RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 LOC100996750A0A140TA64 210 aa5.56□□□□□ -1.52
TTC3-209ENST00000438055 FCGBPQ9Y6R7 5405 aaPredicted RBP5.56□□□□□ -1.52
TTC3-209ENST00000438055 KRTAP19-4Q3LI73 84 aa5.56□□□□□ -1.52
TTC3-209ENST00000438055 MT1GP13640 62 aa5.55□□□□□ -1.52
TTC3-209ENST00000438055 KRTAP2-3P0C7H8 128 aa5.54□□□□□ -1.52
TTC3-209ENST00000438055 KRTAP2-4Q9BYR9 128 aa5.54□□□□□ -1.52
TTC3-209ENST00000438055 KRTAP2-1Q9BYU5 128 aa5.54□□□□□ -1.52
TTC3-209ENST00000438055 DSTQ03001 7570 aaKnown RBP5.54□□□□□ -1.52
TTC3-209ENST00000438055 SPRR2FQ96RM1 72 aa5.43□□□□□ -1.54
TTC3-209ENST00000438055 LCE2DQ5TA82 110 aaPredicted RBP5.42□□□□□ -1.54
TTC3-209ENST00000438055 KRTAP19-3Q7Z4W3 81 aa5.42□□□□□ -1.54
TTC3-209ENST00000438055 MT1MQ8N339 61 aa5.41□□□□□ -1.54
TTC3-209ENST00000438055 SYNE1Q8NF91 8797 aaKnown RBP5.29□□□□□ -1.56
TTC3-209ENST00000438055 LCE3BQ5TA77 95 aa5.19□□□□□ -1.58
TTC3-209ENST00000438055 MACF1Q9UPN3 7388 aaKnown RBP5.19□□□□□ -1.58
TTC3-209ENST00000438055 KRTAP12-4P60329 112 aa5.17□□□□□ -1.58
TTC3-209ENST00000438055 LCE5AQ5TCM9 118 aa5.14□□□□□ -1.59
TTC3-209ENST00000438055 SYNE2Q8WXH0 6885 aaKnown RBP5.09□□□□□ -1.6
TTC3-209ENST00000438055 KRTAP4-9Q9BYQ8 210 aa5.05□□□□□ -1.6
TTC3-209ENST00000438055 MDN1Q9NU22 5596 aa5.03□□□□□ -1.6
TTC3-209ENST00000438055 OBSCNQ5VST9 7968 aa5.01□□□□□ -1.61
TTC3-209ENST00000438055 KRTAP6-1Q3LI64 71 aa4.93□□□□□ -1.62
TTC3-209ENST00000438055 KRTAP9-2Q9BYQ4 174 aa4.93□□□□□ -1.62
TTC3-209ENST00000438055 SPRR2EP22531 72 aa4.9□□□□□ -1.62
TTC3-209ENST00000438055 SPRR2BP35325 72 aa4.9□□□□□ -1.62
TTC3-209ENST00000438055 SPRR2AP35326 72 aa4.9□□□□□ -1.62
TTC3-209ENST00000438055 LCE1AQ5T7P2 110 aa4.85□□□□□ -1.63
TTC3-209ENST00000438055 MT1AP04731 61 aa4.83□□□□□ -1.64
TTC3-209ENST00000438055 LCE3DQ9BYE3 92 aa4.82□□□□□ -1.64
TTC3-209ENST00000438055 LCE3EQ5T5B0 92 aa4.73□□□□□ -1.65
TTC3-209ENST00000438055 SPRR2DP22532 72 aa4.68□□□□□ -1.66
TTC3-209ENST00000438055 KRTAP5-9P26371 169 aa4.67□□□□□ -1.66
TTC3-209ENST00000438055 KRTAP9-7A8MTY7 169 aa4.59□□□□□ -1.68
TTC3-209ENST00000438055 KRTAP5-5Q701N2 237 aaPredicted RBP4.57□□□□□ -1.68
TTC3-209ENST00000438055 PRM1P04553 51 aa4.57□□□□□ -1.68
TTC3-209ENST00000438055 KRTAP9-4Q9BYQ2 154 aa4.53□□□□□ -1.68
TTC3-209ENST00000438055 KRTAP6-2Q3LI66 62 aa4.48□□□□□ -1.69
TTC3-209ENST00000438055 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.42□□□□□ -1.7
TTC3-209ENST00000438055 MT3P25713 68 aa4.42□□□□□ -1.7
