RNA–Protein interactions for RNA: ENST00000450720.5

ALMS1P1-202, Transcript of ALMS1, centrosome and basal body associated protein pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1P1, Length 1,601 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1P1-202ENST00000450720 KRTAP19-5Q3LI72 72 aa6.14□□□□□ -1.43
ALMS1P1-202ENST00000450720 MT1EP04732 61 aa6.1□□□□□ -1.43
ALMS1P1-202ENST00000450720 SPRR2DP22532 72 aa6.04□□□□□ -1.44
ALMS1P1-202ENST00000450720 KRTAP20-1Q3LI63 56 aa6.02□□□□□ -1.45
ALMS1P1-202ENST00000450720 KRTAP19-3Q7Z4W3 81 aa5.98□□□□□ -1.45
ALMS1P1-202ENST00000450720 KRTAP12-3P60328 96 aa5.95□□□□□ -1.46
ALMS1P1-202ENST00000450720 KRTAP2-3P0C7H8 128 aa5.93□□□□□ -1.46
ALMS1P1-202ENST00000450720 KRTAP2-4Q9BYR9 128 aa5.93□□□□□ -1.46
ALMS1P1-202ENST00000450720 LCE5AQ5TCM9 118 aa5.92□□□□□ -1.46
ALMS1P1-202ENST00000450720 A0A0A0MQY5 61 aa5.89□□□□□ -1.47
ALMS1P1-202ENST00000450720 MT1LQ93083 61 aa5.89□□□□□ -1.47
ALMS1P1-202ENST00000450720 KRTAP23-1A1A580 65 aa5.88□□□□□ -1.47
ALMS1P1-202ENST00000450720 MT1GP13640 62 aa5.87□□□□□ -1.47
ALMS1P1-202ENST00000450720 PP632Q6XCG6 107 aa5.85□□□□□ -1.47
ALMS1P1-202ENST00000450720 LCE3BQ5TA77 95 aa5.84□□□□□ -1.47
ALMS1P1-202ENST00000450720 KRTAP15-1Q3LI76 137 aa5.8□□□□□ -1.48
ALMS1P1-202ENST00000450720 MT1MQ8N339 61 aa5.78□□□□□ -1.48
ALMS1P1-202ENST00000450720 KRTAP2-2Q9BYT5 123 aa5.77□□□□□ -1.49
ALMS1P1-202ENST00000450720 KRTAP2-1Q9BYU5 128 aa5.77□□□□□ -1.49
ALMS1P1-202ENST00000450720 DSTQ03001 7570 aaKnown RBP5.71□□□□□ -1.49
ALMS1P1-202ENST00000450720 NDUFAF8A1L188 74 aa5.66□□□□□ -1.5
ALMS1P1-202ENST00000450720 KRTAP4-3Q9BYR4 195 aa5.66□□□□□ -1.5
ALMS1P1-202ENST00000450720 KRTAP4-7Q9BYR0 210 aa5.66□□□□□ -1.5
ALMS1P1-202ENST00000450720 KRTAP19-4Q3LI73 84 aa5.55□□□□□ -1.52
ALMS1P1-202ENST00000450720 LCE3CQ5T5A8 94 aa5.5□□□□□ -1.53
ALMS1P1-202ENST00000450720 LUZP6Q538Z0 58 aa5.37□□□□□ -1.55
ALMS1P1-202ENST00000450720 KRTAP4-9Q9BYQ8 210 aa5.36□□□□□ -1.55
ALMS1P1-202ENST00000450720 LOC100996750A0A140TA64 210 aa5.34□□□□□ -1.55
ALMS1P1-202ENST00000450720 LCE4AQ5TA78 99 aa5.32□□□□□ -1.56
ALMS1P1-202ENST00000450720 MT4P47944 62 aa5.27□□□□□ -1.57
ALMS1P1-202ENST00000450720 KRTAP5-4Q6L8H1 288 aa5.26□□□□□ -1.57
ALMS1P1-202ENST00000450720 LCE1DQ5T752 114 aa5.25□□□□□ -1.57
ALMS1P1-202ENST00000450720 KRTAP5-5Q701N2 237 aaPredicted RBP5.24□□□□□ -1.57
ALMS1P1-202ENST00000450720 KRTAP9-6A8MVA2 160 aa5.17□□□□□ -1.58
ALMS1P1-202ENST00000450720 HMCN1Q96RW7 5635 aa5.15□□□□□ -1.59
ALMS1P1-202ENST00000450720 KRTAP4-6Q9BYQ5 205 aa5.13□□□□□ -1.59
ALMS1P1-202ENST00000450720 SPRR5A0A1B0GTR4 108 aa5.08□□□□□ -1.6
