RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 KRTAP19-5Q3LI72 72 aa6.29□□□□□ -1.4
EXOSC3-203ENST00000465229 SPRR5A0A1B0GTR4 108 aa6.25□□□□□ -1.41
EXOSC3-203ENST00000465229 MDN1Q9NU22 5596 aa6.22□□□□□ -1.41
EXOSC3-203ENST00000465229 MT1EP04732 61 aa6.21□□□□□ -1.41
EXOSC3-203ENST00000465229 NDUFAF8A1L188 74 aa6.14□□□□□ -1.43
EXOSC3-203ENST00000465229 LCE1AQ5T7P2 110 aa6.14□□□□□ -1.43
EXOSC3-203ENST00000465229 NEBP20929 6669 aa6.13□□□□□ -1.43
EXOSC3-203ENST00000465229 LUZP6Q538Z0 58 aa6.13□□□□□ -1.43
EXOSC3-203ENST00000465229 SPRR2EP22531 72 aa6.12□□□□□ -1.43
EXOSC3-203ENST00000465229 SPRR2BP35325 72 aa6.12□□□□□ -1.43
EXOSC3-203ENST00000465229 SPRR2AP35326 72 aa6.12□□□□□ -1.43
EXOSC3-203ENST00000465229 KRTAP19-3Q7Z4W3 81 aa6.04□□□□□ -1.44
EXOSC3-203ENST00000465229 MT1LQ93083 61 aa6.03□□□□□ -1.44
EXOSC3-203ENST00000465229 LCE5AQ5TCM9 118 aa5.99□□□□□ -1.45
EXOSC3-203ENST00000465229 KRTAP19-4Q3LI73 84 aa5.98□□□□□ -1.45
EXOSC3-203ENST00000465229 MT1GP13640 62 aa5.96□□□□□ -1.45
EXOSC3-203ENST00000465229 LCE3CQ5T5A8 94 aa5.92□□□□□ -1.46
EXOSC3-203ENST00000465229 SPRR2DP22532 72 aa5.91□□□□□ -1.46
EXOSC3-203ENST00000465229 MT1MQ8N339 61 aa5.87□□□□□ -1.47
EXOSC3-203ENST00000465229 H3BS24 57 aa5.82□□□□□ -1.48
EXOSC3-203ENST00000465229 KRTAP4-7Q9BYR0 210 aa5.8□□□□□ -1.48
EXOSC3-203ENST00000465229 KRTAP4-3Q9BYR4 195 aa5.75□□□□□ -1.49
EXOSC3-203ENST00000465229 KRTAP2-3P0C7H8 128 aa5.74□□□□□ -1.49
EXOSC3-203ENST00000465229 KRTAP2-4Q9BYR9 128 aa5.74□□□□□ -1.49
EXOSC3-203ENST00000465229 KRTAP20-1Q3LI63 56 aa5.73□□□□□ -1.49
EXOSC3-203ENST00000465229 DSTQ03001 7570 aaKnown RBP5.71□□□□□ -1.5
EXOSC3-203ENST00000465229 LCE3BQ5TA77 95 aa5.7□□□□□ -1.5
EXOSC3-203ENST00000465229 KRTAP9-6A8MVA2 160 aa5.59□□□□□ -1.52
EXOSC3-203ENST00000465229 KRTAP2-2Q9BYT5 123 aa5.59□□□□□ -1.52
EXOSC3-203ENST00000465229 KRTAP2-1Q9BYU5 128 aa5.59□□□□□ -1.52
EXOSC3-203ENST00000465229 A0A0A0MQY5 61 aa5.5□□□□□ -1.53
EXOSC3-203ENST00000465229 KRTAP9-9Q9BYP9 154 aa5.43□□□□□ -1.54
EXOSC3-203ENST00000465229 KRTAP9-4Q9BYQ2 154 aa5.43□□□□□ -1.54
EXOSC3-203ENST00000465229 KRTAP4-12Q9BQ66 201 aa5.41□□□□□ -1.54
EXOSC3-203ENST00000465229 KRTAP5-5Q701N2 237 aaPredicted RBP5.34□□□□□ -1.55
EXOSC3-203ENST00000465229 KRTAP5-4Q6L8H1 288 aa5.28□□□□□ -1.56
EXOSC3-203ENST00000465229 LCE4AQ5TA78 99 aa5.25□□□□□ -1.57
EXOSC3-203ENST00000465229 KRTAP4-9Q9BYQ8 210 aa5.19□□□□□ -1.58
EXOSC3-203ENST00000465229 LCE1DQ5T752 114 aa5.15□□□□□ -1.58
EXOSC3-203ENST00000465229 INE1O15225 51 aa5.14□□□□□ -1.59
