RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 MT1EP04732 61 aa3.17□□□□□ -1.9
LIN54-202ENST00000442461 HMCN2Q8NDA2 5059 aa3.15□□□□□ -1.91
LIN54-202ENST00000442461 LCE2BO14633 110 aa3.11□□□□□ -1.91
LIN54-202ENST00000442461 KRTAP19-3Q7Z4W3 81 aa3.1□□□□□ -1.91
LIN54-202ENST00000442461 KRTAP9-6A8MVA2 160 aa3.1□□□□□ -1.91
LIN54-202ENST00000442461 FLGP20930 4061 aaPredicted RBP3.09□□□□□ -1.92
LIN54-202ENST00000442461 LOC100996750A0A140TA64 210 aa3.07□□□□□ -1.92
LIN54-202ENST00000442461 KRTAP19-7Q3SYF9 63 aa3.04□□□□□ -1.92
LIN54-202ENST00000442461 DSTQ03001 7570 aaKnown RBP3.03□□□□□ -1.92
LIN54-202ENST00000442461 LCE2AQ5TA79 106 aaPredicted RBP3.03□□□□□ -1.92
LIN54-202ENST00000442461 MT1MQ8N339 61 aa3.03□□□□□ -1.92
LIN54-202ENST00000442461 KRTAP4-9Q9BYQ8 210 aa2.99□□□□□ -1.93
LIN54-202ENST00000442461 KRTAP4-3Q9BYR4 195 aa2.99□□□□□ -1.93
LIN54-202ENST00000442461 MT3P25713 68 aa2.95□□□□□ -1.94
LIN54-202ENST00000442461 MT1AP04731 61 aa2.93□□□□□ -1.94
LIN54-202ENST00000442461 SPRR2EP22531 72 aa2.91□□□□□ -1.94
LIN54-202ENST00000442461 SPRR2BP35325 72 aa2.91□□□□□ -1.94
LIN54-202ENST00000442461 SPRR2AP35326 72 aa2.91□□□□□ -1.94
LIN54-202ENST00000442461 FCGBPQ9Y6R7 5405 aaPredicted RBP2.91□□□□□ -1.94
LIN54-202ENST00000442461 KRTAP9-7A8MTY7 169 aa2.89□□□□□ -1.95
LIN54-202ENST00000442461 KRTAP6-2Q3LI66 62 aa2.88□□□□□ -1.95
LIN54-202ENST00000442461 USH2AO75445 5202 aa2.87□□□□□ -1.95
LIN54-202ENST00000442461 KRTAP9-2Q9BYQ4 174 aa2.85□□□□□ -1.95
LIN54-202ENST00000442461 MACF1Q9UPN3 7388 aaKnown RBP2.82□□□□□ -1.96
LIN54-202ENST00000442461 SPRR2DP22532 72 aa2.79□□□□□ -1.96
LIN54-202ENST00000442461 KRTAP2-2Q9BYT5 123 aa2.76□□□□□ -1.97
LIN54-202ENST00000442461 SYNE2Q8WXH0 6885 aaKnown RBP2.74□□□□□ -1.97
LIN54-202ENST00000442461 KRTAP6-1Q3LI64 71 aa2.73□□□□□ -1.97
LIN54-202ENST00000442461 KRTAP9-6A0A140TA67 174 aa2.72□□□□□ -1.97
LIN54-202ENST00000442461 KMT2DO14686 5537 aa2.72□□□□□ -1.97
LIN54-202ENST00000442461 LCE1AQ5T7P2 110 aa2.71□□□□□ -1.97
LIN54-202ENST00000442461 MUC19Q7Z5P9 8384 aa2.69□□□□□ -1.98
LIN54-202ENST00000442461 KRTAP19-6Q3LI70 58 aa2.69□□□□□ -1.98
LIN54-202ENST00000442461 LCE1BQ5T7P3 118 aa2.66□□□□□ -1.98
LIN54-202ENST00000442461 LCE1DQ5T752 114 aa2.65□□□□□ -1.99
LIN54-202ENST00000442461 KRTAP9-4Q9BYQ2 154 aa2.59□□□□□ -1.99
LIN54-202ENST00000442461 KRTAP4-6Q9BYQ5 205 aa2.59□□□□□ -2
LIN54-202ENST00000442461 LCE1EQ5T753 118 aa2.57□□□□□ -2
LIN54-202ENST00000442461 LCE5AQ5TCM9 118 aa2.57□□□□□ -2
