RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 KRTAP2-3P0C7H8 128 aa1.76□□□□□ -2.13
SORT1-202ENST00000466471 MT1HP80294 61 aa1.76□□□□□ -2.13
SORT1-202ENST00000466471 SPINK6Q6UWN8 80 aa1.76□□□□□ -2.13
SORT1-202ENST00000466471 KRTAP2-4Q9BYR9 128 aa1.76□□□□□ -2.13
SORT1-202ENST00000466471 R4GN34 69 aa1.75□□□□□ -2.13
SORT1-202ENST00000466471 RPL37P61927 97 aaKnown RBP1.74□□□□□ -2.13
SORT1-202ENST00000466471 FLGP20930 4061 aaPredicted RBP1.73□□□□□ -2.13
SORT1-202ENST00000466471 KRTAP19-2Q3LHN2 52 aa1.72□□□□□ -2.13
SORT1-202ENST00000466471 LCE3AQ5TA76 89 aa1.72□□□□□ -2.13
SORT1-202ENST00000466471 TPRXLQ17RH7 258 aa1.71□□□□□ -2.14
SORT1-202ENST00000466471 KRTAP5-2Q701N4 177 aa1.71□□□□□ -2.14
SORT1-202ENST00000466471 KRTAP4-1Q9BYQ7 146 aa1.7□□□□□ -2.14
SORT1-202ENST00000466471 KRTAP19-6Q3LI70 58 aa1.69□□□□□ -2.14
SORT1-202ENST00000466471 KRTAP13-4Q3LI77 160 aa1.68□□□□□ -2.14
SORT1-202ENST00000466471 LCE3EQ5T5B0 92 aa1.68□□□□□ -2.14
SORT1-202ENST00000466471 KRTAP2-1Q9BYU5 128 aa1.68□□□□□ -2.14
SORT1-202ENST00000466471 SPRR5A0A1B0GTR4 108 aa1.66□□□□□ -2.14
SORT1-202ENST00000466471 M0QZ58 72 aa1.66□□□□□ -2.14
SORT1-202ENST00000466471 CRIPTQ9P021 101 aa1.66□□□□□ -2.14
SORT1-202ENST00000466471 KRTAP12-1P59990 96 aa1.65□□□□□ -2.15
SORT1-202ENST00000466471 PRO2289Q9P1D8 64 aa1.65□□□□□ -2.15
SORT1-202ENST00000466471 S4R3F8 94 aa1.65□□□□□ -2.15
SORT1-202ENST00000466471 KRTAP12-2P59991 146 aa1.63□□□□□ -2.15
SORT1-202ENST00000466471 AHNAK2Q8IVF2 5795 aa1.62□□□□□ -2.15
SORT1-202ENST00000466471 M0R2T5 61 aa1.61□□□□□ -2.15
SORT1-202ENST00000466471 C10orf95Q9H7T3 257 aa1.61□□□□□ -2.15
SORT1-202ENST00000466471 PP632Q6XCG6 107 aa1.6□□□□□ -2.15
SORT1-202ENST00000466471 KRTAP5-10Q6L8G5 202 aa1.58□□□□□ -2.16
SORT1-202ENST00000466471 C9orf92A6NGG3 77 aa1.57□□□□□ -2.16
SORT1-202ENST00000466471 KRTAP5-7Q6L8G8 165 aa1.57□□□□□ -2.16
SORT1-202ENST00000466471 PLAC4Q8WY50 150 aa1.57□□□□□ -2.16
SORT1-202ENST00000466471 A0A0D9SG42 100 aa1.56□□□□□ -2.16
SORT1-202ENST00000466471 KRTAP5-5Q701N2 237 aaPredicted RBP1.56□□□□□ -2.16
SORT1-202ENST00000466471 HMCN1Q96RW7 5635 aa1.56□□□□□ -2.16
SORT1-202ENST00000466471 MT2AP02795 61 aa1.52□□□□□ -2.17
SORT1-202ENST00000466471 MT1FP04733 61 aa1.52□□□□□ -2.17
SORT1-202ENST00000466471 SPRR2EP22531 72 aa1.52□□□□□ -2.17
SORT1-202ENST00000466471 SPRR2BP35325 72 aa1.52□□□□□ -2.17
SORT1-202ENST00000466471 SPRR2AP35326 72 aa1.52□□□□□ -2.17
