RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 SPRR2FQ96RM1 72 aa6.86□□□□□ -1.31
SNX17-203ENST00000440760 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.84□□□□□ -1.31
SNX17-203ENST00000440760 MT1LQ93083 61 aa6.8□□□□□ -1.32
SNX17-203ENST00000440760 KRTAP5-9P26371 169 aa6.73□□□□□ -1.33
SNX17-203ENST00000440760 MDN1Q9NU22 5596 aa6.67□□□□□ -1.34
SNX17-203ENST00000440760 LCE3CQ5T5A8 94 aa6.67□□□□□ -1.34
SNX17-203ENST00000440760 KRTAP4-7Q9BYR0 210 aa6.67□□□□□ -1.34
SNX17-203ENST00000440760 KRTAP19-3Q7Z4W3 81 aa6.66□□□□□ -1.34
SNX17-203ENST00000440760 KRTAP6-3Q3LI67 103 aa6.61□□□□□ -1.35
SNX17-203ENST00000440760 MT1GP13640 62 aa6.55□□□□□ -1.36
SNX17-203ENST00000440760 LCE5AQ5TCM9 118 aa6.55□□□□□ -1.36
SNX17-203ENST00000440760 MT1MQ8N339 61 aa6.55□□□□□ -1.36
SNX17-203ENST00000440760 LCE1AQ5T7P2 110 aa6.54□□□□□ -1.36
SNX17-203ENST00000440760 SPRR2EP22531 72 aa6.51□□□□□ -1.37
SNX17-203ENST00000440760 SPRR2BP35325 72 aa6.51□□□□□ -1.37
SNX17-203ENST00000440760 SPRR2AP35326 72 aa6.51□□□□□ -1.37
SNX17-203ENST00000440760 KRTAP4-3Q9BYR4 195 aa6.51□□□□□ -1.37
SNX17-203ENST00000440760 KRTAP19-4Q3LI73 84 aa6.49□□□□□ -1.37
SNX17-203ENST00000440760 KRTAP9-7A8MTY7 169 aa6.47□□□□□ -1.37
SNX17-203ENST00000440760 KRTAP9-6A8MVA2 160 aa6.38□□□□□ -1.39
SNX17-203ENST00000440760 DSTQ03001 7570 aaKnown RBP6.37□□□□□ -1.39
SNX17-203ENST00000440760 INE1O15225 51 aa6.33□□□□□ -1.4
SNX17-203ENST00000440760 NEBP20929 6669 aa6.3□□□□□ -1.4
SNX17-203ENST00000440760 LOC100996750A0A140TA64 210 aa6.26□□□□□ -1.41
SNX17-203ENST00000440760 SPRR2DP22532 72 aa6.26□□□□□ -1.41
SNX17-203ENST00000440760 LCE3BQ5TA77 95 aa6.02□□□□□ -1.45
SNX17-203ENST00000440760 KRTAP5-5Q701N2 237 aaPredicted RBP5.89□□□□□ -1.47
SNX17-203ENST00000440760 KRTAP2-3P0C7H8 128 aa5.79□□□□□ -1.48
SNX17-203ENST00000440760 KRTAP2-4Q9BYR9 128 aa5.79□□□□□ -1.48
SNX17-203ENST00000440760 KRTAP2-1Q9BYU5 128 aa5.79□□□□□ -1.48
SNX17-203ENST00000440760 KRTAP6-1Q3LI64 71 aa5.76□□□□□ -1.49
SNX17-203ENST00000440760 MT1AP04731 61 aa5.75□□□□□ -1.49
SNX17-203ENST00000440760 KRTAP20-1Q3LI63 56 aa5.72□□□□□ -1.49
SNX17-203ENST00000440760 SYNE1Q8NF91 8797 aaKnown RBP5.69□□□□□ -1.5
SNX17-203ENST00000440760 KRTAP2-2Q9BYT5 123 aa5.66□□□□□ -1.5
SNX17-203ENST00000440760 KRTAP5-4Q6L8H1 288 aa5.61□□□□□ -1.51
SNX17-203ENST00000440760 MT4P47944 62 aa5.49□□□□□ -1.53
SNX17-203ENST00000440760 LCE4AQ5TA78 99 aa5.48□□□□□ -1.53
SNX17-203ENST00000440760 KRTAP9-4Q9BYQ2 154 aa5.46□□□□□ -1.54