TTC3-209ENST00000438055 KRTAP6-3Q3LI67 103 aa4.38□□□□□ -1.71
TTC3-209ENST00000438055 KRTAP9-6A0A140TA67 174 aa4.28□□□□□ -1.72
TTC3-209ENST00000438055 MT4P47944 62 aa4.23□□□□□ -1.73
TTC3-209ENST00000438055 KRTAP4-6Q9BYQ5 205 aa4.12□□□□□ -1.75
TTC3-209ENST00000438055 NEBP20929 6669 aa4.11□□□□□ -1.75
TTC3-209ENST00000438055 KRTAP5-4Q6L8H1 288 aa4□□□□□ -1.77
TTC3-209ENST00000438055 KRTAP20-2Q3LI61 65 aa3.92□□□□□ -1.78
TTC3-209ENST00000438055 KRTAP2-2Q9BYT5 123 aa3.91□□□□□ -1.78
TTC3-209ENST00000438055 LCE1DQ5T752 114 aa3.9□□□□□ -1.79
TTC3-209ENST00000438055 LCE4AQ5TA78 99 aa3.87□□□□□ -1.79
TTC3-209ENST00000438055 HMCN1Q96RW7 5635 aa3.86□□□□□ -1.79
TTC3-209ENST00000438055 LCE1BQ5T7P3 118 aa3.78□□□□□ -1.8
TTC3-209ENST00000438055 KRTAP5-2Q701N4 177 aa3.72□□□□□ -1.81
TTC3-209ENST00000438055 MUC5ACP98088 5654 aa3.69□□□□□ -1.82
TTC3-209ENST00000438055 KRTAP20-1Q3LI63 56 aa3.66□□□□□ -1.82
TTC3-209ENST00000438055 KRTAP5-3Q6L8H2 238 aa3.61□□□□□ -1.83
TTC3-209ENST00000438055 KRTAP4-11Q9BYQ6 195 aa3.49□□□□□ -1.85
TTC3-209ENST00000438055 LCE1EQ5T753 118 aa3.43□□□□□ -1.86
TTC3-209ENST00000438055 KRTAP5-10Q6L8G5 202 aa3.37□□□□□ -1.87
TTC3-209ENST00000438055 KRTAP4-2Q9BYR5 136 aa3.3□□□□□ -1.88
TTC3-209ENST00000438055 LCE1CQ5T751 118 aa3.25□□□□□ -1.89
TTC3-209ENST00000438055 KRTAP5-1Q6L8H4 278 aa3.23□□□□□ -1.89
TTC3-209ENST00000438055 MUC19Q7Z5P9 8384 aa3.2□□□□□ -1.9
TTC3-209ENST00000438055 KRTAP4-4Q9BYR3 166 aa3.11□□□□□ -1.91
TTC3-209ENST00000438055 AHNAK2Q8IVF2 5795 aa3.09□□□□□ -1.91
TTC3-209ENST00000438055 KRTAP21-2Q3LI59 83 aa3.08□□□□□ -1.92
TTC3-209ENST00000438055 KRTAP5-8O75690 187 aa3.04□□□□□ -1.92
TTC3-209ENST00000438055 MUC5BQ9HC84 5762 aaPredicted RBP2.97□□□□□ -1.93
TTC3-209ENST00000438055 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.96□□□□□ -1.94
TTC3-209ENST00000438055 KRTAP4-12Q9BQ66 201 aa2.95□□□□□ -1.94
TTC3-209ENST00000438055 KRTAP5-7Q6L8G8 165 aa2.87□□□□□ -1.95
TTC3-209ENST00000438055 KRTAP5-11Q6L8G4 156 aa2.79□□□□□ -1.96
TTC3-209ENST00000438055 KRTAP9-9Q9BYP9 154 aa2.73□□□□□ -1.97
TTC3-209ENST00000438055 GPR98Q8WXG9 6306 aa2.72□□□□□ -1.97
TTC3-209ENST00000438055 KRTAP21-1Q3LI58 79 aa2.66□□□□□ -1.98
TTC3-209ENST00000438055 LCE1FQ5T754 118 aa2.65□□□□□ -1.98
TTC3-209ENST00000438055 PHGR1C9JFL3 82 aa2.42□□□□□ -2.02
TTC3-209ENST00000438055 AHNAKQ09666 5890 aaKnown RBP2.31□□□□□ -2.04
TTC3-209ENST00000438055 MUC16Q8WXI7 14507 aa1.58□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 84.8 ms