RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 I3L3M4 83 aa0.49□□□□□ -2.33
LSM5-209ENST00000468872 SFTA3P0C7M3 94 aa0.49□□□□□ -2.33
LSM5-209ENST00000468872 COX8AP10176 69 aa0.49□□□□□ -2.33
LSM5-209ENST00000468872 NDUFB1O75438 58 aa0.48□□□□□ -2.33
LSM5-209ENST00000468872 DEFB105AQ8NG35 78 aa0.48□□□□□ -2.33
LSM5-209ENST00000468872 IFI27P40305 119 aaPredicted RBP0.47□□□□□ -2.33
LSM5-209ENST00000468872 RPS27P42677 84 aaKnown RBP0.47□□□□□ -2.33
LSM5-209ENST00000468872 KLK9Q2XQG4 91 aa0.47□□□□□ -2.33
LSM5-209ENST00000468872 RPL39P5Q59GN2 51 aa0.47□□□□□ -2.33
LSM5-209ENST00000468872 SMCO4Q9NRQ5 59 aa0.47□□□□□ -2.33
LSM5-209ENST00000468872 A8MTW9 85 aa0.46□□□□□ -2.34
LSM5-209ENST00000468872 UMAD1C9J7I0 102 aa0.46□□□□□ -2.34
LSM5-209ENST00000468872 RPS29P62273 56 aaKnown RBP0.46□□□□□ -2.34
LSM5-209ENST00000468872 A0A087WXM4 84 aa0.45□□□□□ -2.34
LSM5-209ENST00000468872 SPINK1P00995 79 aa0.45□□□□□ -2.34
LSM5-209ENST00000468872 PRCDQ00LT1 54 aa0.45□□□□□ -2.34
LSM5-209ENST00000468872 NREPQ16612 68 aa0.45□□□□□ -2.34
LSM5-209ENST00000468872 H1FX-AS1Q4G0G2 97 aa0.45□□□□□ -2.34
LSM5-209ENST00000468872 SPINK4O60575 86 aa0.44□□□□□ -2.34
LSM5-209ENST00000468872 CLPSL2Q6UWE3 100 aa0.44□□□□□ -2.34
LSM5-209ENST00000468872 PDCD5O14737 125 aa0.42□□□□□ -2.34
LSM5-209ENST00000468872 MT1LQ93083 61 aa0.42□□□□□ -2.34
LSM5-209ENST00000468872 K7EIM0 57 aa0.41□□□□□ -2.34
LSM5-209ENST00000468872 RPL38P63173 70 aaKnown RBP0.4□□□□□ -2.35
LSM5-209ENST00000468872 KRTAP6-1Q3LI64 71 aa0.4□□□□□ -2.35
LSM5-209ENST00000468872 FXYD6Q9H0Q3 95 aa0.4□□□□□ -2.35
LSM5-209ENST00000468872 PRM1P04553 51 aa0.36□□□□□ -2.35
LSM5-209ENST00000468872 A0A087WWC5 75 aa0.35□□□□□ -2.35
LSM5-209ENST00000468872 H3BVH4 76 aa0.35□□□□□ -2.35
LSM5-209ENST00000468872 WFDC13Q8IUB5 93 aa0.35□□□□□ -2.35
LSM5-209ENST00000468872 CDKN2A-AS1Q9UH64 79 aa0.35□□□□□ -2.35
LSM5-209ENST00000468872 WT1-ASQ06250 92 aa0.34□□□□□ -2.36
LSM5-209ENST00000468872 KRTAP19-5Q3LI72 72 aa0.34□□□□□ -2.36
LSM5-209ENST00000468872 MT1AP04731 61 aa0.32□□□□□ -2.36
LSM5-209ENST00000468872 PRLHP81277 87 aa0.3□□□□□ -2.36
LSM5-209ENST00000468872 KCNQ1DNQ9H478 68 aa0.3□□□□□ -2.36
LSM5-209ENST00000468872 ATXN8Q156A1 80 aa0.29□□□□□ -2.36
LSM5-209ENST00000468872 SMIM31A0A1B0GVY4 71 aa0.26□□□□□ -2.37
LSM5-209ENST00000468872 LINC00158P58513 81 aa0.26□□□□□ -2.37
