RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 KRTAP9-6A8MVA2 160 aa4.8□□□□□ -1.64
NCL-207ENST00000461347 SPRR2FQ96RM1 72 aa4.8□□□□□ -1.64
NCL-207ENST00000461347 KRTAP12-4P60329 112 aa4.77□□□□□ -1.65
NCL-207ENST00000461347 LCE2DQ5TA82 110 aaPredicted RBP4.77□□□□□ -1.65
NCL-207ENST00000461347 LCE3BQ5TA77 95 aa4.71□□□□□ -1.66
NCL-207ENST00000461347 LOC100996750A0A140TA64 210 aa4.69□□□□□ -1.66
NCL-207ENST00000461347 KRTAP4-3Q9BYR4 195 aa4.68□□□□□ -1.66
NCL-207ENST00000461347 KRTAP2-3P0C7H8 128 aa4.66□□□□□ -1.66
NCL-207ENST00000461347 KRTAP2-4Q9BYR9 128 aa4.66□□□□□ -1.66
NCL-207ENST00000461347 KRTAP2-1Q9BYU5 128 aa4.66□□□□□ -1.66
NCL-207ENST00000461347 KRTAP19-6Q3LI70 58 aa4.65□□□□□ -1.67
NCL-207ENST00000461347 KRTAP19-3Q7Z4W3 81 aa4.61□□□□□ -1.67
NCL-207ENST00000461347 FCGBPQ9Y6R7 5405 aaPredicted RBP4.6□□□□□ -1.67
NCL-207ENST00000461347 DSTQ03001 7570 aaKnown RBP4.6□□□□□ -1.67
NCL-207ENST00000461347 MT1MQ8N339 61 aa4.55□□□□□ -1.68
NCL-207ENST00000461347 LCE3DQ9BYE3 92 aa4.42□□□□□ -1.7
NCL-207ENST00000461347 KRTAP4-9Q9BYQ8 210 aa4.37□□□□□ -1.71
NCL-207ENST00000461347 KRTAP9-2Q9BYQ4 174 aa4.36□□□□□ -1.71
NCL-207ENST00000461347 MUC12Q9UKN1 5478 aa4.36□□□□□ -1.71
NCL-207ENST00000461347 LCE3EQ5T5B0 92 aa4.36□□□□□ -1.71
NCL-207ENST00000461347 SPRR2EP22531 72 aa4.31□□□□□ -1.72
NCL-207ENST00000461347 SPRR2BP35325 72 aa4.31□□□□□ -1.72
NCL-207ENST00000461347 SPRR2AP35326 72 aa4.31□□□□□ -1.72
NCL-207ENST00000461347 SYNE2Q8WXH0 6885 aaKnown RBP4.27□□□□□ -1.73
NCL-207ENST00000461347 PRM1P04553 51 aa4.25□□□□□ -1.73
NCL-207ENST00000461347 LCE5AQ5TCM9 118 aa4.15□□□□□ -1.74
NCL-207ENST00000461347 KRTAP5-9P26371 169 aa4.15□□□□□ -1.74
NCL-207ENST00000461347 KRTAP6-1Q3LI64 71 aa4.14□□□□□ -1.75
NCL-207ENST00000461347 MT1AP04731 61 aa4.13□□□□□ -1.75
NCL-207ENST00000461347 SPRR2DP22532 72 aa4.12□□□□□ -1.75
NCL-207ENST00000461347 MACF1Q9UPN3 7388 aaKnown RBP4.12□□□□□ -1.75
NCL-207ENST00000461347 MUC19Q7Z5P9 8384 aa4.06□□□□□ -1.76
NCL-207ENST00000461347 KRTAP9-7A8MTY7 169 aa4.05□□□□□ -1.76
NCL-207ENST00000461347 MT3P25713 68 aa3.97□□□□□ -1.77
NCL-207ENST00000461347 KRTAP9-6A0A140TA67 174 aa3.96□□□□□ -1.77
NCL-207ENST00000461347 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.94□□□□□ -1.78
NCL-207ENST00000461347 KRTAP6-3Q3LI67 103 aa3.92□□□□□ -1.78
NCL-207ENST00000461347 LCE1AQ5T7P2 110 aa3.91□□□□□ -1.78
NCL-207ENST00000461347 KRTAP6-2Q3LI66 62 aa3.89□□□□□ -1.79
