RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 A0A0D9SG42 100 aa1.45□□□□□ -2.18
CDC42BPA-207ENST00000441725 LRP1Q07954 4544 aaKnown RBP1.45□□□□□ -2.18
CDC42BPA-207ENST00000441725 FAT3Q8TDW7 4589 aa1.44□□□□□ -2.18
CDC42BPA-207ENST00000441725 TNXBP22105 4242 aa1.41□□□□□ -2.18
CDC42BPA-207ENST00000441725 DEFB4AO15263 64 aa1.4□□□□□ -2.19
CDC42BPA-207ENST00000441725 DEFB1P60022 68 aa1.4□□□□□ -2.19
CDC42BPA-207ENST00000441725 KRTAP20-1Q3LI63 56 aa1.4□□□□□ -2.19
CDC42BPA-207ENST00000441725 DEFB135Q30KP9 77 aa1.39□□□□□ -2.19
CDC42BPA-207ENST00000441725 RHPN1-AS1Q9BWJ2 59 aa1.39□□□□□ -2.19
CDC42BPA-207ENST00000441725 KRTAP5-7Q6L8G8 165 aa1.38□□□□□ -2.19
CDC42BPA-207ENST00000441725 NOP10Q9NPE3 64 aaKnown RBP1.38□□□□□ -2.19
CDC42BPA-207ENST00000441725 HTN1P15515 57 aa1.37□□□□□ -2.19
CDC42BPA-207ENST00000441725 LPAP08519 4548 aa1.37□□□□□ -2.19
CDC42BPA-207ENST00000441725 USH2AO75445 5202 aa1.37□□□□□ -2.19
CDC42BPA-207ENST00000441725 FCGBPQ9Y6R7 5405 aaPredicted RBP1.36□□□□□ -2.19
CDC42BPA-207ENST00000441725 HTN3P15516 51 aa1.36□□□□□ -2.19
CDC42BPA-207ENST00000441725 SMR3BP02814 79 aaPredicted RBP1.35□□□□□ -2.19
CDC42BPA-207ENST00000441725 KRTAP10-4P60372 401 aaPredicted RBP1.35□□□□□ -2.19
CDC42BPA-207ENST00000441725 SYNE2Q8WXH0 6885 aaKnown RBP1.33□□□□□ -2.2
CDC42BPA-207ENST00000441725 DNAH8Q96JB1 4490 aa1.33□□□□□ -2.2
CDC42BPA-207ENST00000441725 A0A096LPF7 62 aa1.32□□□□□ -2.2
CDC42BPA-207ENST00000441725 SPART-AS1P0CW21 52 aa1.32□□□□□ -2.2
CDC42BPA-207ENST00000441725 MT1HL1P0DM35 61 aa1.32□□□□□ -2.2
CDC42BPA-207ENST00000441725 MUC19Q7Z5P9 8384 aa1.32□□□□□ -2.2
CDC42BPA-207ENST00000441725 KMT2DO14686 5537 aa1.29□□□□□ -2.2
CDC42BPA-207ENST00000441725 MUC5ACP98088 5654 aa1.28□□□□□ -2.21
CDC42BPA-207ENST00000441725 MUC12Q9UKN1 5478 aa1.27□□□□□ -2.21
CDC42BPA-207ENST00000441725 M0QZ58 72 aa1.26□□□□□ -2.21
CDC42BPA-207ENST00000441725 KRTAP2-3P0C7H8 128 aa1.25□□□□□ -2.21
CDC42BPA-207ENST00000441725 KRTAP2-4Q9BYR9 128 aa1.25□□□□□ -2.21
CDC42BPA-207ENST00000441725 H3BNG1 76 aa1.24□□□□□ -2.21
CDC42BPA-207ENST00000441725 A0A096LNI7 61 aa1.23□□□□□ -2.21
CDC42BPA-207ENST00000441725 LINC01556Q5JQF7 62 aa1.23□□□□□ -2.21
CDC42BPA-207ENST00000441725 SPINK6Q6UWN8 80 aa1.21□□□□□ -2.22
CDC42BPA-207ENST00000441725 MUC17Q685J3 4493 aa1.21□□□□□ -2.22
CDC42BPA-207ENST00000441725 KRTAP21-2Q3LI59 83 aa1.19□□□□□ -2.22
CDC42BPA-207ENST00000441725 KRTAP2-1Q9BYU5 128 aa1.18□□□□□ -2.22
CDC42BPA-207ENST00000441725 MDN1Q9NU22 5596 aa1.18□□□□□ -2.22
CDC42BPA-207ENST00000441725 MT1HP80294 61 aa1.15□□□□□ -2.23
