RNA–Protein interactions for RNA: ENST00000449943.5

SYVN1-204, Transcript of synoviolin 1, humanhuman

TSL 2

Gene SYVN1, Length 4,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-204ENST00000449943 SSPOA2VEC9 5147 aa3.85□□□□□ -1.79
SYVN1-204ENST00000449943 KRTAP2-3P0C7H8 128 aa3.83□□□□□ -1.8
SYVN1-204ENST00000449943 KRTAP2-4Q9BYR9 128 aa3.83□□□□□ -1.8
SYVN1-204ENST00000449943 KRTAP2-1Q9BYU5 128 aa3.83□□□□□ -1.8
SYVN1-204ENST00000449943 MT1GP13640 62 aa3.78□□□□□ -1.81
SYVN1-204ENST00000449943 KRTAP19-6Q3LI70 58 aa3.78□□□□□ -1.81
SYVN1-204ENST00000449943 SPRR2EP22531 72 aa3.77□□□□□ -1.81
SYVN1-204ENST00000449943 SPRR2BP35325 72 aa3.77□□□□□ -1.81
SYVN1-204ENST00000449943 SPRR2AP35326 72 aa3.77□□□□□ -1.81
SYVN1-204ENST00000449943 KRTAP4-3Q9BYR4 195 aa3.76□□□□□ -1.81
SYVN1-204ENST00000449943 LOC100996750A0A140TA64 210 aa3.76□□□□□ -1.81
SYVN1-204ENST00000449943 FCGBPQ9Y6R7 5405 aaPredicted RBP3.72□□□□□ -1.81
SYVN1-204ENST00000449943 MUC12Q9UKN1 5478 aa3.71□□□□□ -1.82
SYVN1-204ENST00000449943 KRTAP19-3Q7Z4W3 81 aa3.68□□□□□ -1.82
SYVN1-204ENST00000449943 SPRR2DP22532 72 aa3.64□□□□□ -1.83
SYVN1-204ENST00000449943 MT1MQ8N339 61 aa3.63□□□□□ -1.83
SYVN1-204ENST00000449943 KRTAP9-2Q9BYQ4 174 aa3.63□□□□□ -1.83
SYVN1-204ENST00000449943 DSTQ03001 7570 aaKnown RBP3.62□□□□□ -1.83
SYVN1-204ENST00000449943 KRTAP12-4P60329 112 aa3.52□□□□□ -1.85
SYVN1-204ENST00000449943 LCE3BQ5TA77 95 aa3.52□□□□□ -1.85
SYVN1-204ENST00000449943 OBSCNQ5VST9 7968 aa3.47□□□□□ -1.85
SYVN1-204ENST00000449943 MACF1Q9UPN3 7388 aaKnown RBP3.46□□□□□ -1.86
SYVN1-204ENST00000449943 LCE5AQ5TCM9 118 aa3.45□□□□□ -1.86
SYVN1-204ENST00000449943 KRTAP9-6A0A140TA67 174 aa3.42□□□□□ -1.86
SYVN1-204ENST00000449943 KRTAP4-9Q9BYQ8 210 aa3.42□□□□□ -1.86
SYVN1-204ENST00000449943 SYNE2Q8WXH0 6885 aaKnown RBP3.39□□□□□ -1.87
SYVN1-204ENST00000449943 LCE3DQ9BYE3 92 aa3.34□□□□□ -1.87
SYVN1-204ENST00000449943 MDN1Q9NU22 5596 aa3.33□□□□□ -1.88
SYVN1-204ENST00000449943 KRTAP6-1Q3LI64 71 aa3.33□□□□□ -1.88
SYVN1-204ENST00000449943 LCE1AQ5T7P2 110 aa3.29□□□□□ -1.88
SYVN1-204ENST00000449943 MT4P47944 62 aa3.29□□□□□ -1.88
SYVN1-204ENST00000449943 LCE3EQ5T5B0 92 aa3.29□□□□□ -1.88
SYVN1-204ENST00000449943 KRTAP6-3Q3LI67 103 aa3.26□□□□□ -1.89
SYVN1-204ENST00000449943 MT1AP04731 61 aa3.25□□□□□ -1.89
SYVN1-204ENST00000449943 KRTAP9-7A8MTY7 169 aa3.24□□□□□ -1.89
SYVN1-204ENST00000449943 MT3P25713 68 aa3.23□□□□□ -1.89
SYVN1-204ENST00000449943 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.2□□□□□ -1.9
SYVN1-204ENST00000449943 KRTAP5-5Q701N2 237 aaPredicted RBP3.13□□□□□ -1.91