NCL-207ENST00000461347 MDN1Q9NU22 5596 aa3.85□□□□□ -1.79
NCL-207ENST00000461347 KRTAP9-4Q9BYQ2 154 aa3.82□□□□□ -1.8
NCL-207ENST00000461347 KRTAP5-5Q701N2 237 aaPredicted RBP3.75□□□□□ -1.81
NCL-207ENST00000461347 MT4P47944 62 aa3.75□□□□□ -1.81
NCL-207ENST00000461347 LCE1EQ5T753 118 aa3.71□□□□□ -1.82
NCL-207ENST00000461347 NEBP20929 6669 aa3.64□□□□□ -1.83
NCL-207ENST00000461347 LCE1DQ5T752 114 aa3.61□□□□□ -1.83
NCL-207ENST00000461347 LCE1BQ5T7P3 118 aa3.56□□□□□ -1.84
NCL-207ENST00000461347 KRTAP2-2Q9BYT5 123 aa3.55□□□□□ -1.84
NCL-207ENST00000461347 KRTAP5-4Q6L8H1 288 aa3.54□□□□□ -1.84
NCL-207ENST00000461347 KRTAP4-6Q9BYQ5 205 aa3.34□□□□□ -1.88
NCL-207ENST00000461347 LCE4AQ5TA78 99 aa3.27□□□□□ -1.89
NCL-207ENST00000461347 KRTAP5-2Q701N4 177 aa3.25□□□□□ -1.89
NCL-207ENST00000461347 KRTAP4-11Q9BYQ6 195 aa3.25□□□□□ -1.89
NCL-207ENST00000461347 KRTAP20-2Q3LI61 65 aa3.18□□□□□ -1.9
NCL-207ENST00000461347 KRTAP20-1Q3LI63 56 aa3.18□□□□□ -1.9
NCL-207ENST00000461347 KRTAP5-3Q6L8H2 238 aa3.17□□□□□ -1.9
NCL-207ENST00000461347 HMCN1Q96RW7 5635 aa3.11□□□□□ -1.91
NCL-207ENST00000461347 LCE1FQ5T754 118 aa3.01□□□□□ -1.93
NCL-207ENST00000461347 MUC5ACP98088 5654 aa2.98□□□□□ -1.93
NCL-207ENST00000461347 KRTAP4-4Q9BYR3 166 aa2.79□□□□□ -1.96
NCL-207ENST00000461347 KRTAP5-10Q6L8G5 202 aa2.77□□□□□ -1.97
NCL-207ENST00000461347 KRTAP5-7Q6L8G8 165 aa2.76□□□□□ -1.97
NCL-207ENST00000461347 AHNAK2Q8IVF2 5795 aa2.76□□□□□ -1.97
NCL-207ENST00000461347 KRTAP5-1Q6L8H4 278 aa2.76□□□□□ -1.97
NCL-207ENST00000461347 KRTAP5-8O75690 187 aa2.69□□□□□ -1.98
NCL-207ENST00000461347 LCE1CQ5T751 118 aa2.64□□□□□ -1.99
NCL-207ENST00000461347 KRTAP4-2Q9BYR5 136 aa2.64□□□□□ -1.99
NCL-207ENST00000461347 KRTAP4-12Q9BQ66 201 aa2.61□□□□□ -1.99
NCL-207ENST00000461347 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.58□□□□□ -2
NCL-207ENST00000461347 GPR98Q8WXG9 6306 aa2.5□□□□□ -2.01
NCL-207ENST00000461347 KRTAP9-9Q9BYP9 154 aa2.47□□□□□ -2.01
NCL-207ENST00000461347 KRTAP21-2Q3LI59 83 aa2.42□□□□□ -2.02
NCL-207ENST00000461347 MUC5BQ9HC84 5762 aaPredicted RBP2.34□□□□□ -2.03
NCL-207ENST00000461347 KRTAP5-11Q6L8G4 156 aa2.33□□□□□ -2.04
NCL-207ENST00000461347 KRTAP21-1Q3LI58 79 aa2.22□□□□□ -2.05
NCL-207ENST00000461347 AHNAKQ09666 5890 aaKnown RBP2.01□□□□□ -2.09
NCL-207ENST00000461347 PHGR1C9JFL3 82 aa2□□□□□ -2.09
NCL-207ENST00000461347 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 65.2 ms