RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 KRTAP6-3Q3LI67 103 aa5.87□□□□□ -1.47
COL4A5-203ENST00000470339 LCE3AQ5TA76 89 aa5.84□□□□□ -1.47
COL4A5-203ENST00000470339 KRTAP8-1Q8IUC2 63 aa5.77□□□□□ -1.49
COL4A5-203ENST00000470339 KRTAP5-3Q6L8H2 238 aa5.76□□□□□ -1.49
COL4A5-203ENST00000470339 LCE4AQ5TA78 99 aa5.75□□□□□ -1.49
COL4A5-203ENST00000470339 A0A0A0MQY5 61 aa5.7□□□□□ -1.5
COL4A5-203ENST00000470339 KMT2DO14686 5537 aa5.67□□□□□ -1.5
COL4A5-203ENST00000470339 KRTAP5-9P26371 169 aa5.65□□□□□ -1.5
COL4A5-203ENST00000470339 MUC12Q9UKN1 5478 aa5.64□□□□□ -1.51
COL4A5-203ENST00000470339 KRTAP12-3P60328 96 aa5.64□□□□□ -1.51
COL4A5-203ENST00000470339 KRTAP19-5Q3LI72 72 aa5.64□□□□□ -1.51
COL4A5-203ENST00000470339 KRTAP19-7Q3SYF9 63 aa5.61□□□□□ -1.51
COL4A5-203ENST00000470339 NEBP20929 6669 aa5.6□□□□□ -1.51
COL4A5-203ENST00000470339 LCE5AQ5TCM9 118 aa5.59□□□□□ -1.51
COL4A5-203ENST00000470339 MT1EP04732 61 aa5.53□□□□□ -1.52
COL4A5-203ENST00000470339 MDN1Q9NU22 5596 aa5.52□□□□□ -1.53
COL4A5-203ENST00000470339 KRTAP15-1Q3LI76 137 aa5.51□□□□□ -1.53
COL4A5-203ENST00000470339 SPRR2FQ96RM1 72 aa5.49□□□□□ -1.53
COL4A5-203ENST00000470339 KRTAP19-4Q3LI73 84 aa5.44□□□□□ -1.54
COL4A5-203ENST00000470339 KRTAP20-1Q3LI63 56 aa5.43□□□□□ -1.54
COL4A5-203ENST00000470339 MT1LQ93083 61 aa5.39□□□□□ -1.55
COL4A5-203ENST00000470339 KRTAP19-3Q7Z4W3 81 aa5.35□□□□□ -1.55
COL4A5-203ENST00000470339 MT1GP13640 62 aa5.32□□□□□ -1.56
COL4A5-203ENST00000470339 LCE1AQ5T7P2 110 aa5.29□□□□□ -1.56
COL4A5-203ENST00000470339 KRTAP2-3P0C7H8 128 aa5.27□□□□□ -1.57
COL4A5-203ENST00000470339 LCE3CQ5T5A8 94 aa5.27□□□□□ -1.57
COL4A5-203ENST00000470339 KRTAP2-4Q9BYR9 128 aa5.27□□□□□ -1.57
COL4A5-203ENST00000470339 SPRR2EP22531 72 aa5.26□□□□□ -1.57
COL4A5-203ENST00000470339 SPRR2BP35325 72 aa5.26□□□□□ -1.57
COL4A5-203ENST00000470339 SPRR2AP35326 72 aa5.26□□□□□ -1.57
COL4A5-203ENST00000470339 MT1MQ8N339 61 aa5.21□□□□□ -1.58
COL4A5-203ENST00000470339 SPRR5A0A1B0GTR4 108 aa5.16□□□□□ -1.58
COL4A5-203ENST00000470339 KRTAP2-2Q9BYT5 123 aa5.1□□□□□ -1.59
COL4A5-203ENST00000470339 KRTAP2-1Q9BYU5 128 aa5.1□□□□□ -1.59
COL4A5-203ENST00000470339 SPRR2DP22532 72 aa5.09□□□□□ -1.59
COL4A5-203ENST00000470339 KRTAP4-3Q9BYR4 195 aa5.04□□□□□ -1.6
COL4A5-203ENST00000470339 KRTAP9-6A8MVA2 160 aa4.93□□□□□ -1.62
COL4A5-203ENST00000470339 LUZP6Q538Z0 58 aa4.91□□□□□ -1.62
COL4A5-203ENST00000470339 GPR98Q8WXG9 6306 aa4.87□□□□□ -1.63
COL4A5-203ENST00000470339 DSTQ03001 7570 aaKnown RBP4.86□□□□□ -1.63
