RNA–Protein interactions for RNA: ENST00000469560.1

PMPCB-207, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 1,615 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-207ENST00000469560 KRTAP12-2P59991 146 aa3.01□□□□□ -1.93
PMPCB-207ENST00000469560 BRK1Q8WUW1 75 aa3.01□□□□□ -1.93
PMPCB-207ENST00000469560 UQCR11O14957 56 aa3□□□□□ -1.93
PMPCB-207ENST00000469560 MIR22HGQ0VDD5 57 aa2.98□□□□□ -1.93
PMPCB-207ENST00000469560 MT1XP80297 61 aa2.97□□□□□ -1.93
PMPCB-207ENST00000469560 A6NN06 94 aa2.96□□□□□ -1.94
PMPCB-207ENST00000469560 KRTAP10-5P60370 271 aa2.96□□□□□ -1.94
PMPCB-207ENST00000469560 KRTAP19-6Q3LI70 58 aa2.94□□□□□ -1.94
PMPCB-207ENST00000469560 CDC42SE1Q9NRR8 79 aa2.93□□□□□ -1.94
PMPCB-207ENST00000469560 SPINT4Q6UDR6 99 aa2.93□□□□□ -1.94
PMPCB-207ENST00000469560 FCGBPQ9Y6R7 5405 aaPredicted RBP2.92□□□□□ -1.94
PMPCB-207ENST00000469560 PLAC4Q8WY50 150 aa2.89□□□□□ -1.95
PMPCB-207ENST00000469560 C10orf95Q9H7T3 257 aa2.89□□□□□ -1.95
PMPCB-207ENST00000469560 KRTAP5-8O75690 187 aa2.88□□□□□ -1.95
PMPCB-207ENST00000469560 HMCN1Q96RW7 5635 aa2.86□□□□□ -1.95
PMPCB-207ENST00000469560 LCE3CQ5T5A8 94 aa2.86□□□□□ -1.95
PMPCB-207ENST00000469560 KRTAP10-12P60413 245 aa2.85□□□□□ -1.95
PMPCB-207ENST00000469560 KRTAP25-1Q3LHN0 102 aa2.84□□□□□ -1.95
PMPCB-207ENST00000469560 KMT2DO14686 5537 aa2.82□□□□□ -1.96
PMPCB-207ENST00000469560 KTN1-AS1Q86SY8 53 aa2.79□□□□□ -1.96
PMPCB-207ENST00000469560 PRO2289Q9P1D8 64 aa2.76□□□□□ -1.97
PMPCB-207ENST00000469560 MACF1Q9UPN3 7388 aaKnown RBP2.75□□□□□ -1.97
PMPCB-207ENST00000469560 ROMO1P60602 79 aa2.73□□□□□ -1.97
PMPCB-207ENST00000469560 KRTAP9-6A8MVA2 160 aa2.71□□□□□ -1.97
PMPCB-207ENST00000469560 LCE3AQ5TA76 89 aa2.71□□□□□ -1.98
PMPCB-207ENST00000469560 SYNE2Q8WXH0 6885 aaKnown RBP2.69□□□□□ -1.98
PMPCB-207ENST00000469560 TNP1P09430 55 aa2.68□□□□□ -1.98
PMPCB-207ENST00000469560 KRTAP19-7Q3SYF9 63 aa2.67□□□□□ -1.98
PMPCB-207ENST00000469560 KRTAP20-1Q3LI63 56 aa2.65□□□□□ -1.98
PMPCB-207ENST00000469560 KRTAP6-3Q3LI67 103 aa2.64□□□□□ -1.99
PMPCB-207ENST00000469560 KRTAP19-5Q3LI72 72 aa2.64□□□□□ -1.99
PMPCB-207ENST00000469560 LCE3EQ5T5B0 92 aa2.62□□□□□ -1.99
PMPCB-207ENST00000469560 KRTAP8-1Q8IUC2 63 aa2.62□□□□□ -1.99
PMPCB-207ENST00000469560 NEBP20929 6669 aa2.61□□□□□ -1.99
PMPCB-207ENST00000469560 MUC12Q9UKN1 5478 aa2.61□□□□□ -1.99
PMPCB-207ENST00000469560 MT1EP04732 61 aa2.59□□□□□ -1.99
PMPCB-207ENST00000469560 KRTAP12-3P60328 96 aa2.56□□□□□ -2
PMPCB-207ENST00000469560 SPRR2FQ96RM1 72 aa2.56□□□□□ -2
