RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 KRTAP8-1Q8IUC2 63 aa2.3□□□□□ -2.04
SDCBP-205ENST00000447267 SPRR4Q96PI1 79 aa2.3□□□□□ -2.04
SDCBP-205ENST00000447267 MT1BP07438 61 aa2.29□□□□□ -2.04
SDCBP-205ENST00000447267 LCE3DQ9BYE3 92 aa2.29□□□□□ -2.04
SDCBP-205ENST00000447267 DHRS4-AS1Q9P1J3 65 aa2.28□□□□□ -2.04
SDCBP-205ENST00000447267 UQCR11O14957 56 aa2.27□□□□□ -2.05
SDCBP-205ENST00000447267 Q6ZQY7 126 aa2.27□□□□□ -2.05
SDCBP-205ENST00000447267 DMAC1Q96GE9 116 aa2.27□□□□□ -2.05
SDCBP-205ENST00000447267 MUC5BQ9HC84 5762 aaPredicted RBP2.26□□□□□ -2.05
SDCBP-205ENST00000447267 A8MUU9 505 aa2.26□□□□□ -2.05
SDCBP-205ENST00000447267 A0A1B0GVX0 72 aa2.24□□□□□ -2.05
SDCBP-205ENST00000447267 HRES1P13985 223 aa2.23□□□□□ -2.05
SDCBP-205ENST00000447267 Q8IZM0 81 aa2.23□□□□□ -2.05
SDCBP-205ENST00000447267 A0A1B0GU69 56 aa2.22□□□□□ -2.05
SDCBP-205ENST00000447267 K7EQZ3 153 aa2.22□□□□□ -2.05
SDCBP-205ENST00000447267 Q5W150 140 aa2.22□□□□□ -2.05
SDCBP-205ENST00000447267 SSBP3-AS1Q7Z2R9 100 aa2.22□□□□□ -2.05
SDCBP-205ENST00000447267 LINC00472Q9H8W2 130 aa2.22□□□□□ -2.05
SDCBP-205ENST00000447267 TOMM7Q9P0U1 55 aa2.22□□□□□ -2.05
SDCBP-205ENST00000447267 SPINT4Q6UDR6 99 aa2.21□□□□□ -2.06
SDCBP-205ENST00000447267 MUC5ACP98088 5654 aa2.21□□□□□ -2.06
SDCBP-205ENST00000447267 CAMK2N1Q7Z7J9 78 aa2.19□□□□□ -2.06
SDCBP-205ENST00000447267 WFDC13Q8IUB5 93 aa2.19□□□□□ -2.06
SDCBP-205ENST00000447267 IGLV5-48A0A075B6I7 105 aa2.17□□□□□ -2.06
SDCBP-205ENST00000447267 COX17Q14061 63 aa2.17□□□□□ -2.06
SDCBP-205ENST00000447267 DEFB116Q30KQ4 102 aa2.17□□□□□ -2.06
SDCBP-205ENST00000447267 A0A0G2JQZ4 141 aa2.16□□□□□ -2.06
SDCBP-205ENST00000447267 Q96NJ1 140 aa2.15□□□□□ -2.07
SDCBP-205ENST00000447267 KRTAP5-8O75690 187 aa2.14□□□□□ -2.07
SDCBP-205ENST00000447267 PP632Q6XCG6 107 aa2.14□□□□□ -2.07
SDCBP-205ENST00000447267 ACYP2P14621 99 aa2.13□□□□□ -2.07
SDCBP-205ENST00000447267 KRTAP19-8Q3LI54 63 aa2.12□□□□□ -2.07
SDCBP-205ENST00000447267 TP53AIP1Q9HCN2 124 aa2.12□□□□□ -2.07
SDCBP-205ENST00000447267 SPRR1AP35321 89 aa2.11□□□□□ -2.07
SDCBP-205ENST00000447267 A0A1B0GU33 70 aa2.1□□□□□ -2.07
SDCBP-205ENST00000447267 CRIPTQ9P021 101 aa2.1□□□□□ -2.07
SDCBP-205ENST00000447267 MUC19Q7Z5P9 8384 aa2.1□□□□□ -2.07
SDCBP-205ENST00000447267 MMP24-AS1A0A0U1RRL7 71 aa2.09□□□□□ -2.07