ALMS1P1-202ENST00000450720 KRTAP12-4P60329 112 aa5.06□□□□□ -1.6
ALMS1P1-202ENST00000450720 MT1AP04731 61 aa5.01□□□□□ -1.61
ALMS1P1-202ENST00000450720 SYNE1Q8NF91 8797 aaKnown RBP4.98□□□□□ -1.61
ALMS1P1-202ENST00000450720 KRTAP20-2Q3LI61 65 aa4.97□□□□□ -1.61
ALMS1P1-202ENST00000450720 KRTAP6-1Q3LI64 71 aa4.97□□□□□ -1.61
ALMS1P1-202ENST00000450720 INE1O15225 51 aa4.89□□□□□ -1.63
ALMS1P1-202ENST00000450720 GPR98Q8WXG9 6306 aa4.82□□□□□ -1.64
ALMS1P1-202ENST00000450720 KRTAP9-4Q9BYQ2 154 aa4.81□□□□□ -1.64
ALMS1P1-202ENST00000450720 KRTAP5-3Q6L8H2 238 aa4.79□□□□□ -1.64
ALMS1P1-202ENST00000450720 AHNAK2Q8IVF2 5795 aa4.78□□□□□ -1.64
ALMS1P1-202ENST00000450720 KRTAP6-2Q3LI66 62 aa4.7□□□□□ -1.66
ALMS1P1-202ENST00000450720 KRTAP5-2Q701N4 177 aa4.67□□□□□ -1.66
ALMS1P1-202ENST00000450720 KRTAP5-10Q6L8G5 202 aa4.66□□□□□ -1.66
ALMS1P1-202ENST00000450720 MT3P25713 68 aa4.58□□□□□ -1.68
ALMS1P1-202ENST00000450720 KRTAP4-11Q9BYQ6 195 aa4.46□□□□□ -1.7
ALMS1P1-202ENST00000450720 KRTAP5-7Q6L8G8 165 aa4.41□□□□□ -1.7
ALMS1P1-202ENST00000450720 OBSCNQ5VST9 7968 aa4.39□□□□□ -1.71
ALMS1P1-202ENST00000450720 KRTAP5-8O75690 187 aa4.28□□□□□ -1.72
ALMS1P1-202ENST00000450720 KRTAP4-12Q9BQ66 201 aa4.17□□□□□ -1.74
ALMS1P1-202ENST00000450720 KRTAP5-1Q6L8H4 278 aa4.13□□□□□ -1.75
ALMS1P1-202ENST00000450720 LCE1EQ5T753 118 aa4.08□□□□□ -1.76
ALMS1P1-202ENST00000450720 LCE3DQ9BYE3 92 aa4.05□□□□□ -1.76
ALMS1P1-202ENST00000450720 KRTAP9-9Q9BYP9 154 aa4.03□□□□□ -1.76
ALMS1P1-202ENST00000450720 MUC5ACP98088 5654 aa3.99□□□□□ -1.77
ALMS1P1-202ENST00000450720 LCE1BQ5T7P3 118 aa3.9□□□□□ -1.79
ALMS1P1-202ENST00000450720 MUC5BQ9HC84 5762 aaPredicted RBP3.89□□□□□ -1.79
ALMS1P1-202ENST00000450720 LCE3EQ5T5B0 92 aa3.86□□□□□ -1.79
ALMS1P1-202ENST00000450720 KRTAP4-2Q9BYR5 136 aa3.83□□□□□ -1.8
ALMS1P1-202ENST00000450720 AHNAKQ09666 5890 aaKnown RBP3.8□□□□□ -1.8
ALMS1P1-202ENST00000450720 LCE1CQ5T751 118 aa3.8□□□□□ -1.8
ALMS1P1-202ENST00000450720 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.48□□□□□ -1.85
ALMS1P1-202ENST00000450720 KRTAP5-11Q6L8G4 156 aa3.41□□□□□ -1.86
ALMS1P1-202ENST00000450720 KRTAP21-2Q3LI59 83 aa3.25□□□□□ -1.89
ALMS1P1-202ENST00000450720 LCE1FQ5T754 118 aa3.21□□□□□ -1.9
ALMS1P1-202ENST00000450720 PRM1P04553 51 aa3.15□□□□□ -1.91
ALMS1P1-202ENST00000450720 KRTAP4-4Q9BYR3 166 aa2.98□□□□□ -1.93
ALMS1P1-202ENST00000450720 PHGR1C9JFL3 82 aa2.93□□□□□ -1.94
ALMS1P1-202ENST00000450720 MUC19Q7Z5P9 8384 aa2.67□□□□□ -1.98
ALMS1P1-202ENST00000450720 KRTAP21-1Q3LI58 79 aa2.14□□□□□ -2.07
ALMS1P1-202ENST00000450720 MUC16Q8WXI7 14507 aa1.87□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 104.6 ms