RNA–Protein interactions for RNA: ENST00000454516.6

CNOT10-206, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

TSL 2 BASIC

Gene CNOT10, Length 2,760 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-206ENST00000454516 MACF1Q9UPN3 7388 aaKnown RBP1.8□□□□□ -2.12
CNOT10-206ENST00000454516 M0R2T5 61 aa1.8□□□□□ -2.12
CNOT10-206ENST00000454516 M0QZ58 72 aa1.79□□□□□ -2.12
CNOT10-206ENST00000454516 FLGP20930 4061 aaPredicted RBP1.78□□□□□ -2.12
CNOT10-206ENST00000454516 KRTAP19-2Q3LHN2 52 aa1.76□□□□□ -2.13
CNOT10-206ENST00000454516 KRTAP2-3P0C7H8 128 aa1.74□□□□□ -2.13
CNOT10-206ENST00000454516 KRTAP4-4Q9BYR3 166 aa1.74□□□□□ -2.13
CNOT10-206ENST00000454516 KRTAP2-4Q9BYR9 128 aa1.74□□□□□ -2.13
CNOT10-206ENST00000454516 LCE1FQ5T754 118 aa1.74□□□□□ -2.13
CNOT10-206ENST00000454516 KRTAP5-1Q6L8H4 278 aa1.73□□□□□ -2.13
CNOT10-206ENST00000454516 KMT2DO14686 5537 aa1.72□□□□□ -2.13
CNOT10-206ENST00000454516 MT3P25713 68 aa1.72□□□□□ -2.13
CNOT10-206ENST00000454516 FCGBPQ9Y6R7 5405 aaPredicted RBP1.72□□□□□ -2.13
CNOT10-206ENST00000454516 SPRR5A0A1B0GTR4 108 aa1.71□□□□□ -2.14
CNOT10-206ENST00000454516 AHNAKQ09666 5890 aaKnown RBP1.7□□□□□ -2.14
CNOT10-206ENST00000454516 MT1HP80294 61 aa1.69□□□□□ -2.14
CNOT10-206ENST00000454516 KRTAP10-10P60014 251 aa1.68□□□□□ -2.14
CNOT10-206ENST00000454516 MT1FP04733 61 aa1.65□□□□□ -2.14
CNOT10-206ENST00000454516 KRTAP5-2Q701N4 177 aa1.65□□□□□ -2.14
CNOT10-206ENST00000454516 KRTAP5-7Q6L8G8 165 aa1.65□□□□□ -2.15
CNOT10-206ENST00000454516 KRTAP2-1Q9BYU5 128 aa1.64□□□□□ -2.15
CNOT10-206ENST00000454516 KRTAP5-11Q6L8G4 156 aa1.64□□□□□ -2.15
CNOT10-206ENST00000454516 MT2AP02795 61 aa1.63□□□□□ -2.15
CNOT10-206ENST00000454516 TNP1P09430 55 aa1.62□□□□□ -2.15
CNOT10-206ENST00000454516 MUC12Q9UKN1 5478 aa1.61□□□□□ -2.15
CNOT10-206ENST00000454516 AHNAK2Q8IVF2 5795 aa1.59□□□□□ -2.15
CNOT10-206ENST00000454516 KRTAP10-7P60409 375 aaPredicted RBP1.59□□□□□ -2.16
CNOT10-206ENST00000454516 DSTQ03001 7570 aaKnown RBP1.58□□□□□ -2.16
CNOT10-206ENST00000454516 LCE3CQ5T5A8 94 aa1.57□□□□□ -2.16
CNOT10-206ENST00000454516 SPRR2GQ9BYE4 73 aa1.57□□□□□ -2.16
CNOT10-206ENST00000454516 LCE3AQ5TA76 89 aa1.56□□□□□ -2.16
CNOT10-206ENST00000454516 LCE1EQ5T753 118 aa1.55□□□□□ -2.16
CNOT10-206ENST00000454516 KRTAP19-8Q3LI54 63 aa1.53□□□□□ -2.16
CNOT10-206ENST00000454516 KRTAP5-8O75690 187 aa1.53□□□□□ -2.17
CNOT10-206ENST00000454516 KRTAP10-12P60413 245 aa1.53□□□□□ -2.17
CNOT10-206ENST00000454516 MDN1Q9NU22 5596 aa1.52□□□□□ -2.17
CNOT10-206ENST00000454516 MT1BP07438 61 aa1.52□□□□□ -2.17