SORT1-202ENST00000466471 LCE1CQ5T751 118 aa1.49□□□□□ -2.17
SORT1-202ENST00000466471 LCE1BQ5T7P3 118 aa1.49□□□□□ -2.17
SORT1-202ENST00000466471 DSTQ03001 7570 aaKnown RBP1.49□□□□□ -2.17
SORT1-202ENST00000466471 SPRR2DP22532 72 aa1.47□□□□□ -2.17
SORT1-202ENST00000466471 INE1O15225 51 aa1.46□□□□□ -2.18
SORT1-202ENST00000466471 KRTAP5-8O75690 187 aa1.45□□□□□ -2.18
SORT1-202ENST00000466471 AHNAKQ09666 5890 aaKnown RBP1.45□□□□□ -2.18
SORT1-202ENST00000466471 KRTAP10-10P60014 251 aa1.44□□□□□ -2.18
SORT1-202ENST00000466471 TNP1P09430 55 aa1.43□□□□□ -2.18
SORT1-202ENST00000466471 SPRR2FQ96RM1 72 aa1.43□□□□□ -2.18
SORT1-202ENST00000466471 MUC5ACP98088 5654 aa1.41□□□□□ -2.18
SORT1-202ENST00000466471 MUC5BQ9HC84 5762 aaPredicted RBP1.41□□□□□ -2.18
SORT1-202ENST00000466471 KRTAP8-1Q8IUC2 63 aa1.39□□□□□ -2.19
SORT1-202ENST00000466471 SPRR2GQ9BYE4 73 aa1.38□□□□□ -2.19
SORT1-202ENST00000466471 MUC19Q7Z5P9 8384 aa1.38□□□□□ -2.19
SORT1-202ENST00000466471 LCE3DQ9BYE3 92 aa1.35□□□□□ -2.19
SORT1-202ENST00000466471 KRTAP19-8Q3LI54 63 aa1.31□□□□□ -2.2
SORT1-202ENST00000466471 MT1BP07438 61 aa1.29□□□□□ -2.2
SORT1-202ENST00000466471 MT4P47944 62 aa1.29□□□□□ -2.2
SORT1-202ENST00000466471 KRTAP12-3P60328 96 aa1.26□□□□□ -2.21
SORT1-202ENST00000466471 MT1XP80297 61 aa1.24□□□□□ -2.21
SORT1-202ENST00000466471 KRTAP19-5Q3LI72 72 aa1.19□□□□□ -2.22
SORT1-202ENST00000466471 KRTAP12-4P60329 112 aa1.16□□□□□ -2.22
SORT1-202ENST00000466471 KRTAP20-2Q3LI61 65 aa1.16□□□□□ -2.22
SORT1-202ENST00000466471 MT1EP04732 61 aa1.13□□□□□ -2.23
SORT1-202ENST00000466471 KRTAP19-7Q3SYF9 63 aa1.13□□□□□ -2.23
SORT1-202ENST00000466471 MT1LQ93083 61 aa1.1□□□□□ -2.23
SORT1-202ENST00000466471 SYNE1Q8NF91 8797 aaKnown RBP1.1□□□□□ -2.23
SORT1-202ENST00000466471 KRTAP21-2Q3LI59 83 aa1.08□□□□□ -2.24
SORT1-202ENST00000466471 KRTAP19-3Q7Z4W3 81 aa1.08□□□□□ -2.24
SORT1-202ENST00000466471 MT1AP04731 61 aa1.06□□□□□ -2.24
SORT1-202ENST00000466471 MT1GP13640 62 aa1.01□□□□□ -2.25
SORT1-202ENST00000466471 MT1MQ8N339 61 aa0.98□□□□□ -2.25
SORT1-202ENST00000466471 PRM1P04553 51 aa0.91□□□□□ -2.26
SORT1-202ENST00000466471 PHGR1C9JFL3 82 aa0.9□□□□□ -2.27
SORT1-202ENST00000466471 KRTAP6-1Q3LI64 71 aa0.89□□□□□ -2.27
SORT1-202ENST00000466471 KRTAP6-2Q3LI66 62 aa0.87□□□□□ -2.27
SORT1-202ENST00000466471 KRTAP21-1Q3LI58 79 aa0.71□□□□□ -2.3
SORT1-202ENST00000466471 MUC16Q8WXI7 14507 aa0.56□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 139.2 ms