RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 MT3P25713 68 aa1.34□□□□□ -2.2
LIG4-203ENST00000442234 KRTAP10-4P60372 401 aaPredicted RBP1.33□□□□□ -2.2
LIG4-203ENST00000442234 KRTAP1-4P0C5Y4 121 aa1.32□□□□□ -2.2
LIG4-203ENST00000442234 KRTAP5-2Q701N4 177 aa1.32□□□□□ -2.2
LIG4-203ENST00000442234 KRTAP4-1Q9BYQ7 146 aa1.31□□□□□ -2.2
LIG4-203ENST00000442234 KRTAP2-2Q9BYT5 123 aa1.3□□□□□ -2.2
LIG4-203ENST00000442234 RPS29P62273 56 aaKnown RBP1.3□□□□□ -2.2
LIG4-203ENST00000442234 MDN1Q9NU22 5596 aa1.29□□□□□ -2.2
LIG4-203ENST00000442234 KRTAP5-8O75690 187 aa1.28□□□□□ -2.2
LIG4-203ENST00000442234 TNP1P09430 55 aa1.28□□□□□ -2.2
LIG4-203ENST00000442234 SYNE1Q8NF91 8797 aaKnown RBP1.27□□□□□ -2.21
LIG4-203ENST00000442234 NEBP20929 6669 aa1.26□□□□□ -2.21
LIG4-203ENST00000442234 LCE1EQ5T753 118 aa1.26□□□□□ -2.21
LIG4-203ENST00000442234 MT1HP80294 61 aa1.25□□□□□ -2.21
LIG4-203ENST00000442234 FCGBPQ9Y6R7 5405 aaPredicted RBP1.25□□□□□ -2.21
LIG4-203ENST00000442234 MUC12Q9UKN1 5478 aa1.24□□□□□ -2.21
LIG4-203ENST00000442234 SPRR5A0A1B0GTR4 108 aa1.24□□□□□ -2.21
LIG4-203ENST00000442234 SPRR2FQ96RM1 72 aa1.2□□□□□ -2.22
LIG4-203ENST00000442234 MT1FP04733 61 aa1.17□□□□□ -2.22
LIG4-203ENST00000442234 KRTAP10-7P60409 375 aaPredicted RBP1.17□□□□□ -2.22
LIG4-203ENST00000442234 KRTAP20-1Q3LI63 56 aa1.17□□□□□ -2.22
LIG4-203ENST00000442234 MT2AP02795 61 aa1.16□□□□□ -2.22
LIG4-203ENST00000442234 SPRR2EP22531 72 aa1.16□□□□□ -2.22
LIG4-203ENST00000442234 SPRR2BP35325 72 aa1.16□□□□□ -2.22
LIG4-203ENST00000442234 SPRR2AP35326 72 aa1.16□□□□□ -2.22
LIG4-203ENST00000442234 KRTAP5-11Q6L8G4 156 aa1.16□□□□□ -2.22
LIG4-203ENST00000442234 LCE1FQ5T754 118 aa1.15□□□□□ -2.23
LIG4-203ENST00000442234 LCE3CQ5T5A8 94 aa1.14□□□□□ -2.23
LIG4-203ENST00000442234 KRTAP10-5P60370 271 aa1.13□□□□□ -2.23
LIG4-203ENST00000442234 KRTAP8-1Q8IUC2 63 aa1.12□□□□□ -2.23
LIG4-203ENST00000442234 AHNAKQ09666 5890 aaKnown RBP1.12□□□□□ -2.23
LIG4-203ENST00000442234 KRTAP10-12P60413 245 aa1.12□□□□□ -2.23
LIG4-203ENST00000442234 LCE3AQ5TA76 89 aa1.11□□□□□ -2.23
LIG4-203ENST00000442234 KRTAP5-5Q701N2 237 aaPredicted RBP1.11□□□□□ -2.23
LIG4-203ENST00000442234 SPRR2DP22532 72 aa1.11□□□□□ -2.23
LIG4-203ENST00000442234 MT4P47944 62 aa1.1□□□□□ -2.23
LIG4-203ENST00000442234 KRTAP4-4Q9BYR3 166 aa1.09□□□□□ -2.23
LIG4-203ENST00000442234 KRTAP9-6A8MVA2 160 aa1.08□□□□□ -2.24