CDC42BPA-207ENST00000441725 TNP1P09430 55 aa1.13□□□□□ -2.23
CDC42BPA-207ENST00000441725 KRTAP5-10Q6L8G5 202 aa1.13□□□□□ -2.23
CDC42BPA-207ENST00000441725 M0R2T5 61 aa1.12□□□□□ -2.23
CDC42BPA-207ENST00000441725 KRTAP4-1Q9BYQ7 146 aa1.12□□□□□ -2.23
CDC42BPA-207ENST00000441725 KRTAP19-2Q3LHN2 52 aa1.11□□□□□ -2.23
CDC42BPA-207ENST00000441725 KRTAP19-6Q3LI70 58 aa1.11□□□□□ -2.23
CDC42BPA-207ENST00000441725 FLGP20930 4061 aaPredicted RBP1.07□□□□□ -2.24
CDC42BPA-207ENST00000441725 DSTQ03001 7570 aaKnown RBP1.06□□□□□ -2.24
CDC42BPA-207ENST00000441725 C9orf92A6NGG3 77 aa1.06□□□□□ -2.24
CDC42BPA-207ENST00000441725 PRM1P04553 51 aa1.04□□□□□ -2.24
CDC42BPA-207ENST00000441725 SPRR2EP22531 72 aa1.03□□□□□ -2.24
CDC42BPA-207ENST00000441725 SPRR2BP35325 72 aa1.03□□□□□ -2.24
CDC42BPA-207ENST00000441725 SPRR2AP35326 72 aa1.03□□□□□ -2.24
CDC42BPA-207ENST00000441725 SPRR2DP22532 72 aa1□□□□□ -2.25
CDC42BPA-207ENST00000441725 RPS29P62273 56 aaKnown RBP0.99□□□□□ -2.25
CDC42BPA-207ENST00000441725 KRTAP8-1Q8IUC2 63 aa0.99□□□□□ -2.25
CDC42BPA-207ENST00000441725 MT2AP02795 61 aa0.98□□□□□ -2.25
CDC42BPA-207ENST00000441725 MT1FP04733 61 aa0.97□□□□□ -2.25
CDC42BPA-207ENST00000441725 SPRR2FQ96RM1 72 aa0.96□□□□□ -2.26
CDC42BPA-207ENST00000441725 KRTAP19-3Q7Z4W3 81 aa0.94□□□□□ -2.26
CDC42BPA-207ENST00000441725 MT4P47944 62 aa0.93□□□□□ -2.26
CDC42BPA-207ENST00000441725 SYNE1Q8NF91 8797 aaKnown RBP0.88□□□□□ -2.27
CDC42BPA-207ENST00000441725 KRTAP19-5Q3LI72 72 aa0.86□□□□□ -2.27
CDC42BPA-207ENST00000441725 MT1BP07438 61 aa0.83□□□□□ -2.28
CDC42BPA-207ENST00000441725 KRTAP6-2Q3LI66 62 aa0.81□□□□□ -2.28
CDC42BPA-207ENST00000441725 MT1AP04731 61 aa0.81□□□□□ -2.28
CDC42BPA-207ENST00000441725 SPRR2GQ9BYE4 73 aa0.81□□□□□ -2.28
CDC42BPA-207ENST00000441725 KRTAP19-8Q3LI54 63 aa0.8□□□□□ -2.28
CDC42BPA-207ENST00000441725 MT1XP80297 61 aa0.78□□□□□ -2.28
CDC42BPA-207ENST00000441725 KRTAP21-1Q3LI58 79 aa0.78□□□□□ -2.28
CDC42BPA-207ENST00000441725 KRTAP20-2Q3LI61 65 aa0.77□□□□□ -2.29
CDC42BPA-207ENST00000441725 KRTAP19-7Q3SYF9 63 aa0.69□□□□□ -2.3
CDC42BPA-207ENST00000441725 MT1EP04732 61 aa0.69□□□□□ -2.3
CDC42BPA-207ENST00000441725 PHGR1C9JFL3 82 aa0.66□□□□□ -2.3
CDC42BPA-207ENST00000441725 MT1LQ93083 61 aa0.66□□□□□ -2.3
CDC42BPA-207ENST00000441725 MT1GP13640 62 aa0.65□□□□□ -2.31
CDC42BPA-207ENST00000441725 MT1MQ8N339 61 aa0.65□□□□□ -2.31
CDC42BPA-207ENST00000441725 MUC16Q8WXI7 14507 aa0.6□□□□□ -2.31
CDC42BPA-207ENST00000441725 KRTAP6-1Q3LI64 71 aa0.57□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 109.7 ms