EXOSC3-203ENST00000465229 MT4P47944 62 aa5.14□□□□□ -1.59
EXOSC3-203ENST00000465229 MT1AP04731 61 aa5.12□□□□□ -1.59
EXOSC3-203ENST00000465229 KRTAP6-1Q3LI64 71 aa5.08□□□□□ -1.6
EXOSC3-203ENST00000465229 SYNE1Q8NF91 8797 aaKnown RBP5.08□□□□□ -1.6
EXOSC3-203ENST00000465229 HMCN1Q96RW7 5635 aa5.07□□□□□ -1.6
EXOSC3-203ENST00000465229 KRTAP12-4P60329 112 aa5.05□□□□□ -1.6
EXOSC3-203ENST00000465229 KRTAP4-2Q9BYR5 136 aa5.05□□□□□ -1.6
EXOSC3-203ENST00000465229 KRTAP20-2Q3LI61 65 aa4.94□□□□□ -1.62
EXOSC3-203ENST00000465229 GPR98Q8WXG9 6306 aa4.93□□□□□ -1.62
EXOSC3-203ENST00000465229 KRTAP4-11Q9BYQ6 195 aa4.82□□□□□ -1.64
EXOSC3-203ENST00000465229 KRTAP5-3Q6L8H2 238 aa4.79□□□□□ -1.64
EXOSC3-203ENST00000465229 KRTAP6-2Q3LI66 62 aa4.75□□□□□ -1.65
EXOSC3-203ENST00000465229 KRTAP5-2Q701N4 177 aa4.72□□□□□ -1.65
EXOSC3-203ENST00000465229 MT3P25713 68 aa4.66□□□□□ -1.66
EXOSC3-203ENST00000465229 AHNAK2Q8IVF2 5795 aa4.65□□□□□ -1.66
EXOSC3-203ENST00000465229 KRTAP5-10Q6L8G5 202 aa4.48□□□□□ -1.69
EXOSC3-203ENST00000465229 LCE3DQ9BYE3 92 aa4.48□□□□□ -1.69
EXOSC3-203ENST00000465229 OBSCNQ5VST9 7968 aa4.4□□□□□ -1.71
EXOSC3-203ENST00000465229 LCE3EQ5T5B0 92 aa4.39□□□□□ -1.71
EXOSC3-203ENST00000465229 KRTAP5-8O75690 187 aa4.23□□□□□ -1.73
EXOSC3-203ENST00000465229 KRTAP5-7Q6L8G8 165 aa4.21□□□□□ -1.74
EXOSC3-203ENST00000465229 LCE1EQ5T753 118 aa4.15□□□□□ -1.74
EXOSC3-203ENST00000465229 KRTAP5-1Q6L8H4 278 aa4.14□□□□□ -1.75
EXOSC3-203ENST00000465229 MUC5ACP98088 5654 aa4.05□□□□□ -1.76
EXOSC3-203ENST00000465229 PRM1P04553 51 aa3.92□□□□□ -1.78
EXOSC3-203ENST00000465229 LCE1BQ5T7P3 118 aa3.88□□□□□ -1.79
EXOSC3-203ENST00000465229 LCE1CQ5T751 118 aa3.86□□□□□ -1.79
EXOSC3-203ENST00000465229 AHNAKQ09666 5890 aaKnown RBP3.79□□□□□ -1.8
EXOSC3-203ENST00000465229 MUC5BQ9HC84 5762 aaPredicted RBP3.77□□□□□ -1.81
EXOSC3-203ENST00000465229 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.58□□□□□ -1.84
EXOSC3-203ENST00000465229 KRTAP5-11Q6L8G4 156 aa3.44□□□□□ -1.86
EXOSC3-203ENST00000465229 KRTAP21-2Q3LI59 83 aa3.35□□□□□ -1.87
EXOSC3-203ENST00000465229 LCE1FQ5T754 118 aa3.2□□□□□ -1.9
EXOSC3-203ENST00000465229 KRTAP4-4Q9BYR3 166 aa3□□□□□ -1.93
EXOSC3-203ENST00000465229 PHGR1C9JFL3 82 aa2.96□□□□□ -1.94
EXOSC3-203ENST00000465229 MUC19Q7Z5P9 8384 aa2.67□□□□□ -1.98
EXOSC3-203ENST00000465229 KRTAP21-1Q3LI58 79 aa2.48□□□□□ -2.01
EXOSC3-203ENST00000465229 MUC16Q8WXI7 14507 aa1.87□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 83.5 ms