RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 KRTAP2-1Q9BYU5 128 aa4.62□□□□□ -1.67
UBE2D3-210ENST00000453744 LOC100996750A0A140TA64 210 aa4.62□□□□□ -1.67
UBE2D3-210ENST00000453744 FCGBPQ9Y6R7 5405 aaPredicted RBP4.61□□□□□ -1.67
UBE2D3-210ENST00000453744 KRTAP12-4P60329 112 aa4.59□□□□□ -1.67
UBE2D3-210ENST00000453744 KRTAP4-3Q9BYR4 195 aa4.59□□□□□ -1.68
UBE2D3-210ENST00000453744 MT1EP04732 61 aa4.58□□□□□ -1.68
UBE2D3-210ENST00000453744 LCE2AQ5TA79 106 aaPredicted RBP4.58□□□□□ -1.68
UBE2D3-210ENST00000453744 LCE3BQ5TA77 95 aa4.46□□□□□ -1.7
UBE2D3-210ENST00000453744 MUC12Q9UKN1 5478 aa4.43□□□□□ -1.7
UBE2D3-210ENST00000453744 SSPOA2VEC9 5147 aa4.43□□□□□ -1.7
UBE2D3-210ENST00000453744 SYNE2Q8WXH0 6885 aaKnown RBP4.42□□□□□ -1.7
UBE2D3-210ENST00000453744 KRTAP19-4Q3LI73 84 aa4.41□□□□□ -1.7
UBE2D3-210ENST00000453744 KRTAP9-2Q9BYQ4 174 aa4.38□□□□□ -1.71
UBE2D3-210ENST00000453744 KRTAP4-9Q9BYQ8 210 aa4.33□□□□□ -1.72
UBE2D3-210ENST00000453744 SPRR2EP22531 72 aa4.31□□□□□ -1.72
UBE2D3-210ENST00000453744 SPRR2BP35325 72 aa4.31□□□□□ -1.72
UBE2D3-210ENST00000453744 SPRR2AP35326 72 aa4.31□□□□□ -1.72
UBE2D3-210ENST00000453744 MT1MQ8N339 61 aa4.31□□□□□ -1.72
UBE2D3-210ENST00000453744 KRTAP19-3Q7Z4W3 81 aa4.29□□□□□ -1.72
UBE2D3-210ENST00000453744 MACF1Q9UPN3 7388 aaKnown RBP4.24□□□□□ -1.73
UBE2D3-210ENST00000453744 LCE2DQ5TA82 110 aaPredicted RBP4.19□□□□□ -1.74
UBE2D3-210ENST00000453744 LCE3DQ9BYE3 92 aa4.16□□□□□ -1.74
UBE2D3-210ENST00000453744 KRTAP19-6Q3LI70 58 aa4.14□□□□□ -1.75
UBE2D3-210ENST00000453744 SPRR2DP22532 72 aa4.12□□□□□ -1.75
UBE2D3-210ENST00000453744 LCE3EQ5T5B0 92 aa4.09□□□□□ -1.75
UBE2D3-210ENST00000453744 PRM1P04553 51 aa4.09□□□□□ -1.76
UBE2D3-210ENST00000453744 KRTAP9-7A8MTY7 169 aa4.02□□□□□ -1.77
UBE2D3-210ENST00000453744 KRTAP9-6A0A140TA67 174 aa4.01□□□□□ -1.77
UBE2D3-210ENST00000453744 KRTAP6-1Q3LI64 71 aa4□□□□□ -1.77
UBE2D3-210ENST00000453744 LCE5AQ5TCM9 118 aa3.95□□□□□ -1.78
UBE2D3-210ENST00000453744 MDN1Q9NU22 5596 aa3.91□□□□□ -1.78
UBE2D3-210ENST00000453744 MT4P47944 62 aa3.87□□□□□ -1.79
UBE2D3-210ENST00000453744 MT1AP04731 61 aa3.87□□□□□ -1.79
UBE2D3-210ENST00000453744 KRTAP6-2Q3LI66 62 aa3.79□□□□□ -1.8
UBE2D3-210ENST00000453744 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.78□□□□□ -1.8
UBE2D3-210ENST00000453744 KRTAP5-5Q701N2 237 aaPredicted RBP3.72□□□□□ -1.81
UBE2D3-210ENST00000453744 LCE1AQ5T7P2 110 aa3.67□□□□□ -1.82
UBE2D3-210ENST00000453744 MT3P25713 68 aa3.61□□□□□ -1.83