SNX17-203ENST00000440760 KRTAP4-9Q9BYQ8 210 aa5.46□□□□□ -1.54
SNX17-203ENST00000440760 KRTAP12-4P60329 112 aa5.44□□□□□ -1.54
SNX17-203ENST00000440760 KRTAP4-6Q9BYQ5 205 aa5.44□□□□□ -1.54
SNX17-203ENST00000440760 HMCN1Q96RW7 5635 aa5.38□□□□□ -1.55
SNX17-203ENST00000440760 LCE1DQ5T752 114 aa5.37□□□□□ -1.55
SNX17-203ENST00000440760 KRTAP6-2Q3LI66 62 aa5.31□□□□□ -1.56
SNX17-203ENST00000440760 KRTAP20-2Q3LI61 65 aa5.29□□□□□ -1.56
SNX17-203ENST00000440760 MT3P25713 68 aa5.18□□□□□ -1.58
SNX17-203ENST00000440760 KRTAP5-2Q701N4 177 aa5.09□□□□□ -1.59
SNX17-203ENST00000440760 KRTAP5-3Q6L8H2 238 aa5.08□□□□□ -1.6
SNX17-203ENST00000440760 OBSCNQ5VST9 7968 aa5□□□□□ -1.61
SNX17-203ENST00000440760 LCE3DQ9BYE3 92 aa4.99□□□□□ -1.61
SNX17-203ENST00000440760 LCE3EQ5T5B0 92 aa4.84□□□□□ -1.64
SNX17-203ENST00000440760 AHNAK2Q8IVF2 5795 aa4.76□□□□□ -1.65
SNX17-203ENST00000440760 KRTAP4-11Q9BYQ6 195 aa4.58□□□□□ -1.68
SNX17-203ENST00000440760 LCE1EQ5T753 118 aa4.47□□□□□ -1.69
SNX17-203ENST00000440760 PRM1P04553 51 aa4.45□□□□□ -1.7
SNX17-203ENST00000440760 KRTAP5-10Q6L8G5 202 aa4.45□□□□□ -1.7
SNX17-203ENST00000440760 KRTAP5-1Q6L8H4 278 aa4.43□□□□□ -1.7
SNX17-203ENST00000440760 KRTAP5-8O75690 187 aa4.42□□□□□ -1.7
SNX17-203ENST00000440760 MUC5ACP98088 5654 aa4.33□□□□□ -1.72
SNX17-203ENST00000440760 LCE1BQ5T7P3 118 aa4.32□□□□□ -1.72
SNX17-203ENST00000440760 GPR98Q8WXG9 6306 aa4.31□□□□□ -1.72
SNX17-203ENST00000440760 KRTAP4-2Q9BYR5 136 aa4.25□□□□□ -1.73
SNX17-203ENST00000440760 KRTAP5-7Q6L8G8 165 aa4.21□□□□□ -1.74
SNX17-203ENST00000440760 LCE1CQ5T751 118 aa4.19□□□□□ -1.74
SNX17-203ENST00000440760 KRTAP9-9Q9BYP9 154 aa3.95□□□□□ -1.78
SNX17-203ENST00000440760 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.91□□□□□ -1.78
SNX17-203ENST00000440760 MUC5BQ9HC84 5762 aaPredicted RBP3.88□□□□□ -1.79
SNX17-203ENST00000440760 KRTAP21-2Q3LI59 83 aa3.75□□□□□ -1.81
SNX17-203ENST00000440760 KRTAP5-11Q6L8G4 156 aa3.71□□□□□ -1.82
SNX17-203ENST00000440760 KRTAP4-12Q9BQ66 201 aa3.62□□□□□ -1.83
SNX17-203ENST00000440760 AHNAKQ09666 5890 aaKnown RBP3.58□□□□□ -1.84
SNX17-203ENST00000440760 KRTAP4-4Q9BYR3 166 aa3.42□□□□□ -1.86
SNX17-203ENST00000440760 LCE1FQ5T754 118 aa3.29□□□□□ -1.88
SNX17-203ENST00000440760 PHGR1C9JFL3 82 aa3.2□□□□□ -1.9
SNX17-203ENST00000440760 MUC19Q7Z5P9 8384 aa2.99□□□□□ -1.93
SNX17-203ENST00000440760 KRTAP21-1Q3LI58 79 aa2.89□□□□□ -1.95
SNX17-203ENST00000440760 MUC16Q8WXI7 14507 aa2.09□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 169.4 ms