LSM5-209ENST00000468872 SNRPGP62308 76 aaKnown RBP0.25□□□□□ -2.37
LSM5-209ENST00000468872 LINC01590Q5TEZ4 76 aa0.25□□□□□ -2.37
LSM5-209ENST00000468872 ABRACLQ9P1F3 81 aa0.25□□□□□ -2.37
LSM5-209ENST00000468872 C3orf79P0CE67 100 aa0.24□□□□□ -2.37
LSM5-209ENST00000468872 CRIP1P50238 77 aa0.23□□□□□ -2.37
LSM5-209ENST00000468872 UBL5Q9BZL1 73 aa0.23□□□□□ -2.37
LSM5-209ENST00000468872 GNG13Q9P2W3 67 aa0.22□□□□□ -2.37
LSM5-209ENST00000468872 ARHGAP5-AS1Q96IT6 56 aa0.21□□□□□ -2.38
LSM5-209ENST00000468872 ETDCA0A1B0GVM5 59 aa0.2□□□□□ -2.38
LSM5-209ENST00000468872 LINC01549A6NIU2 74 aa0.19□□□□□ -2.38
LSM5-209ENST00000468872 C6orf48Q9UBA6 75 aa0.19□□□□□ -2.38
LSM5-209ENST00000468872 IAPPP10997 89 aa0.14□□□□□ -2.39
LSM5-209ENST00000468872 NDUFA1O15239 70 aa0.13□□□□□ -2.39
LSM5-209ENST00000468872 SNRPGP15A8MWD9 76 aa0.11□□□□□ -2.39
LSM5-209ENST00000468872 S100ZQ8WXG8 99 aa0.1□□□□□ -2.39
LSM5-209ENST00000468872 CMC2Q9NRP2 79 aa0.1□□□□□ -2.39
LSM5-209ENST00000468872 K7EMI3 77 aa0.06□□□□□ -2.4
LSM5-209ENST00000468872 S4R3F8 94 aa0.04□□□□□ -2.4
LSM5-209ENST00000468872 IGIPA6NJ69 53 aa0.02□□□□□ -2.41
LSM5-209ENST00000468872 FCER1GP30273 86 aa-0.01□□□□□ -2.41
LSM5-209ENST00000468872 M0QY20 66 aa-0.02□□□□□ -2.41
LSM5-209ENST00000468872 NMES1Q9C002 83 aa-0.03□□□□□ -2.41
LSM5-209ENST00000468872 M0QZ58 72 aa-0.04□□□□□ -2.42
LSM5-209ENST00000468872 TOMM7Q9P0U1 55 aa-0.06□□□□□ -2.42
LSM5-209ENST00000468872 SERF2P84101 59 aa-0.07□□□□□ -2.42
LSM5-209ENST00000468872 LINC00308Q8TCZ7 52 aa-0.11□□□□□ -2.43
LSM5-209ENST00000468872 RPL39LQ96EH5 51 aaKnown RBP-0.12□□□□□ -2.43
LSM5-209ENST00000468872 IGLV5-48A0A075B6I7 105 aa-0.14□□□□□ -2.43
LSM5-209ENST00000468872 LINC01546A6NGU7 62 aa-0.14□□□□□ -2.43
LSM5-209ENST00000468872 TMEM167BQ9NRX6 74 aa-0.14□□□□□ -2.43
LSM5-209ENST00000468872 H0YGX0 51 aa-0.18□□□□□ -2.44
LSM5-209ENST00000468872 RPL39P62891 51 aaKnown RBP-0.19□□□□□ -2.44
LSM5-209ENST00000468872 SMIM2Q9BVW6 85 aa-0.2□□□□□ -2.44
LSM5-209ENST00000468872 PLNP26678 52 aa-0.21□□□□□ -2.44
LSM5-209ENST00000468872 POLR2KP53803 58 aaKnown RBP-0.23□□□□□ -2.45
LSM5-209ENST00000468872 MMP24-AS1A0A0U1RRL7 71 aa-0.27□□□□□ -2.45
LSM5-209ENST00000468872 SMIM27A0A1W2PRY6 76 aa-0.28□□□□□ -2.45
LSM5-209ENST00000468872 TNP1P09430 55 aa-0.32□□□□□ -2.46
LSM5-209ENST00000468872 TOMM5Q8N4H5 51 aa-0.55□□□□□ -2.5
Retrieved 78 of 20,778 RNA–protein pairs in 94.8 ms