PMPCB-207ENST00000469560 MDN1Q9NU22 5596 aa2.54□□□□□ -2
PMPCB-207ENST00000469560 MT1LQ93083 61 aa2.52□□□□□ -2.01
PMPCB-207ENST00000469560 PP632Q6XCG6 107 aa2.5□□□□□ -2.01
PMPCB-207ENST00000469560 KRTAP2-3P0C7H8 128 aa2.47□□□□□ -2.01
PMPCB-207ENST00000469560 KRTAP19-3Q7Z4W3 81 aa2.47□□□□□ -2.01
PMPCB-207ENST00000469560 KRTAP2-4Q9BYR9 128 aa2.47□□□□□ -2.01
PMPCB-207ENST00000469560 SPRR5A0A1B0GTR4 108 aa2.46□□□□□ -2.02
PMPCB-207ENST00000469560 SPRR2EP22531 72 aa2.46□□□□□ -2.02
PMPCB-207ENST00000469560 SPRR2BP35325 72 aa2.46□□□□□ -2.02
PMPCB-207ENST00000469560 SPRR2AP35326 72 aa2.46□□□□□ -2.02
PMPCB-207ENST00000469560 MT1MQ8N339 61 aa2.45□□□□□ -2.02
PMPCB-207ENST00000469560 GPR98Q8WXG9 6306 aa2.43□□□□□ -2.02
PMPCB-207ENST00000469560 MT1GP13640 62 aa2.42□□□□□ -2.02
PMPCB-207ENST00000469560 KRTAP2-1Q9BYU5 128 aa2.37□□□□□ -2.03
PMPCB-207ENST00000469560 SPRR2DP22532 72 aa2.35□□□□□ -2.03
PMPCB-207ENST00000469560 DSTQ03001 7570 aaKnown RBP2.35□□□□□ -2.03
PMPCB-207ENST00000469560 LCE3DQ9BYE3 92 aa2.31□□□□□ -2.04
PMPCB-207ENST00000469560 KRTAP5-5Q701N2 237 aaPredicted RBP2.25□□□□□ -2.05
PMPCB-207ENST00000469560 KRTAP6-1Q3LI64 71 aa2.15□□□□□ -2.07
PMPCB-207ENST00000469560 SYNE1Q8NF91 8797 aaKnown RBP2.13□□□□□ -2.07
PMPCB-207ENST00000469560 MT1AP04731 61 aa2.12□□□□□ -2.07
PMPCB-207ENST00000469560 MT4P47944 62 aa2.08□□□□□ -2.08
PMPCB-207ENST00000469560 AHNAK2Q8IVF2 5795 aa2.07□□□□□ -2.08
PMPCB-207ENST00000469560 INE1O15225 51 aa2.06□□□□□ -2.08
PMPCB-207ENST00000469560 LCE1CQ5T751 118 aa2.05□□□□□ -2.08
PMPCB-207ENST00000469560 LCE1BQ5T7P3 118 aa2.05□□□□□ -2.08
PMPCB-207ENST00000469560 KRTAP5-10Q6L8G5 202 aa2.03□□□□□ -2.08
PMPCB-207ENST00000469560 KRTAP5-7Q6L8G8 165 aa2.03□□□□□ -2.08
PMPCB-207ENST00000469560 KRTAP20-2Q3LI61 65 aa2.02□□□□□ -2.09
PMPCB-207ENST00000469560 KRTAP12-4P60329 112 aa1.98□□□□□ -2.09
PMPCB-207ENST00000469560 KRTAP6-2Q3LI66 62 aa1.98□□□□□ -2.09
PMPCB-207ENST00000469560 AHNAKQ09666 5890 aaKnown RBP1.87□□□□□ -2.11
PMPCB-207ENST00000469560 MUC19Q7Z5P9 8384 aa1.82□□□□□ -2.12
PMPCB-207ENST00000469560 MUC5ACP98088 5654 aa1.79□□□□□ -2.12
PMPCB-207ENST00000469560 MUC5BQ9HC84 5762 aaPredicted RBP1.78□□□□□ -2.12
PMPCB-207ENST00000469560 KRTAP21-2Q3LI59 83 aa1.52□□□□□ -2.17
PMPCB-207ENST00000469560 PRM1P04553 51 aa1.45□□□□□ -2.18
PMPCB-207ENST00000469560 PHGR1C9JFL3 82 aa1.25□□□□□ -2.21
PMPCB-207ENST00000469560 KRTAP21-1Q3LI58 79 aa0.99□□□□□ -2.25
PMPCB-207ENST00000469560 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 133.4 ms