CNOT10-206ENST00000454516 KRTAP5-10Q6L8G5 202 aa1.52□□□□□ -2.17
CNOT10-206ENST00000454516 OBSCNQ5VST9 7968 aa1.51□□□□□ -2.17
CNOT10-206ENST00000454516 KRTAP19-6Q3LI70 58 aa1.48□□□□□ -2.17
CNOT10-206ENST00000454516 MT1XP80297 61 aa1.47□□□□□ -2.17
CNOT10-206ENST00000454516 KRTAP12-4P60329 112 aa1.47□□□□□ -2.17
CNOT10-206ENST00000454516 KRTAP5-5Q701N2 237 aaPredicted RBP1.47□□□□□ -2.17
CNOT10-206ENST00000454516 KRTAP10-5P60370 271 aa1.47□□□□□ -2.17
CNOT10-206ENST00000454516 LCE3EQ5T5B0 92 aa1.45□□□□□ -2.18
CNOT10-206ENST00000454516 SYNE1Q8NF91 8797 aaKnown RBP1.44□□□□□ -2.18
CNOT10-206ENST00000454516 KRTAP12-3P60328 96 aa1.43□□□□□ -2.18
CNOT10-206ENST00000454516 KRTAP8-1Q8IUC2 63 aa1.42□□□□□ -2.18
CNOT10-206ENST00000454516 KRTAP4-3Q9BYR4 195 aa1.42□□□□□ -2.18
CNOT10-206ENST00000454516 MUC5ACP98088 5654 aa1.4□□□□□ -2.18
CNOT10-206ENST00000454516 KRTAP9-6A8MVA2 160 aa1.4□□□□□ -2.19
CNOT10-206ENST00000454516 SPRR2EP22531 72 aa1.39□□□□□ -2.19
CNOT10-206ENST00000454516 SPRR2BP35325 72 aa1.39□□□□□ -2.19
CNOT10-206ENST00000454516 SPRR2AP35326 72 aa1.39□□□□□ -2.19
CNOT10-206ENST00000454516 KRTAP19-5Q3LI72 72 aa1.38□□□□□ -2.19
CNOT10-206ENST00000454516 SPRR2DP22532 72 aa1.36□□□□□ -2.19
CNOT10-206ENST00000454516 SPRR2FQ96RM1 72 aa1.35□□□□□ -2.19
CNOT10-206ENST00000454516 LCE3DQ9BYE3 92 aa1.35□□□□□ -2.19
CNOT10-206ENST00000454516 KRTAP19-7Q3SYF9 63 aa1.31□□□□□ -2.2
CNOT10-206ENST00000454516 MT1EP04732 61 aa1.27□□□□□ -2.21
CNOT10-206ENST00000454516 MT1GP13640 62 aa1.26□□□□□ -2.21
CNOT10-206ENST00000454516 MT1LQ93083 61 aa1.25□□□□□ -2.21
CNOT10-206ENST00000454516 PRM1P04553 51 aa1.24□□□□□ -2.21
CNOT10-206ENST00000454516 KRTAP19-3Q7Z4W3 81 aa1.22□□□□□ -2.21
CNOT10-206ENST00000454516 MT1MQ8N339 61 aa1.21□□□□□ -2.22
CNOT10-206ENST00000454516 MT4P47944 62 aa1.19□□□□□ -2.22
CNOT10-206ENST00000454516 KRTAP6-1Q3LI64 71 aa1.11□□□□□ -2.23
CNOT10-206ENST00000454516 KRTAP6-2Q3LI66 62 aa1.09□□□□□ -2.24
CNOT10-206ENST00000454516 MT1AP04731 61 aa1.06□□□□□ -2.24
CNOT10-206ENST00000454516 MUC19Q7Z5P9 8384 aa1.05□□□□□ -2.24
CNOT10-206ENST00000454516 LCE1CQ5T751 118 aa1.02□□□□□ -2.25
CNOT10-206ENST00000454516 LCE1BQ5T7P3 118 aa1.02□□□□□ -2.25
CNOT10-206ENST00000454516 KRTAP20-2Q3LI61 65 aa1.01□□□□□ -2.25
CNOT10-206ENST00000454516 PHGR1C9JFL3 82 aa0.91□□□□□ -2.26
CNOT10-206ENST00000454516 KRTAP21-1Q3LI58 79 aa0.79□□□□□ -2.28
CNOT10-206ENST00000454516 KRTAP21-2Q3LI59 83 aa0.72□□□□□ -2.29
CNOT10-206ENST00000454516 MUC16Q8WXI7 14507 aa0.48□□□□□ -2.33
Retrieved 77 of 20,778 RNA–protein pairs in 12.2 ms