RNA–Protein interactions for RNA: ENST00000440088.5

APTR-204, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best) BASIC

Gene APTR, Length 2,029 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-204ENST00000440088 KRTAP5-9P26371 169 aa6.91□□□□□ -1.3
APTR-204ENST00000440088 KRTAP19-3Q7Z4W3 81 aa6.86□□□□□ -1.31
APTR-204ENST00000440088 MT1GP13640 62 aa6.81□□□□□ -1.32
APTR-204ENST00000440088 KRTAP6-3Q3LI67 103 aa6.77□□□□□ -1.32
APTR-204ENST00000440088 KRTAP4-7Q9BYR0 210 aa6.77□□□□□ -1.32
APTR-204ENST00000440088 LUZP6Q538Z0 58 aa6.75□□□□□ -1.33
APTR-204ENST00000440088 LCE5AQ5TCM9 118 aa6.74□□□□□ -1.33
APTR-204ENST00000440088 MT1MQ8N339 61 aa6.71□□□□□ -1.33
APTR-204ENST00000440088 MDN1Q9NU22 5596 aa6.7□□□□□ -1.34
APTR-204ENST00000440088 LCE1AQ5T7P2 110 aa6.68□□□□□ -1.34
APTR-204ENST00000440088 SPRR2EP22531 72 aa6.64□□□□□ -1.35
APTR-204ENST00000440088 SPRR2BP35325 72 aa6.64□□□□□ -1.35
APTR-204ENST00000440088 SPRR2AP35326 72 aa6.64□□□□□ -1.35
APTR-204ENST00000440088 KRTAP4-3Q9BYR4 195 aa6.58□□□□□ -1.36
APTR-204ENST00000440088 NDUFAF8A1L188 74 aa6.57□□□□□ -1.36
APTR-204ENST00000440088 KRTAP9-7A8MTY7 169 aa6.55□□□□□ -1.36
APTR-204ENST00000440088 KRTAP9-6A8MVA2 160 aa6.54□□□□□ -1.36
APTR-204ENST00000440088 H3BS24 57 aa6.54□□□□□ -1.36
APTR-204ENST00000440088 DSTQ03001 7570 aaKnown RBP6.41□□□□□ -1.38
APTR-204ENST00000440088 SPRR2DP22532 72 aa6.39□□□□□ -1.39
APTR-204ENST00000440088 LOC100996750A0A140TA64 210 aa6.37□□□□□ -1.39
APTR-204ENST00000440088 NEBP20929 6669 aa6.27□□□□□ -1.41
APTR-204ENST00000440088 LCE3BQ5TA77 95 aa6.14□□□□□ -1.43
APTR-204ENST00000440088 KRTAP5-5Q701N2 237 aaPredicted RBP6.05□□□□□ -1.44
APTR-204ENST00000440088 KRTAP2-3P0C7H8 128 aa6.04□□□□□ -1.44
APTR-204ENST00000440088 KRTAP2-4Q9BYR9 128 aa6.04□□□□□ -1.44
APTR-204ENST00000440088 KRTAP2-1Q9BYU5 128 aa6.04□□□□□ -1.44
APTR-204ENST00000440088 KRTAP4-6Q9BYQ5 205 aa6.03□□□□□ -1.44
APTR-204ENST00000440088 MT1AP04731 61 aa5.94□□□□□ -1.46
APTR-204ENST00000440088 KRTAP6-1Q3LI64 71 aa5.89□□□□□ -1.47
APTR-204ENST00000440088 KRTAP20-1Q3LI63 56 aa5.81□□□□□ -1.48
APTR-204ENST00000440088 KRTAP2-2Q9BYT5 123 aa5.81□□□□□ -1.48
APTR-204ENST00000440088 A0A0A0MQY5 61 aa5.79□□□□□ -1.48
APTR-204ENST00000440088 KRTAP5-4Q6L8H1 288 aa5.77□□□□□ -1.49
APTR-204ENST00000440088 SYNE1Q8NF91 8797 aaKnown RBP5.73□□□□□ -1.49
APTR-204ENST00000440088 LCE4AQ5TA78 99 aa5.67□□□□□ -1.5
APTR-204ENST00000440088 KRTAP12-4P60329 112 aa5.64□□□□□ -1.51
