RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 MACF1Q9UPN3 7388 aaKnown RBP4.35□□□□□ -1.71
USP11-206ENST00000469080 LCE3CQ5T5A8 94 aa4.35□□□□□ -1.71
USP11-206ENST00000469080 KRTAP4-3Q9BYR4 195 aa4.32□□□□□ -1.72
USP11-206ENST00000469080 SPRR2FQ96RM1 72 aa4.31□□□□□ -1.72
USP11-206ENST00000469080 KRTAP19-6Q3LI70 58 aa4.27□□□□□ -1.73
USP11-206ENST00000469080 KRTAP19-7Q3SYF9 63 aa4.27□□□□□ -1.73
USP11-206ENST00000469080 LOC100996750A0A140TA64 210 aa4.24□□□□□ -1.73
USP11-206ENST00000469080 MT1GP13640 62 aa4.21□□□□□ -1.74
USP11-206ENST00000469080 KRTAP9-6A8MVA2 160 aa4.2□□□□□ -1.74
USP11-206ENST00000469080 KRTAP2-3P0C7H8 128 aa4.19□□□□□ -1.74
USP11-206ENST00000469080 KRTAP2-4Q9BYR9 128 aa4.19□□□□□ -1.74
USP11-206ENST00000469080 KRTAP2-1Q9BYU5 128 aa4.19□□□□□ -1.74
USP11-206ENST00000469080 MDN1Q9NU22 5596 aa4.18□□□□□ -1.74
USP11-206ENST00000469080 MT1EP04732 61 aa4.18□□□□□ -1.74
USP11-206ENST00000469080 MT1LQ93083 61 aa4.17□□□□□ -1.74
USP11-206ENST00000469080 KRTAP12-4P60329 112 aa4.14□□□□□ -1.75
USP11-206ENST00000469080 KRTAP9-6A0A140TA67 174 aa3.99□□□□□ -1.77
USP11-206ENST00000469080 KRTAP19-3Q7Z4W3 81 aa3.98□□□□□ -1.77
USP11-206ENST00000469080 LCE3BQ5TA77 95 aa3.96□□□□□ -1.78
USP11-206ENST00000469080 MT1MQ8N339 61 aa3.96□□□□□ -1.78
USP11-206ENST00000469080 SPRR2EP22531 72 aa3.91□□□□□ -1.78
USP11-206ENST00000469080 SPRR2BP35325 72 aa3.91□□□□□ -1.78
USP11-206ENST00000469080 SPRR2AP35326 72 aa3.91□□□□□ -1.78
USP11-206ENST00000469080 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.87□□□□□ -1.79
USP11-206ENST00000469080 KRTAP4-9Q9BYQ8 210 aa3.86□□□□□ -1.79
USP11-206ENST00000469080 LCE1AQ5T7P2 110 aa3.85□□□□□ -1.79
USP11-206ENST00000469080 KRTAP6-3Q3LI67 103 aa3.8□□□□□ -1.8
USP11-206ENST00000469080 KRTAP2-2Q9BYT5 123 aa3.79□□□□□ -1.8
USP11-206ENST00000469080 PRM1P04553 51 aa3.76□□□□□ -1.81
USP11-206ENST00000469080 LCE5AQ5TCM9 118 aa3.74□□□□□ -1.81
USP11-206ENST00000469080 SPRR2DP22532 72 aa3.72□□□□□ -1.81
USP11-206ENST00000469080 LCE1EQ5T753 118 aa3.72□□□□□ -1.81
USP11-206ENST00000469080 KRTAP9-7A8MTY7 169 aa3.7□□□□□ -1.82
USP11-206ENST00000469080 KRTAP5-9P26371 169 aa3.7□□□□□ -1.82
USP11-206ENST00000469080 KRTAP6-1Q3LI64 71 aa3.65□□□□□ -1.82
USP11-206ENST00000469080 KRTAP19-4Q3LI73 84 aa3.56□□□□□ -1.84
USP11-206ENST00000469080 NEBP20929 6669 aa3.55□□□□□ -1.84
USP11-206ENST00000469080 LCE1DQ5T752 114 aa3.52□□□□□ -1.85
USP11-206ENST00000469080 MT4P47944 62 aa3.52□□□□□ -1.85