LIN54-202ENST00000442461 SSPOA2VEC9 5147 aa2.57□□□□□ -2
LIN54-202ENST00000442461 KRTAP6-3Q3LI67 103 aa2.56□□□□□ -2
LIN54-202ENST00000442461 MT4P47944 62 aa2.5□□□□□ -2.01
LIN54-202ENST00000442461 MUC12Q9UKN1 5478 aa2.49□□□□□ -2.01
LIN54-202ENST00000442461 KRTAP5-5Q701N2 237 aaPredicted RBP2.44□□□□□ -2.02
LIN54-202ENST00000442461 KRTAP4-11Q9BYQ6 195 aa2.41□□□□□ -2.02
LIN54-202ENST00000442461 KRTAP4-12Q9BQ66 201 aa2.38□□□□□ -2.03
LIN54-202ENST00000442461 MDN1Q9NU22 5596 aa2.36□□□□□ -2.03
LIN54-202ENST00000442461 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.35□□□□□ -2.03
LIN54-202ENST00000442461 KRTAP9-9Q9BYP9 154 aa2.24□□□□□ -2.05
LIN54-202ENST00000442461 LCE1FQ5T754 118 aa2.14□□□□□ -2.07
LIN54-202ENST00000442461 LCE4AQ5TA78 99 aa2.14□□□□□ -2.07
LIN54-202ENST00000442461 LCE1CQ5T751 118 aa2.09□□□□□ -2.07
LIN54-202ENST00000442461 KRTAP5-9P26371 169 aa2.07□□□□□ -2.08
LIN54-202ENST00000442461 KRTAP4-2Q9BYR5 136 aa2.05□□□□□ -2.08
LIN54-202ENST00000442461 GPR98Q8WXG9 6306 aa2□□□□□ -2.09
LIN54-202ENST00000442461 KRTAP4-4Q9BYR3 166 aa1.94□□□□□ -2.1
LIN54-202ENST00000442461 MUC5ACP98088 5654 aa1.93□□□□□ -2.1
LIN54-202ENST00000442461 KRTAP20-2Q3LI61 65 aa1.92□□□□□ -2.1
LIN54-202ENST00000442461 HMCN1Q96RW7 5635 aa1.92□□□□□ -2.1
LIN54-202ENST00000442461 NEBP20929 6669 aa1.91□□□□□ -2.1
LIN54-202ENST00000442461 KRTAP20-1Q3LI63 56 aa1.84□□□□□ -2.12
LIN54-202ENST00000442461 KRTAP5-10Q6L8G5 202 aa1.82□□□□□ -2.12
LIN54-202ENST00000442461 KRTAP5-3Q6L8H2 238 aa1.82□□□□□ -2.12
LIN54-202ENST00000442461 KRTAP5-4Q6L8H1 288 aa1.76□□□□□ -2.13
LIN54-202ENST00000442461 MUC5BQ9HC84 5762 aaPredicted RBP1.75□□□□□ -2.13
LIN54-202ENST00000442461 KRTAP5-2Q701N4 177 aa1.69□□□□□ -2.14
LIN54-202ENST00000442461 KRTAP21-1Q3LI58 79 aa1.63□□□□□ -2.15
LIN54-202ENST00000442461 AHNAK2Q8IVF2 5795 aa1.6□□□□□ -2.15
LIN54-202ENST00000442461 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.56□□□□□ -2.16
LIN54-202ENST00000442461 KRTAP5-1Q6L8H4 278 aa1.48□□□□□ -2.17
LIN54-202ENST00000442461 KRTAP21-2Q3LI59 83 aa1.44□□□□□ -2.18
LIN54-202ENST00000442461 AHNAKQ09666 5890 aaKnown RBP1.42□□□□□ -2.18
LIN54-202ENST00000442461 KRTAP5-11Q6L8G4 156 aa1.41□□□□□ -2.18
LIN54-202ENST00000442461 KRTAP5-7Q6L8G8 165 aa1.41□□□□□ -2.18
LIN54-202ENST00000442461 KRTAP5-8O75690 187 aa1.38□□□□□ -2.19
LIN54-202ENST00000442461 PHGR1C9JFL3 82 aa1.13□□□□□ -2.23
LIN54-202ENST00000442461 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 12.4 ms