SYVN1-204ENST00000449943 KRTAP20-1Q3LI63 56 aa3.12□□□□□ -1.91
SYVN1-204ENST00000449943 PRM1P04553 51 aa3.11□□□□□ -1.91
SYVN1-204ENST00000449943 KRTAP5-9P26371 169 aa3.11□□□□□ -1.91
SYVN1-204ENST00000449943 KRTAP9-4Q9BYQ2 154 aa3.05□□□□□ -1.92
SYVN1-204ENST00000449943 LCE1BQ5T7P3 118 aa3.04□□□□□ -1.92
SYVN1-204ENST00000449943 LCE1DQ5T752 114 aa3.04□□□□□ -1.92
SYVN1-204ENST00000449943 KRTAP6-2Q3LI66 62 aa2.99□□□□□ -1.93
SYVN1-204ENST00000449943 LCE4AQ5TA78 99 aa2.98□□□□□ -1.93
SYVN1-204ENST00000449943 KRTAP2-2Q9BYT5 123 aa2.95□□□□□ -1.94
SYVN1-204ENST00000449943 GPR98Q8WXG9 6306 aa2.91□□□□□ -1.94
SYVN1-204ENST00000449943 MUC19Q7Z5P9 8384 aa2.77□□□□□ -1.97
SYVN1-204ENST00000449943 NEBP20929 6669 aa2.76□□□□□ -1.97
SYVN1-204ENST00000449943 KRTAP4-6Q9BYQ5 205 aa2.72□□□□□ -1.97
SYVN1-204ENST00000449943 KRTAP5-4Q6L8H1 288 aa2.7□□□□□ -1.98
SYVN1-204ENST00000449943 KRTAP20-2Q3LI61 65 aa2.63□□□□□ -1.99
SYVN1-204ENST00000449943 LCE1CQ5T751 118 aa2.6□□□□□ -1.99
SYVN1-204ENST00000449943 LCE1EQ5T753 118 aa2.6□□□□□ -1.99
SYVN1-204ENST00000449943 LCE1FQ5T754 118 aa2.6□□□□□ -1.99
SYVN1-204ENST00000449943 HMCN1Q96RW7 5635 aa2.55□□□□□ -2
SYVN1-204ENST00000449943 KRTAP5-2Q701N4 177 aa2.53□□□□□ -2
SYVN1-204ENST00000449943 MUC5ACP98088 5654 aa2.51□□□□□ -2.01
SYVN1-204ENST00000449943 KRTAP9-9Q9BYP9 154 aa2.51□□□□□ -2.01
SYVN1-204ENST00000449943 KRTAP5-3Q6L8H2 238 aa2.43□□□□□ -2.02
SYVN1-204ENST00000449943 KRTAP4-11Q9BYQ6 195 aa2.37□□□□□ -2.03
SYVN1-204ENST00000449943 KRTAP4-12Q9BQ66 201 aa2.36□□□□□ -2.03
SYVN1-204ENST00000449943 KRTAP5-10Q6L8G5 202 aa2.32□□□□□ -2.04
SYVN1-204ENST00000449943 KRTAP5-1Q6L8H4 278 aa2.23□□□□□ -2.05
SYVN1-204ENST00000449943 KRTAP4-2Q9BYR5 136 aa2.23□□□□□ -2.05
SYVN1-204ENST00000449943 AHNAK2Q8IVF2 5795 aa2.17□□□□□ -2.06
SYVN1-204ENST00000449943 KRTAP4-4Q9BYR3 166 aa2.12□□□□□ -2.07
SYVN1-204ENST00000449943 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
SYVN1-204ENST00000449943 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.03□□□□□ -2.08
SYVN1-204ENST00000449943 KRTAP5-8O75690 187 aa2.01□□□□□ -2.09
SYVN1-204ENST00000449943 MUC5BQ9HC84 5762 aaPredicted RBP1.92□□□□□ -2.1
SYVN1-204ENST00000449943 KRTAP5-7Q6L8G8 165 aa1.91□□□□□ -2.1
SYVN1-204ENST00000449943 KRTAP21-1Q3LI58 79 aa1.88□□□□□ -2.11
SYVN1-204ENST00000449943 KRTAP5-11Q6L8G4 156 aa1.87□□□□□ -2.11
SYVN1-204ENST00000449943 AHNAKQ09666 5890 aaKnown RBP1.83□□□□□ -2.12
SYVN1-204ENST00000449943 PHGR1C9JFL3 82 aa1.7□□□□□ -2.14
SYVN1-204ENST00000449943 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 565.9 ms