USP11-206ENST00000469080 LCE3EQ5T5B0 92 aa3.5□□□□□ -1.85
USP11-206ENST00000469080 LCE3DQ9BYE3 92 aa3.5□□□□□ -1.85
USP11-206ENST00000469080 KRTAP5-5Q701N2 237 aaPredicted RBP3.46□□□□□ -1.85
USP11-206ENST00000469080 MT1AP04731 61 aa3.44□□□□□ -1.86
USP11-206ENST00000469080 KRTAP6-2Q3LI66 62 aa3.39□□□□□ -1.87
USP11-206ENST00000469080 KRTAP4-6Q9BYQ5 205 aa3.27□□□□□ -1.89
USP11-206ENST00000469080 KRTAP9-4Q9BYQ2 154 aa3.25□□□□□ -1.89
USP11-206ENST00000469080 LCE1FQ5T754 118 aa3.24□□□□□ -1.89
USP11-206ENST00000469080 KRTAP20-1Q3LI63 56 aa3.23□□□□□ -1.89
USP11-206ENST00000469080 MT3P25713 68 aa3.23□□□□□ -1.89
USP11-206ENST00000469080 LCE4AQ5TA78 99 aa3.19□□□□□ -1.9
USP11-206ENST00000469080 HMCN1Q96RW7 5635 aa3.13□□□□□ -1.91
USP11-206ENST00000469080 MUC19Q7Z5P9 8384 aa3.1□□□□□ -1.91
USP11-206ENST00000469080 LCE1BQ5T7P3 118 aa3.07□□□□□ -1.92
USP11-206ENST00000469080 KRTAP5-4Q6L8H1 288 aa3.06□□□□□ -1.92
USP11-206ENST00000469080 KRTAP9-9Q9BYP9 154 aa3.02□□□□□ -1.93
USP11-206ENST00000469080 MUC5ACP98088 5654 aa3.02□□□□□ -1.93
USP11-206ENST00000469080 KRTAP20-2Q3LI61 65 aa2.99□□□□□ -1.93
USP11-206ENST00000469080 KRTAP4-11Q9BYQ6 195 aa2.83□□□□□ -1.96
USP11-206ENST00000469080 KRTAP5-3Q6L8H2 238 aa2.81□□□□□ -1.96
USP11-206ENST00000469080 KRTAP5-2Q701N4 177 aa2.76□□□□□ -1.97
USP11-206ENST00000469080 KRTAP4-12Q9BQ66 201 aa2.67□□□□□ -1.98
USP11-206ENST00000469080 AHNAK2Q8IVF2 5795 aa2.66□□□□□ -1.98
USP11-206ENST00000469080 MUC5BQ9HC84 5762 aaPredicted RBP2.63□□□□□ -1.99
USP11-206ENST00000469080 KRTAP4-4Q9BYR3 166 aa2.57□□□□□ -2
USP11-206ENST00000469080 GPR98Q8WXG9 6306 aa2.54□□□□□ -2
USP11-206ENST00000469080 KRTAP4-2Q9BYR5 136 aa2.52□□□□□ -2.01
USP11-206ENST00000469080 KRTAP5-1Q6L8H4 278 aa2.48□□□□□ -2.01
USP11-206ENST00000469080 KRTAP5-8O75690 187 aa2.48□□□□□ -2.01
USP11-206ENST00000469080 LCE1CQ5T751 118 aa2.47□□□□□ -2.01
USP11-206ENST00000469080 KRTAP5-10Q6L8G5 202 aa2.44□□□□□ -2.02
USP11-206ENST00000469080 KRTAP21-1Q3LI58 79 aa2.26□□□□□ -2.05
USP11-206ENST00000469080 KRTAP5-7Q6L8G8 165 aa2.21□□□□□ -2.06
USP11-206ENST00000469080 KRTAP21-2Q3LI59 83 aa2.18□□□□□ -2.06
USP11-206ENST00000469080 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.07□□□□□ -2.08
USP11-206ENST00000469080 AHNAKQ09666 5890 aaKnown RBP2.06□□□□□ -2.08
USP11-206ENST00000469080 KRTAP5-11Q6L8G4 156 aa2.01□□□□□ -2.09
USP11-206ENST00000469080 PHGR1C9JFL3 82 aa1.77□□□□□ -2.13
USP11-206ENST00000469080 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 71.1 ms