RNA–Protein interactions for RNA: ENST00000456517.2

HIPK3-203, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HIPK3, Length 7,399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-203ENST00000456517 KRTAP19-2Q3LHN2 52 aa4.32□□□□□ -1.72
HIPK3-203ENST00000456517 LCE5AQ5TCM9 118 aa4.3□□□□□ -1.72
HIPK3-203ENST00000456517 KRTAP20-1Q3LI63 56 aa4.27□□□□□ -1.73
HIPK3-203ENST00000456517 SYNE1Q8NF91 8797 aaKnown RBP4.25□□□□□ -1.73
HIPK3-203ENST00000456517 HYDINQ4G0P3 5121 aa4.23□□□□□ -1.73
HIPK3-203ENST00000456517 EPPK1P58107 5090 aaKnown RBP4.21□□□□□ -1.73
HIPK3-203ENST00000456517 KMT2CQ8NEZ4 4911 aaKnown RBP4.2□□□□□ -1.74
HIPK3-203ENST00000456517 MT1AP04731 61 aa4.18□□□□□ -1.74
HIPK3-203ENST00000456517 TNXBP22105 4242 aa4.18□□□□□ -1.74
HIPK3-203ENST00000456517 BIRC6Q9NR09 4857 aa4.18□□□□□ -1.74
HIPK3-203ENST00000456517 KRTAP9-7A8MTY7 169 aa4.14□□□□□ -1.75
HIPK3-203ENST00000456517 KRTAP4-9Q9BYQ8 210 aa4.11□□□□□ -1.75
HIPK3-203ENST00000456517 KRTAP2-3P0C7H8 128 aa4.11□□□□□ -1.75
HIPK3-203ENST00000456517 KRTAP2-4Q9BYR9 128 aa4.11□□□□□ -1.75
HIPK3-203ENST00000456517 KRTAP2-1Q9BYU5 128 aa4.11□□□□□ -1.75
HIPK3-203ENST00000456517 KRTAP19-7Q3SYF9 63 aa4.09□□□□□ -1.76
HIPK3-203ENST00000456517 SYNE2Q8WXH0 6885 aaKnown RBP4.08□□□□□ -1.76
HIPK3-203ENST00000456517 LCE2AQ5TA79 106 aaPredicted RBP4.07□□□□□ -1.76
HIPK3-203ENST00000456517 MUC17Q685J3 4493 aa4.06□□□□□ -1.76
HIPK3-203ENST00000456517 FSIP2Q5CZC0 6907 aa4.03□□□□□ -1.76
HIPK3-203ENST00000456517 LCE4AQ5TA78 99 aa4.02□□□□□ -1.77
HIPK3-203ENST00000456517 LCE1CQ5T751 118 aa4□□□□□ -1.77
HIPK3-203ENST00000456517 LCE1EQ5T753 118 aa4□□□□□ -1.77
HIPK3-203ENST00000456517 LCE1FQ5T754 118 aa4□□□□□ -1.77
HIPK3-203ENST00000456517 LCE1AQ5T7P2 110 aa4□□□□□ -1.77
HIPK3-203ENST00000456517 KRTAP6-3Q3LI67 103 aa3.99□□□□□ -1.77
HIPK3-203ENST00000456517 KRTAP6-2Q3LI66 62 aa3.96□□□□□ -1.78
HIPK3-203ENST00000456517 KRTAP6-1Q3LI64 71 aa3.89□□□□□ -1.79
HIPK3-203ENST00000456517 KRTAP2-2Q9BYT5 123 aa3.89□□□□□ -1.79
HIPK3-203ENST00000456517 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.88□□□□□ -1.79
HIPK3-203ENST00000456517 KRTAP9-4Q9BYQ2 154 aa3.87□□□□□ -1.79
HIPK3-203ENST00000456517 MUC2Q02817 5179 aa3.85□□□□□ -1.79
HIPK3-203ENST00000456517 OBSCNQ5VST9 7968 aa3.84□□□□□ -1.8
HIPK3-203ENST00000456517 HMCN2Q8NDA2 5059 aa3.83□□□□□ -1.8
HIPK3-203ENST00000456517 ABCA13Q86UQ4 5058 aa3.77□□□□□ -1.81
HIPK3-203ENST00000456517 UBR4Q5T4S7 5183 aa3.75□□□□□ -1.81
HIPK3-203ENST00000456517 FAT4Q6V0I7 4981 aa3.75□□□□□ -1.81
HIPK3-203ENST00000456517 RNF213Q63HN8 5207 aa3.74□□□□□ -1.81