SDCBP-205ENST00000447267 DEFB105AQ8NG35 78 aa2.09□□□□□ -2.07
SDCBP-205ENST00000447267 Q6ZRX8 168 aa2.06□□□□□ -2.08
SDCBP-205ENST00000447267 H0YAA0 97 aa2.05□□□□□ -2.08
SDCBP-205ENST00000447267 IGFL1Q6UW32 110 aa2.03□□□□□ -2.08
SDCBP-205ENST00000447267 SPRR2GQ9BYE4 73 aa2.02□□□□□ -2.09
SDCBP-205ENST00000447267 PRO2289Q9P1D8 64 aa2.02□□□□□ -2.09
SDCBP-205ENST00000447267 SPRR1BP22528 89 aa2.01□□□□□ -2.09
SDCBP-205ENST00000447267 MRPL34Q9BQ48 92 aaKnown RBP2□□□□□ -2.09
SDCBP-205ENST00000447267 KRTAP20-2Q3LI61 65 aa1.99□□□□□ -2.09
SDCBP-205ENST00000447267 H1FX-AS1Q4G0G2 97 aa1.98□□□□□ -2.09
SDCBP-205ENST00000447267 C10orf95Q9H7T3 257 aa1.98□□□□□ -2.09
SDCBP-205ENST00000447267 MT1XP80297 61 aa1.97□□□□□ -2.09
SDCBP-205ENST00000447267 R4GN34 69 aa1.97□□□□□ -2.09
SDCBP-205ENST00000447267 PLAC4Q8WY50 150 aa1.95□□□□□ -2.1
SDCBP-205ENST00000447267 INE1O15225 51 aa1.89□□□□□ -2.11
SDCBP-205ENST00000447267 KRTAP19-3Q7Z4W3 81 aa1.88□□□□□ -2.11
SDCBP-205ENST00000447267 S4R3F8 94 aa1.82□□□□□ -2.12
SDCBP-205ENST00000447267 A0A0D9SG42 100 aa1.8□□□□□ -2.12
SDCBP-205ENST00000447267 MT1EP04732 61 aa1.78□□□□□ -2.12
SDCBP-205ENST00000447267 KRTAP13-4Q3LI77 160 aa1.77□□□□□ -2.13
SDCBP-205ENST00000447267 KRTAP19-7Q3SYF9 63 aa1.77□□□□□ -2.13
SDCBP-205ENST00000447267 KRTAP12-4P60329 112 aa1.76□□□□□ -2.13
SDCBP-205ENST00000447267 KRTAP21-2Q3LI59 83 aa1.76□□□□□ -2.13
SDCBP-205ENST00000447267 SYNE1Q8NF91 8797 aaKnown RBP1.76□□□□□ -2.13
SDCBP-205ENST00000447267 MT1GP13640 62 aa1.75□□□□□ -2.13
SDCBP-205ENST00000447267 MT1MQ8N339 61 aa1.75□□□□□ -2.13
SDCBP-205ENST00000447267 KRTAP12-1P59990 96 aa1.73□□□□□ -2.13
SDCBP-205ENST00000447267 M0QZ58 72 aa1.61□□□□□ -2.15
SDCBP-205ENST00000447267 MT1LQ93083 61 aa1.59□□□□□ -2.15
SDCBP-205ENST00000447267 KRTAP19-5Q3LI72 72 aa1.57□□□□□ -2.16
SDCBP-205ENST00000447267 PHGR1C9JFL3 82 aa1.56□□□□□ -2.16
SDCBP-205ENST00000447267 KRTAP6-2Q3LI66 62 aa1.48□□□□□ -2.17
SDCBP-205ENST00000447267 KRTAP12-3P60328 96 aa1.46□□□□□ -2.18
SDCBP-205ENST00000447267 TNP1P09430 55 aa1.45□□□□□ -2.18
SDCBP-205ENST00000447267 KRTAP6-1Q3LI64 71 aa1.41□□□□□ -2.18
SDCBP-205ENST00000447267 MT1AP04731 61 aa1.33□□□□□ -2.2
SDCBP-205ENST00000447267 KRTAP21-1Q3LI58 79 aa1.15□□□□□ -2.23
SDCBP-205ENST00000447267 PRM1P04553 51 aa1.13□□□□□ -2.23
SDCBP-205ENST00000447267 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 8.7 ms