APTR-204ENST00000440088 KRTAP9-4Q9BYQ2 154 aa5.64□□□□□ -1.51
APTR-204ENST00000440088 MT4P47944 62 aa5.55□□□□□ -1.52
APTR-204ENST00000440088 KRTAP4-9Q9BYQ8 210 aa5.48□□□□□ -1.53
APTR-204ENST00000440088 LCE1DQ5T752 114 aa5.45□□□□□ -1.54
APTR-204ENST00000440088 KRTAP6-2Q3LI66 62 aa5.43□□□□□ -1.54
APTR-204ENST00000440088 INE1O15225 51 aa5.41□□□□□ -1.54
APTR-204ENST00000440088 KRTAP20-2Q3LI61 65 aa5.4□□□□□ -1.54
APTR-204ENST00000440088 MT3P25713 68 aa5.4□□□□□ -1.55
APTR-204ENST00000440088 HMCN1Q96RW7 5635 aa5.38□□□□□ -1.55
APTR-204ENST00000440088 KRTAP4-12Q9BQ66 201 aa5.34□□□□□ -1.55
APTR-204ENST00000440088 KRTAP5-2Q701N4 177 aa5.23□□□□□ -1.57
APTR-204ENST00000440088 LCE3DQ9BYE3 92 aa5.21□□□□□ -1.57
APTR-204ENST00000440088 KRTAP5-3Q6L8H2 238 aa5.21□□□□□ -1.58
APTR-204ENST00000440088 KRTAP9-9Q9BYP9 154 aa5.16□□□□□ -1.58
APTR-204ENST00000440088 LCE3EQ5T5B0 92 aa5.06□□□□□ -1.6
APTR-204ENST00000440088 OBSCNQ5VST9 7968 aa5.02□□□□□ -1.61
APTR-204ENST00000440088 AHNAK2Q8IVF2 5795 aa4.72□□□□□ -1.65
APTR-204ENST00000440088 KRTAP4-11Q9BYQ6 195 aa4.69□□□□□ -1.66
APTR-204ENST00000440088 KRTAP4-2Q9BYR5 136 aa4.69□□□□□ -1.66
APTR-204ENST00000440088 LCE1EQ5T753 118 aa4.68□□□□□ -1.66
APTR-204ENST00000440088 KRTAP5-1Q6L8H4 278 aa4.53□□□□□ -1.68
APTR-204ENST00000440088 KRTAP5-10Q6L8G5 202 aa4.5□□□□□ -1.69
APTR-204ENST00000440088 KRTAP5-8O75690 187 aa4.5□□□□□ -1.69
APTR-204ENST00000440088 PRM1P04553 51 aa4.41□□□□□ -1.7
APTR-204ENST00000440088 LCE1BQ5T7P3 118 aa4.4□□□□□ -1.7
APTR-204ENST00000440088 LCE1CQ5T751 118 aa4.36□□□□□ -1.71
APTR-204ENST00000440088 KRTAP5-7Q6L8G8 165 aa4.36□□□□□ -1.71
APTR-204ENST00000440088 MUC5ACP98088 5654 aa4.34□□□□□ -1.71
APTR-204ENST00000440088 GPR98Q8WXG9 6306 aa4.22□□□□□ -1.73
APTR-204ENST00000440088 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.08□□□□□ -1.76
APTR-204ENST00000440088 MUC5BQ9HC84 5762 aaPredicted RBP3.86□□□□□ -1.79
APTR-204ENST00000440088 KRTAP21-2Q3LI59 83 aa3.85□□□□□ -1.79
APTR-204ENST00000440088 KRTAP5-11Q6L8G4 156 aa3.85□□□□□ -1.79
APTR-204ENST00000440088 LCE1FQ5T754 118 aa3.61□□□□□ -1.83
APTR-204ENST00000440088 AHNAKQ09666 5890 aaKnown RBP3.52□□□□□ -1.85
APTR-204ENST00000440088 KRTAP4-4Q9BYR3 166 aa3.43□□□□□ -1.86
APTR-204ENST00000440088 PHGR1C9JFL3 82 aa3.31□□□□□ -1.88
APTR-204ENST00000440088 MUC19Q7Z5P9 8384 aa3□□□□□ -1.93
APTR-204ENST00000440088 KRTAP21-1Q3LI58 79 aa2.69□□□□□ -1.98
APTR-204ENST00000440088 MUC16Q8WXI7 14507 aa2.11□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 549.5 ms