LIG4-203ENST00000442234 KRTAP12-3P60328 96 aa1.07□□□□□ -2.24
LIG4-203ENST00000442234 KRTAP19-2Q3LHN2 52 aa1.07□□□□□ -2.24
LIG4-203ENST00000442234 LCE3EQ5T5B0 92 aa1.07□□□□□ -2.24
LIG4-203ENST00000442234 KRTAP19-6Q3LI70 58 aa1.05□□□□□ -2.24
LIG4-203ENST00000442234 KRTAP6-3Q3LI67 103 aa1.04□□□□□ -2.24
LIG4-203ENST00000442234 AHNAK2Q8IVF2 5795 aa1.04□□□□□ -2.24
LIG4-203ENST00000442234 KRTAP5-7Q6L8G8 165 aa1.04□□□□□ -2.24
LIG4-203ENST00000442234 KRTAP2-3P0C7H8 128 aa1.03□□□□□ -2.24
LIG4-203ENST00000442234 KRTAP2-4Q9BYR9 128 aa1.03□□□□□ -2.24
LIG4-203ENST00000442234 MUC19Q7Z5P9 8384 aa1.01□□□□□ -2.25
LIG4-203ENST00000442234 KRTAP2-1Q9BYU5 128 aa1□□□□□ -2.25
LIG4-203ENST00000442234 KRTAP12-4P60329 112 aa0.98□□□□□ -2.25
LIG4-203ENST00000442234 KRTAP5-1Q6L8H4 278 aa0.98□□□□□ -2.25
LIG4-203ENST00000442234 MT1BP07438 61 aa0.98□□□□□ -2.25
LIG4-203ENST00000442234 SPRR2GQ9BYE4 73 aa0.97□□□□□ -2.25
LIG4-203ENST00000442234 LCE3DQ9BYE3 92 aa0.96□□□□□ -2.26
LIG4-203ENST00000442234 KRTAP4-3Q9BYR4 195 aa0.96□□□□□ -2.26
LIG4-203ENST00000442234 KRTAP5-10Q6L8G5 202 aa0.94□□□□□ -2.26
LIG4-203ENST00000442234 KRTAP19-8Q3LI54 63 aa0.93□□□□□ -2.26
LIG4-203ENST00000442234 KRTAP19-5Q3LI72 72 aa0.93□□□□□ -2.26
LIG4-203ENST00000442234 MUC5ACP98088 5654 aa0.91□□□□□ -2.26
LIG4-203ENST00000442234 MT1XP80297 61 aa0.91□□□□□ -2.26
LIG4-203ENST00000442234 PRM1P04553 51 aa0.9□□□□□ -2.27
LIG4-203ENST00000442234 MT1GP13640 62 aa0.9□□□□□ -2.27
LIG4-203ENST00000442234 KRTAP19-3Q7Z4W3 81 aa0.85□□□□□ -2.27
LIG4-203ENST00000442234 LCE1BQ5T7P3 118 aa0.84□□□□□ -2.27
LIG4-203ENST00000442234 LCE1CQ5T751 118 aa0.83□□□□□ -2.28
LIG4-203ENST00000442234 MT1EP04732 61 aa0.81□□□□□ -2.28
LIG4-203ENST00000442234 MT1MQ8N339 61 aa0.81□□□□□ -2.28
LIG4-203ENST00000442234 MT1LQ93083 61 aa0.8□□□□□ -2.28
LIG4-203ENST00000442234 KRTAP19-7Q3SYF9 63 aa0.79□□□□□ -2.28
LIG4-203ENST00000442234 KRTAP6-2Q3LI66 62 aa0.77□□□□□ -2.29
LIG4-203ENST00000442234 MT1AP04731 61 aa0.75□□□□□ -2.29
LIG4-203ENST00000442234 KRTAP20-2Q3LI61 65 aa0.75□□□□□ -2.29
LIG4-203ENST00000442234 KRTAP6-1Q3LI64 71 aa0.72□□□□□ -2.29
LIG4-203ENST00000442234 PHGR1C9JFL3 82 aa0.64□□□□□ -2.31
LIG4-203ENST00000442234 KRTAP21-2Q3LI59 83 aa0.55□□□□□ -2.32
LIG4-203ENST00000442234 MUC16Q8WXI7 14507 aa0.55□□□□□ -2.32
LIG4-203ENST00000442234 KRTAP21-1Q3LI58 79 aa0.51□□□□□ -2.33
Retrieved 77 of 20,778 RNA–protein pairs in 72.6 ms