HIPK3-203ENST00000456517 KRTAP9-6A8MVA2 160 aa3.65□□□□□ -1.83
HIPK3-203ENST00000456517 KRTAP9-9Q9BYP9 154 aa3.63□□□□□ -1.83
HIPK3-203ENST00000456517 DSTQ03001 7570 aaKnown RBP3.45□□□□□ -1.86
HIPK3-203ENST00000456517 MACF1Q9UPN3 7388 aaKnown RBP3.37□□□□□ -1.87
HIPK3-203ENST00000456517 KRTAP4-11Q9BYQ6 195 aa3.34□□□□□ -1.87
HIPK3-203ENST00000456517 FCGBPQ9Y6R7 5405 aaPredicted RBP3.33□□□□□ -1.88
HIPK3-203ENST00000456517 KRTAP20-2Q3LI61 65 aa3.31□□□□□ -1.88
HIPK3-203ENST00000456517 KRTAP4-6Q9BYQ5 205 aa3.26□□□□□ -1.89
HIPK3-203ENST00000456517 USH2AO75445 5202 aa3.24□□□□□ -1.89
HIPK3-203ENST00000456517 NEBP20929 6669 aa3.2□□□□□ -1.9
HIPK3-203ENST00000456517 KRTAP5-9P26371 169 aa3.17□□□□□ -1.9
HIPK3-203ENST00000456517 KRTAP4-4Q9BYR3 166 aa3.1□□□□□ -1.91
HIPK3-203ENST00000456517 MUC19Q7Z5P9 8384 aa3.09□□□□□ -1.91
HIPK3-203ENST00000456517 KRTAP4-12Q9BQ66 201 aa3.09□□□□□ -1.92
HIPK3-203ENST00000456517 KRTAP4-2Q9BYR5 136 aa3.09□□□□□ -1.92
HIPK3-203ENST00000456517 KMT2DO14686 5537 aa3.06□□□□□ -1.92
HIPK3-203ENST00000456517 GPR98Q8WXG9 6306 aa2.95□□□□□ -1.94
HIPK3-203ENST00000456517 KRTAP5-4Q6L8H1 288 aa2.92□□□□□ -1.94
HIPK3-203ENST00000456517 SSPOA2VEC9 5147 aa2.9□□□□□ -1.95
HIPK3-203ENST00000456517 MDN1Q9NU22 5596 aa2.86□□□□□ -1.95
HIPK3-203ENST00000456517 MUC12Q9UKN1 5478 aa2.77□□□□□ -1.97
HIPK3-203ENST00000456517 KRTAP5-5Q701N2 237 aaPredicted RBP2.73□□□□□ -1.97
HIPK3-203ENST00000456517 KRTAP5-3Q6L8H2 238 aa2.59□□□□□ -1.99
HIPK3-203ENST00000456517 MUC5ACP98088 5654 aa2.5□□□□□ -2.01
HIPK3-203ENST00000456517 PHGR1C9JFL3 82 aa2.39□□□□□ -2.03
HIPK3-203ENST00000456517 KRTAP5-8O75690 187 aa2.38□□□□□ -2.03
HIPK3-203ENST00000456517 HMCN1Q96RW7 5635 aa2.28□□□□□ -2.04
HIPK3-203ENST00000456517 AHNAK2Q8IVF2 5795 aa2.19□□□□□ -2.06
HIPK3-203ENST00000456517 KRTAP5-10Q6L8G5 202 aa2.18□□□□□ -2.06
HIPK3-203ENST00000456517 MUC5BQ9HC84 5762 aaPredicted RBP2.09□□□□□ -2.08
HIPK3-203ENST00000456517 KRTAP5-2Q701N4 177 aa2.05□□□□□ -2.08
HIPK3-203ENST00000456517 KRTAP5-11Q6L8G4 156 aa2□□□□□ -2.09
HIPK3-203ENST00000456517 AHNAKQ09666 5890 aaKnown RBP1.97□□□□□ -2.09
HIPK3-203ENST00000456517 KRTAP5-1Q6L8H4 278 aa1.97□□□□□ -2.09
HIPK3-203ENST00000456517 KRTAP21-2Q3LI59 83 aa1.82□□□□□ -2.12
HIPK3-203ENST00000456517 KRTAP21-1Q3LI58 79 aa1.78□□□□□ -2.12
HIPK3-203ENST00000456517 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.61□□□□□ -2.15
HIPK3-203ENST00000456517 KRTAP5-7Q6L8G8 165 aa1.56□□□□□ -2.16
HIPK3-203ENST00000456517 MUC16Q8WXI7 14507 aa1.38□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 109.3 ms