COL4A5-203ENST00000470339 KRTAP5-5Q701N2 237 aaPredicted RBP4.73□□□□□ -1.65
COL4A5-203ENST00000470339 NDUFAF8A1L188 74 aa4.63□□□□□ -1.67
COL4A5-203ENST00000470339 MT1AP04731 61 aa4.61□□□□□ -1.67
COL4A5-203ENST00000470339 KRTAP5-4Q6L8H1 288 aa4.6□□□□□ -1.67
COL4A5-203ENST00000470339 KRTAP6-1Q3LI64 71 aa4.52□□□□□ -1.69
COL4A5-203ENST00000470339 HMCN1Q96RW7 5635 aa4.51□□□□□ -1.69
COL4A5-203ENST00000470339 KRTAP12-4P60329 112 aa4.45□□□□□ -1.7
COL4A5-203ENST00000470339 MT4P47944 62 aa4.41□□□□□ -1.7
COL4A5-203ENST00000470339 SYNE1Q8NF91 8797 aaKnown RBP4.37□□□□□ -1.71
COL4A5-203ENST00000470339 AHNAK2Q8IVF2 5795 aa4.28□□□□□ -1.72
COL4A5-203ENST00000470339 KRTAP20-2Q3LI61 65 aa4.27□□□□□ -1.73
COL4A5-203ENST00000470339 KRTAP5-10Q6L8G5 202 aa4.25□□□□□ -1.73
COL4A5-203ENST00000470339 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.21□□□□□ -1.74
COL4A5-203ENST00000470339 MT3P25713 68 aa4.2□□□□□ -1.74
COL4A5-203ENST00000470339 KRTAP6-2Q3LI66 62 aa4.19□□□□□ -1.74
COL4A5-203ENST00000470339 KRTAP5-2Q701N4 177 aa4.15□□□□□ -1.75
COL4A5-203ENST00000470339 KRTAP5-7Q6L8G8 165 aa4.12□□□□□ -1.75
COL4A5-203ENST00000470339 KRTAP5-11Q6L8G4 156 aa3.98□□□□□ -1.77
COL4A5-203ENST00000470339 LCE3DQ9BYE3 92 aa3.94□□□□□ -1.78
COL4A5-203ENST00000470339 INE1O15225 51 aa3.91□□□□□ -1.78
COL4A5-203ENST00000470339 LCE3EQ5T5B0 92 aa3.82□□□□□ -1.8
COL4A5-203ENST00000470339 KRTAP5-8O75690 187 aa3.74□□□□□ -1.81
COL4A5-203ENST00000470339 OBSCNQ5VST9 7968 aa3.72□□□□□ -1.81
COL4A5-203ENST00000470339 AHNAKQ09666 5890 aaKnown RBP3.71□□□□□ -1.82
COL4A5-203ENST00000470339 LCE1EQ5T753 118 aa3.71□□□□□ -1.82
COL4A5-203ENST00000470339 KRTAP5-1Q6L8H4 278 aa3.62□□□□□ -1.83
COL4A5-203ENST00000470339 MUC5ACP98088 5654 aa3.59□□□□□ -1.83
COL4A5-203ENST00000470339 MUC5BQ9HC84 5762 aaPredicted RBP3.57□□□□□ -1.84
COL4A5-203ENST00000470339 KRTAP4-4Q9BYR3 166 aa3.51□□□□□ -1.85
COL4A5-203ENST00000470339 LCE1FQ5T754 118 aa3.5□□□□□ -1.85
COL4A5-203ENST00000470339 LCE1CQ5T751 118 aa3.44□□□□□ -1.86
COL4A5-203ENST00000470339 LCE1BQ5T7P3 118 aa3.44□□□□□ -1.86
COL4A5-203ENST00000470339 PRM1P04553 51 aa3.22□□□□□ -1.89
COL4A5-203ENST00000470339 KRTAP21-2Q3LI59 83 aa2.99□□□□□ -1.93
COL4A5-203ENST00000470339 PHGR1C9JFL3 82 aa2.6□□□□□ -1.99
COL4A5-203ENST00000470339 MUC19Q7Z5P9 8384 aa2.26□□□□□ -2.05
COL4A5-203ENST00000470339 KRTAP21-1Q3LI58 79 aa1.98□□□□□ -2.09
COL4A5-203ENST00000470339 MUC16Q8WXI7 14507 aa1.66□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 5.9 ms