UBE2D3-210ENST00000453744 KRTAP9-4Q9BYQ2 154 aa3.6□□□□□ -1.83
UBE2D3-210ENST00000453744 MUC19Q7Z5P9 8384 aa3.56□□□□□ -1.84
UBE2D3-210ENST00000453744 KRTAP6-3Q3LI67 103 aa3.55□□□□□ -1.84
UBE2D3-210ENST00000453744 NEBP20929 6669 aa3.49□□□□□ -1.85
UBE2D3-210ENST00000453744 LCE1DQ5T752 114 aa3.48□□□□□ -1.85
UBE2D3-210ENST00000453744 KRTAP5-9P26371 169 aa3.47□□□□□ -1.85
UBE2D3-210ENST00000453744 KRTAP2-2Q9BYT5 123 aa3.47□□□□□ -1.85
UBE2D3-210ENST00000453744 KRTAP20-1Q3LI63 56 aa3.46□□□□□ -1.85
UBE2D3-210ENST00000453744 LCE1BQ5T7P3 118 aa3.46□□□□□ -1.86
UBE2D3-210ENST00000453744 KRTAP4-6Q9BYQ5 205 aa3.25□□□□□ -1.89
UBE2D3-210ENST00000453744 GPR98Q8WXG9 6306 aa3.22□□□□□ -1.89
UBE2D3-210ENST00000453744 LCE1EQ5T753 118 aa3.15□□□□□ -1.9
UBE2D3-210ENST00000453744 KRTAP4-11Q9BYQ6 195 aa3.12□□□□□ -1.91
UBE2D3-210ENST00000453744 MUC5ACP98088 5654 aa3.11□□□□□ -1.91
UBE2D3-210ENST00000453744 LCE4AQ5TA78 99 aa3.1□□□□□ -1.91
UBE2D3-210ENST00000453744 HMCN1Q96RW7 5635 aa3.01□□□□□ -1.93
UBE2D3-210ENST00000453744 KRTAP20-2Q3LI61 65 aa2.96□□□□□ -1.94
UBE2D3-210ENST00000453744 KRTAP5-4Q6L8H1 288 aa2.92□□□□□ -1.94
UBE2D3-210ENST00000453744 LCE1CQ5T751 118 aa2.78□□□□□ -1.96
UBE2D3-210ENST00000453744 LCE1FQ5T754 118 aa2.78□□□□□ -1.96
UBE2D3-210ENST00000453744 KRTAP5-10Q6L8G5 202 aa2.73□□□□□ -1.97
UBE2D3-210ENST00000453744 KRTAP4-12Q9BQ66 201 aa2.71□□□□□ -1.98
UBE2D3-210ENST00000453744 KRTAP4-2Q9BYR5 136 aa2.71□□□□□ -1.98
UBE2D3-210ENST00000453744 AHNAK2Q8IVF2 5795 aa2.69□□□□□ -1.98
UBE2D3-210ENST00000453744 KRTAP4-4Q9BYR3 166 aa2.69□□□□□ -1.98
UBE2D3-210ENST00000453744 KRTAP5-2Q701N4 177 aa2.68□□□□□ -1.98
UBE2D3-210ENST00000453744 KRTAP5-3Q6L8H2 238 aa2.67□□□□□ -1.98
UBE2D3-210ENST00000453744 KRTAP9-9Q9BYP9 154 aa2.67□□□□□ -1.98
UBE2D3-210ENST00000453744 MUC5BQ9HC84 5762 aaPredicted RBP2.53□□□□□ -2
UBE2D3-210ENST00000453744 KRTAP5-1Q6L8H4 278 aa2.45□□□□□ -2.02
UBE2D3-210ENST00000453744 KRTAP5-8O75690 187 aa2.42□□□□□ -2.02
UBE2D3-210ENST00000453744 KRTAP21-2Q3LI59 83 aa2.39□□□□□ -2.03
UBE2D3-210ENST00000453744 AHNAKQ09666 5890 aaKnown RBP2.29□□□□□ -2.04
UBE2D3-210ENST00000453744 KRTAP21-1Q3LI58 79 aa2.26□□□□□ -2.05
UBE2D3-210ENST00000453744 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.15□□□□□ -2.07
UBE2D3-210ENST00000453744 KRTAP5-7Q6L8G8 165 aa2.09□□□□□ -2.08
UBE2D3-210ENST00000453744 KRTAP5-11Q6L8G4 156 aa2.06□□□□□ -2.08
UBE2D3-210ENST00000453744 PHGR1C9JFL3 82 aa1.85□□□□□ -2.11
UBE2D3-210ENST00000453744 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 13.5 ms