00000472564 KRTAP4-4Q9BYR3 166 aa3.44□□□□□ -1.86
LAMP1-203ENST00000472564 KRTAP5-4Q6L8H1 288 aa3.42□□□□□ -1.86
LAMP1-203ENST00000472564 MUC5ACP98088 5654 aa3.4□□□□□ -1.86
LAMP1-203ENST00000472564 KRTAP4-12Q9BQ66 201 aa3.33□□□□□ -1.88
LAMP1-203ENST00000472564 KRTAP4-2Q9BYR5 136 aa3.33□□□□□ -1.88
LAMP1-203ENST00000472564 HMCN1Q96RW7 5635 aa3.3□□□□□ -1.88
LAMP1-203ENST00000472564 AHNAK2Q8IVF2 5795 aa3.07□□□□□ -1.92
LAMP1-203ENST00000472564 KRTAP5-3Q6L8H2 238 aa3.01□□□□□ -1.93
LAMP1-203ENST00000472564 KRTAP5-10Q6L8G5 202 aa2.95□□□□□ -1.94
LAMP1-203ENST00000472564 KRTAP5-2Q701N4 177 aa2.87□□□□□ -1.95
LAMP1-203ENST00000472564 KRTAP5-8O75690 187 aa2.77□□□□□ -1.97
LAMP1-203ENST00000472564 MUC5BQ9HC84 5762 aaPredicted RBP2.62□□□□□ -1.99
LAMP1-203ENST00000472564 KRTAP5-1Q6L8H4 278 aa2.56□□□□□ -2
LAMP1-203ENST00000472564 AHNAKQ09666 5890 aaKnown RBP2.55□□□□□ -2
LAMP1-203ENST00000472564 KRTAP5-11Q6L8G4 156 aa2.54□□□□□ -2
LAMP1-203ENST00000472564 KRTAP21-2Q3LI59 83 aa2.51□□□□□ -2.01
LAMP1-203ENST00000472564 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.32□□□□□ -2.04
LAMP1-203ENST00000472564 KRTAP21-1Q3LI58 79 aa2.32□□□□□ -2.04
LAMP1-203ENST00000472564 PHGR1C9JFL3 82 aa2.29□□□□□ -2.04
LAMP1-203ENST00000472564 KRTAP5-7Q6L8G8 165 aa2□□□□□ -2.09
LAMP1-203ENST00000472564 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 100.6 ms